EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006039 (Gene tree)
Gene ID: 111841345
Gene Symbol: parp1
Alias: -
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 20387 bases
Position: chrPGUA01000084.1:1774376-1794762
Accession: 111841345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021770	PARP	PF00644.20	3.4e-73	1	1
ENSPKIP00000021872	PARP	PF00644.20	3.5e-73	1	1
ENSPKIP00000021941	PARP	PF00644.20	3.8e-73	1	1
ENSPKIP00000021825	PARP	PF00644.20	9.6e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002413	-	4300	-	ENSPKIP00000021770	968 (aa)	-	-
ENSPKIT00000002517	-	4545	-	ENSPKIP00000021872	1011 (aa)	XP_023662803	UPI000CD661B8
ENSPKIT00000002592	-	2979	-	ENSPKIP00000021941	992 (aa)	-	-
ENSPKIT00000002469	-	5769	-	ENSPKIP00000021825	926 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006039's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03410	Base excision repair	KEGG
pki04210	Apoptosis	KEGG
pki04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006039's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006039	parp1	52	41.553	ENSPKIG00000007938	parp2	89	41.553
ENSPKIG00000006039	parp1	53	31.550	ENSPKIG00000004678	parp3	88	33.933

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006039	parp1	100	71.246	ENSG00000143799	PARP1	100	70.629	Homo_sapiens
ENSPKIG00000006039	parp1	100	81.693	ENSAPOG00000006414	parp1	100	81.496	Acanthochromis_polyacanthus
ENSPKIG00000006039	parp1	100	69.898	ENSAMEG00000014451	PARP1	100	69.411	Ailuropoda_melanoleuca
ENSPKIG00000006039	parp1	100	82.515	ENSACIG00000005651	parp1	100	81.836	Amphilophus_citrinellus
ENSPKIG00000006039	parp1	100	82.382	ENSAOCG00000021005	parp1	100	82.185	Amphiprion_ocellaris
ENSPKIG00000006039	parp1	100	82.382	ENSAPEG00000004784	parp1	100	82.185	Amphiprion_percula
ENSPKIG00000006039	parp1	100	81.693	ENSATEG00000010457	parp1	100	81.496	Anabas_testudineus
ENSPKIG00000006039	parp1	90	73.025	ENSAPLG00000014039	PARP1	99	72.976	Anas_platyrhynchos
ENSPKIG00000006039	parp1	100	71.190	ENSACAG00000006189	PARP1	100	71.190	Anolis_carolinensis
ENSPKIG00000006039	parp1	100	70.727	ENSANAG00000032699	PARP1	100	70.530	Aotus_nancymaae
ENSPKIG00000006039	parp1	100	83.350	ENSACLG00000015489	parp1	100	82.725	Astatotilapia_calliptera
ENSPKIG00000006039	parp1	100	82.076	ENSAMXG00000006465	parp1	100	82.566	Astyanax_mexicanus
ENSPKIG00000006039	parp1	100	68.787	ENSBTAG00000000837	PARP1	100	68.235	Bos_taurus
ENSPKIG00000006039	parp1	83	42.557	WBGene00004049	parp-1	100	45.594	Caenorhabditis_elegans
ENSPKIG00000006039	parp1	100	70.629	ENSCJAG00000012831	PARP1	100	70.432	Callithrix_jacchus
ENSPKIG00000006039	parp1	100	69.538	ENSCAFG00000016089	PARP1	100	69.436	Canis_familiaris
ENSPKIG00000006039	parp1	100	70.334	ENSCAFG00020001660	PARP1	100	69.941	Canis_lupus_dingo
