EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000006057 (Gene tree)
Gene ID: 111855091
Gene Symbol: sf3b5
Alias: -
Full Name: splicing factor 3b subunit 5
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 261 bases
Position: chrPGUA01000287.1:740905-741165
Accession: 111855091
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021793	SF3b10	PF07189.11	2.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002435	-	261	-	ENSPKIP00000021793	86 (aa)	XP_023689509	UPI000CD66717

Gene Model

Click here to download ENSPKIG00000006057's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006057	sf3b5	99	94.118	ENSG00000169976	SF3B5	99	94.118	Homo_sapiens
ENSPKIG00000006057	sf3b5	100	95.349	ENSAPOG00000001721	sf3b5	100	95.349	Acanthochromis_polyacanthus
ENSPKIG00000006057	sf3b5	100	95.349	ENSACIG00000008106	sf3b5	100	95.349	Amphilophus_citrinellus
ENSPKIG00000006057	sf3b5	100	95.349	ENSAOCG00000023367	sf3b5	100	95.349	Amphiprion_ocellaris
ENSPKIG00000006057	sf3b5	100	95.349	ENSAPEG00000004605	sf3b5	100	95.349	Amphiprion_percula
ENSPKIG00000006057	sf3b5	100	96.512	ENSATEG00000009720	sf3b5	100	96.512	Anabas_testudineus
ENSPKIG00000006057	sf3b5	100	93.023	ENSACAG00000007948	SF3B5	100	93.023	Anolis_carolinensis
ENSPKIG00000006057	sf3b5	99	94.118	ENSANAG00000019999	SF3B5	99	94.118	Aotus_nancymaae
ENSPKIG00000006057	sf3b5	100	95.349	ENSACLG00000022410	sf3b5	100	95.349	Astatotilapia_calliptera
ENSPKIG00000006057	sf3b5	99	94.118	ENSBTAG00000009795	SF3B5	99	94.118	Bos_taurus
ENSPKIG00000006057	sf3b5	99	94.118	ENSCJAG00000046566	SF3B5	99	94.118	Callithrix_jacchus
ENSPKIG00000006057	sf3b5	99	94.118	ENSCAFG00000032495	SF3B5	99	94.118	Canis_familiaris
ENSPKIG00000006057	sf3b5	99	94.118	ENSCAFG00020000873	SF3B5	99	94.118	Canis_lupus_dingo
ENSPKIG00000006057	sf3b5	99	94.118	ENSCHIG00000007987	SF3B5	99	94.118	Capra_hircus
ENSPKIG00000006057	sf3b5	99	94.118	ENSTSYG00000012236	SF3B5	99	94.118	Carlito_syrichta
ENSPKIG00000006057	sf3b5	99	94.118	ENSCPOG00000012435	SF3B5	99	94.118	Cavia_porcellus
ENSPKIG00000006057	sf3b5	99	94.118	ENSCCAG00000006528	SF3B5	99	94.118	Cebus_capucinus
ENSPKIG00000006057	sf3b5	99	94.118	ENSCATG00000010192	SF3B5	99	94.118	Cercocebus_atys
ENSPKIG00000006057	sf3b5	99	94.118	ENSCLAG00000017802	SF3B5	99	94.118	Chinchilla_lanigera
ENSPKIG00000006057	sf3b5	99	94.118	ENSCSAG00000000187	SF3B5	99	94.118	Chlorocebus_sabaeus
ENSPKIG00000006057	sf3b5	100	93.023	ENSCPBG00000017148	SF3B5	100	93.023	Chrysemys_picta_bellii
ENSPKIG00000006057	sf3b5	98	73.810	ENSCING00000021953	-	98	73.810	Ciona_intestinalis
ENSPKIG00000006057	sf3b5	99	94.118	ENSCANG00000002639	SF3B5	99	94.118	Colobus_angolensis_palliatus
ENSPKIG00000006057	sf3b5	99	92.941	ENSCGRG00001007249	Sf3b5	99	92.941	Cricetulus_griseus_chok1gshd
ENSPKIG00000006057	sf3b5	99	92.941	ENSCGRG00000019185	Sf3b5	99	92.941	Cricetulus_griseus_crigri
ENSPKIG00000006057	sf3b5	100	95.349	ENSCSEG00000003216	sf3b5	100	95.349	Cynoglossus_semilaevis
ENSPKIG00000006057	sf3b5	100	96.512	ENSCVAG00000005040	sf3b5	100	96.512	Cyprinodon_variegatus
ENSPKIG00000006057	sf3b5	100	94.186	ENSDARG00000016855	sf3b5	100	94.186	Danio_rerio
ENSPKIG00000006057	sf3b5	99	94.118	ENSDNOG00000048829	SF3B5	81	94.118	Dasypus_novemcinctus
ENSPKIG00000006057	sf3b5	99	94.118	ENSDORG00000005838	Sf3b5	99	94.118	Dipodomys_ordii
ENSPKIG00000006057	sf3b5	99	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