ENSPKIG00000006039	parp1	100	69.412	ENSCHIG00000018072	PARP1	100	68.824	Capra_hircus
ENSPKIG00000006039	parp1	98	71.943	ENSTSYG00000003699	PARP1	99	71.366	Carlito_syrichta
ENSPKIG00000006039	parp1	100	58.111	ENSCAPG00000011113	-	99	57.503	Cavia_aperea
ENSPKIG00000006039	parp1	100	69.813	ENSCPOG00000015643	-	100	69.617	Cavia_porcellus
ENSPKIG00000006039	parp1	100	70.923	ENSCCAG00000033484	PARP1	100	70.236	Cebus_capucinus
ENSPKIG00000006039	parp1	100	70.629	ENSCATG00000038981	PARP1	100	70.039	Cercocebus_atys
ENSPKIG00000006039	parp1	100	68.891	ENSCLAG00000006637	PARP1	99	69.041	Chinchilla_lanigera
ENSPKIG00000006039	parp1	62	88.372	ENSCHOG00000003539	PARP1	57	88.372	Choloepus_hoffmanni
ENSPKIG00000006039	parp1	100	72.410	ENSCPBG00000011958	PARP1	99	72.628	Chrysemys_picta_bellii
ENSPKIG00000006039	parp1	100	69.744	ENSCANG00000041340	PARP1	100	69.498	Colobus_angolensis_palliatus
ENSPKIG00000006039	parp1	100	69.646	ENSCGRG00001020559	Parp1	100	69.450	Cricetulus_griseus_chok1gshd
ENSPKIG00000006039	parp1	100	69.538	ENSCGRG00000004864	Parp1	100	69.396	Cricetulus_griseus_crigri
ENSPKIG00000006039	parp1	97	85.631	ENSCSEG00000020665	parp1	100	85.631	Cynoglossus_semilaevis
ENSPKIG00000006039	parp1	100	81.006	ENSCVAG00000021372	parp1	99	81.006	Cyprinodon_variegatus
ENSPKIG00000006039	parp1	100	83.121	ENSDARG00000019529	parp1	100	82.891	Danio_rerio
ENSPKIG00000006039	parp1	100	69.333	ENSDNOG00000012059	PARP1	100	69.538	Dasypus_novemcinctus
ENSPKIG00000006039	parp1	100	68.782	ENSDORG00000005234	Parp1	100	68.373	Dipodomys_ordii
ENSPKIG00000006039	parp1	99	42.045	FBgn0010247	Parp	99	42.045	Drosophila_melanogaster
ENSPKIG00000006039	parp1	86	88.372	ENSETEG00000013254	PARP1	79	88.372	Echinops_telfairi
ENSPKIG00000006039	parp1	100	58.475	ENSEBUG00000005820	parp1	100	58.628	Eptatretus_burgeri
ENSPKIG00000006039	parp1	100	69.989	ENSEASG00005013275	PARP1	99	70.130	Equus_asinus_asinus
ENSPKIG00000006039	parp1	100	70.530	ENSECAG00000019207	PARP1	100	70.432	Equus_caballus
ENSPKIG00000006039	parp1	100	68.131	ENSEEUG00000012253	PARP1	99	68.473	Erinaceus_europaeus
ENSPKIG00000006039	parp1	99	83.193	ENSELUG00000017336	parp1	100	81.306	Esox_lucius
ENSPKIG00000006039	parp1	100	69.908	ENSFCAG00000005777	PARP1	100	69.583	Felis_catus
ENSPKIG00000006039	parp1	100	72.793	ENSFALG00000011578	PARP1	100	72.951	Ficedula_albicollis
ENSPKIG00000006039	parp1	100	68.583	ENSFDAG00000017662	PARP1	100	68.443	Fukomys_damarensis
ENSPKIG00000006039	parp1	100	80.924	ENSFHEG00000001117	parp1	100	81.121	Fundulus_heteroclitus
ENSPKIG00000006039	parp1	100	79.835	ENSGMOG00000014929	parp1	100	79.882	Gadus_morhua
ENSPKIG00000006039	parp1	100	73.333	ENSGALG00000009228	PARP1	99	73.518	Gallus_gallus
ENSPKIG00000006039	parp1	100	80.433	ENSGAFG00000010450	parp1	100	80.433	Gambusia_affinis
ENSPKIG00000006039	parp1	100	80.980	ENSGACG00000011280	parp1	100	80.452	Gasterosteus_aculeatus
ENSPKIG00000006039	parp1	100	72.279	ENSGAGG00000010066	PARP1	99	72.799	Gopherus_agassizii
ENSPKIG00000006039	parp1	100	70.952	ENSGGOG00000006308	PARP1	100	70.334	Gorilla_gorilla
ENSPKIG00000006039	parp1	100	83.399	ENSHBUG00000010490	parp1	100	82.579	Haplochromis_burtoni
ENSPKIG00000006039	parp1	100	69.601	ENSHGLG00000003992	PARP1	93	69.089	Heterocephalus_glaber_female
ENSPKIG00000006039	parp1	100	69.601	ENSHGLG00100016965	PARP1	93	69.089	Heterocephalus_glaber_male
ENSPKIG00000006039	parp1	100	79.138	ENSHCOG00000011619	parp1	100	79.138	Hippocampus_comes
ENSPKIG00000006039	parp1	100	81.623	ENSIPUG00000020250	parp1	100	81.738	Ictalurus_punctatus
ENSPKIG00000006039	parp1	100	70.923	ENSSTOG00000016000	PARP1	100	70.727	Ictidomys_tridecemlineatus
ENSPKIG00000006039	parp1	100	69.578	ENSJJAG00000023497	Parp1	100	69.548	Jaculus_jaculus
ENSPKIG00000006039	parp1	100	80.433	ENSKMAG00000011627	parp1	100	80.433	Kryptolebias_marmoratus
ENSPKIG00000006039	parp1	100	82.167	ENSLBEG00000013376	parp1	100	81.970	Labrus_bergylta
ENSPKIG00000006039	parp1	99	57.324	ENSLACG00000002735	PARP1	99	57.910	Latimeria_chalumnae
ENSPKIG00000006039	parp1	100	81.219	ENSLOCG00000015798	parp1	100	81.434	Lepisosteus_oculatus
ENSPKIG00000006039	parp1	100	67.824	ENSLAFG00000007830	PARP1	100	67.758	Loxodonta_africana
ENSPKIG00000006039	parp1	100	70.629	ENSMFAG00000002526	PARP1	100	70.039	Macaca_fascicularis
ENSPKIG00000006039	parp1	100	70.727	ENSMMUG00000021820	PARP1	100	70.138	Macaca_mulatta
ENSPKIG00000006039	parp1	100	70.629	ENSMNEG00000034074	PARP1	100	70.039	Macaca_nemestrina
ENSPKIG00000006039	parp1	100	69.882	ENSMLEG00000012344	PARP1	100	68.168	Mandrillus_leucophaeus
ENSPKIG00000006039	parp1	100	82.725	ENSMAMG00000020652	parp1	100	82.167	Mastacembelus_armatus
ENSPKIG00000006039	parp1	100	83.694	ENSMZEG00005016907	parp1	100	82.874	Maylandia_zebra
ENSPKIG00000006039	parp1	100	73.409	ENSMGAG00000007760	PARP1	100	73.566	Meleagris_gallopavo
ENSPKIG00000006039	parp1	100	69.450	ENSMAUG00000008306	Parp1	100	69.253	Mesocricetus_auratus
ENSPKIG00000006039	parp1	100	70.096	ENSMICG00000017076	PARP1	100	66.994	Microcebus_murinus
ENSPKIG00000006039	parp1	100	69.744	ENSMOCG00000014315	Parp1	100	69.646	Microtus_ochrogaster
ENSPKIG00000006039	parp1	100	80.157	ENSMMOG00000015966	parp1	100	79.862	Mola_mola
ENSPKIG00000006039	parp1	100	70.432	ENSMODG00000006076	PARP1	100	71.344	Monodelphis_domestica
ENSPKIG00000006039	parp1	100	79.445	ENSMALG00000004057	parp1	100	78.937	Monopterus_albus
ENSPKIG00000006039	parp1	100	70.167	MGP_CAROLIEiJ_G0014978	Parp1	100	77.551	Mus_caroli
ENSPKIG00000006039	parp1	100	69.676	ENSMUSG00000026496	Parp1	99	77.551	Mus_musculus
ENSPKIG00000006039	parp1	100	69.676	MGP_SPRETEiJ_G0015777	Parp1	100	77.551	Mus_spretus
ENSPKIG00000006039	parp1	100	70.236	ENSMPUG00000004585	PARP1	100	70.138	Mustela_putorius_furo
ENSPKIG00000006039	parp1	96	57.969	ENSMLUG00000012285	PARP1	80	76.047	Myotis_lucifugus
ENSPKIG00000006039	parp1	100	69.877	ENSNGAG00000003885	Parp1	100	69.253	Nannospalax_galili
ENSPKIG00000006039	parp1	100	83.251	ENSNBRG00000017434	parp1	100	82.626	Neolamprologus_brichardi
ENSPKIG00000006039	parp1	97	72.356	ENSNLEG00000013905	PARP1	100	72.356	Nomascus_leucogenys
ENSPKIG00000006039	parp1	70	79.403	ENSMEUG00000007720	PARP1	87	79.403	Notamacropus_eugenii
ENSPKIG00000006039	parp1	100	71.863	ENSOPRG00000011722	PARP1	100	71.415	Ochotona_princeps
ENSPKIG00000006039	parp1	100	68.633	ENSODEG00000007424	PARP1	100	68.437	Octodon_degus
ENSPKIG00000006039	parp1	100	83.202	ENSONIG00000013486	parp1	100	82.776	Oreochromis_niloticus
ENSPKIG00000006039	parp1	100	71.677	ENSOANG00000001488	PARP1	100	71.984	Ornithorhynchus_anatinus
ENSPKIG00000006039	parp1	100	71.050	ENSOCUG00000017820	PARP1	100	71.050	Oryctolagus_cuniculus
ENSPKIG00000006039	parp1	100	79.744	ENSORLG00000013691	parp1	100	79.646	Oryzias_latipes
ENSPKIG00000006039	parp1	100	79.774	ENSORLG00020001074	parp1	99	79.671	Oryzias_latipes_hni
ENSPKIG00000006039	parp1	100	79.744	ENSORLG00015007090	parp1	100	79.646	Oryzias_latipes_hsok
ENSPKIG00000006039	parp1	100	71.246	ENSOGAG00000016206	PARP1	100	70.530	Otolemur_garnettii
ENSPKIG00000006039	parp1	100	69.178	ENSOARG00000000811	PARP1	100	68.824	Ovis_aries
ENSPKIG00000006039	parp1	100	70.854	ENSPPAG00000040862	PARP1	100	70.236	Pan_paniscus
ENSPKIG00000006039	parp1	100	70.317	ENSPPRG00000003528	PARP1	100	69.806	Panthera_pardus
ENSPKIG00000006039	parp1	99	57.995	ENSPTIG00000009102	PARP1	98	58.923	Panthera_tigris_altaica
ENSPKIG00000006039	parp1	100	70.854	ENSPTRG00000002049	PARP1	100	70.236	Pan_troglodytes
ENSPKIG00000006039	parp1	100	70.756	ENSPANG00000011198	PARP1	100	70.167	Papio_anubis
ENSPKIG00000006039	parp1	100	71.619	ENSPSIG00000016374	PARP1	100	71.881	Pelodiscus_sinensis
ENSPKIG00000006039	parp1	100	77.353	ENSPMGG00000008936	parp1	100	76.863	Periophthalmus_magnuspinnatus
ENSPKIG00000006039	parp1	100	70.658	ENSPEMG00000020230	Parp1	100	69.843	Peromyscus_maniculatus_bairdii
ENSPKIG00000006039	parp1	100	69.641	ENSPCIG00000006436	PARP1	99	72.263	Phascolarctos_cinereus
ENSPKIG00000006039	parp1	100	80.845	ENSPFOG00000002342	parp1	100	80.531	Poecilia_formosa
ENSPKIG00000006039	parp1	100	80.826	ENSPLAG00000000909	parp1	100	80.826	Poecilia_latipinna
ENSPKIG00000006039	parp1	100	81.219	ENSPMEG00000013979	parp1	100	81.219	Poecilia_mexicana
ENSPKIG00000006039	parp1	100	80.728	ENSPREG00000001114	parp1	100	80.728	Poecilia_reticulata
ENSPKIG00000006039	parp1	100	70.564	ENSPPYG00000000164	PARP1	100	70.051	Pongo_abelii
ENSPKIG00000006039	parp1	60	78.704	ENSPCAG00000005558	-	59	78.704	Procavia_capensis
ENSPKIG00000006039	parp1	100	70.629	ENSPCOG00000016918	PARP1	100	70.727	Propithecus_coquereli
ENSPKIG00000006039	parp1	92	78.049	ENSPVAG00000005543	PARP1	86	78.049	Pteropus_vampyrus
ENSPKIG00000006039	parp1	100	83.350	ENSPNYG00000009702	parp1	100	82.725	Pundamilia_nyererei
ENSPKIG00000006039	parp1	100	83.480	ENSPNAG00000002787	parp1	100	83.578	Pygocentrus_nattereri
ENSPKIG00000006039	parp1	100	69.570	ENSRNOG00000003084	Parp1	99	69.793	Rattus_norvegicus
ENSPKIG00000006039	parp1	100	70.629	ENSRBIG00000044893	PARP1	100	70.138	Rhinopithecus_bieti
ENSPKIG00000006039	parp1	100	52.312	ENSRROG00000040615	-	98	58.763	Rhinopithecus_roxellana
ENSPKIG00000006039	parp1	100	70.629	ENSRROG00000029280	PARP1	100	70.138	Rhinopithecus_roxellana
ENSPKIG00000006039	parp1	100	70.432	ENSSBOG00000010144	PARP1	100	70.629	Saimiri_boliviensis_boliviensis
ENSPKIG00000006039	parp1	100	69.846	ENSSHAG00000001991	PARP1	100	70.462	Sarcophilus_harrisii
ENSPKIG00000006039	parp1	100	88.067	ENSSFOG00015020017	parp1	100	87.870	Scleropages_formosus
ENSPKIG00000006039	parp1	100	82.185	ENSSMAG00000013799	parp1	100	81.988	Scophthalmus_maximus
ENSPKIG00000006039	parp1	100	82.677	ENSSDUG00000016626	parp1	100	82.283	Seriola_dumerili
ENSPKIG00000006039	parp1	100	82.480	ENSSLDG00000006384	parp1	100	82.087	Seriola_lalandi_dorsalis
ENSPKIG00000006039	parp1	55	78.788	ENSSARG00000009436	-	58	78.788	Sorex_araneus
ENSPKIG00000006039	parp1	99	69.330	ENSSPUG00000007790	PARP1	100	68.146	Sphenodon_punctatus
ENSPKIG00000006039	parp1	100	81.418	ENSSPAG00000019074	parp1	100	81.203	Stegastes_partitus
ENSPKIG00000006039	parp1	100	69.412	ENSSSCG00000023660	PARP1	100	68.959	Sus_scrofa
ENSPKIG00000006039	parp1	98	71.920	ENSTGUG00000004260	-	100	71.587	Taeniopygia_guttata
ENSPKIG00000006039	parp1	100	80.493	ENSTRUG00000014490	parp1	100	80.493	Takifugu_rubripes
ENSPKIG00000006039	parp1	100	79.179	ENSTNIG00000016384	parp1	100	79.297	Tetraodon_nigroviridis
ENSPKIG00000006039	parp1	87	76.969	ENSTBEG00000002364	PARP1	92	76.969	Tupaia_belangeri
ENSPKIG00000006039	parp1	100	66.373	ENSTTRG00000000188	PARP1	100	65.914	Tursiops_truncatus
ENSPKIG00000006039	parp1	100	70.510	ENSUAMG00000014388	PARP1	100	69.939	Ursus_americanus
ENSPKIG00000006039	parp1	100	64.032	ENSUMAG00000014555	PARP1	99	64.008	Ursus_maritimus
ENSPKIG00000006039	parp1	82	78.824	ENSVPAG00000011411	PARP1	83	77.444	Vicugna_pacos
ENSPKIG00000006039	parp1	100	69.538	ENSVVUG00000001655	PARP1	100	69.436	Vulpes_vulpes
ENSPKIG00000006039	parp1	99	72.268	ENSXETG00000022610	parp1	99	71.042	Xenopus_tropicalis
ENSPKIG00000006039	parp1	100	80.138	ENSXMAG00000003632	parp1	100	80.236	Xiphophorus_maculatus