ENSPKIG00000006057	sf3b5	99	94.118	ENSETEG00000004047	SF3B5	99	94.118	Echinops_telfairi
ENSPKIG00000006057	sf3b5	99	84.706	ENSEBUG00000002311	sf3b5	100	84.706	Eptatretus_burgeri
ENSPKIG00000006057	sf3b5	99	94.118	ENSEASG00005009522	SF3B5	99	94.118	Equus_asinus_asinus
ENSPKIG00000006057	sf3b5	99	94.118	ENSECAG00000005457	SF3B5	99	94.118	Equus_caballus
ENSPKIG00000006057	sf3b5	100	95.349	ENSELUG00000014290	SF3B5	100	95.349	Esox_lucius
ENSPKIG00000006057	sf3b5	99	94.118	ENSFCAG00000000936	SF3B5	99	94.118	Felis_catus
ENSPKIG00000006057	sf3b5	100	91.860	ENSFALG00000015012	SF3B5	100	91.860	Ficedula_albicollis
ENSPKIG00000006057	sf3b5	99	94.118	ENSFDAG00000003664	SF3B5	99	94.118	Fukomys_damarensis
ENSPKIG00000006057	sf3b5	100	96.512	ENSFHEG00000020301	sf3b5	100	96.512	Fundulus_heteroclitus
ENSPKIG00000006057	sf3b5	100	96.512	ENSGMOG00000019972	sf3b5	100	96.512	Gadus_morhua
ENSPKIG00000006057	sf3b5	100	94.186	ENSGALG00000030824	SF3B5	100	94.186	Gallus_gallus
ENSPKIG00000006057	sf3b5	100	96.512	ENSGAFG00000000271	sf3b5	100	96.512	Gambusia_affinis
ENSPKIG00000006057	sf3b5	100	96.512	ENSGACG00000010363	sf3b5	100	96.512	Gasterosteus_aculeatus
ENSPKIG00000006057	sf3b5	100	93.023	ENSGAGG00000011434	SF3B5	100	93.023	Gopherus_agassizii
ENSPKIG00000006057	sf3b5	100	87.209	ENSGAGG00000000646	-	100	87.209	Gopherus_agassizii
ENSPKIG00000006057	sf3b5	99	94.118	ENSGGOG00000001537	SF3B5	99	94.118	Gorilla_gorilla
ENSPKIG00000006057	sf3b5	100	95.349	ENSHBUG00000008925	sf3b5	100	95.349	Haplochromis_burtoni
ENSPKIG00000006057	sf3b5	99	94.118	ENSHGLG00000021406	SF3B5	99	94.118	Heterocephalus_glaber_female
ENSPKIG00000006057	sf3b5	99	94.118	ENSHGLG00100020370	SF3B5	99	94.118	Heterocephalus_glaber_male
ENSPKIG00000006057	sf3b5	100	95.349	ENSHCOG00000009115	-	100	95.349	Hippocampus_comes
ENSPKIG00000006057	sf3b5	100	95.349	ENSHCOG00000016802	sf3b5	100	95.349	Hippocampus_comes
ENSPKIG00000006057	sf3b5	100	95.349	ENSHCOG00000016806	sf3b5	100	95.349	Hippocampus_comes
ENSPKIG00000006057	sf3b5	100	96.512	ENSIPUG00000015166	sf3b5	100	96.512	Ictalurus_punctatus
ENSPKIG00000006057	sf3b5	99	94.118	ENSSTOG00000003347	SF3B5	99	94.118	Ictidomys_tridecemlineatus
ENSPKIG00000006057	sf3b5	99	94.118	ENSJJAG00000001857	Sf3b5	99	94.118	Jaculus_jaculus
ENSPKIG00000006057	sf3b5	100	96.512	ENSKMAG00000002249	sf3b5	100	96.512	Kryptolebias_marmoratus
ENSPKIG00000006057	sf3b5	100	96.512	ENSLBEG00000019847	sf3b5	100	96.512	Labrus_bergylta
ENSPKIG00000006057	sf3b5	100	90.698	ENSLACG00000000946	SF3B5	100	90.698	Latimeria_chalumnae
ENSPKIG00000006057	sf3b5	100	97.674	ENSLOCG00000017352	sf3b5	100	97.674	Lepisosteus_oculatus
ENSPKIG00000006057	sf3b5	99	94.118	ENSLAFG00000032489	SF3B5	99	94.118	Loxodonta_africana
ENSPKIG00000006057	sf3b5	99	94.118	ENSMFAG00000029753	SF3B5	99	94.118	Macaca_fascicularis
ENSPKIG00000006057	sf3b5	99	94.118	ENSMMUG00000047691	SF3B5	99	94.118	Macaca_mulatta
ENSPKIG00000006057	sf3b5	99	94.118	ENSMNEG00000028236	SF3B5	99	94.118	Macaca_nemestrina
ENSPKIG00000006057	sf3b5	99	94.118	ENSMLEG00000007622	SF3B5	99	94.118	Mandrillus_leucophaeus
ENSPKIG00000006057	sf3b5	100	97.674	ENSMAMG00000021639	sf3b5	100	97.674	Mastacembelus_armatus
ENSPKIG00000006057	sf3b5	100	86.047	ENSMZEG00005027407	sf3b5	100	86.047	Maylandia_zebra
ENSPKIG00000006057	sf3b5	100	95.349	ENSMZEG00005027408	sf3b5	100	95.349	Maylandia_zebra
ENSPKIG00000006057	sf3b5	100	95.349	ENSMZEG00005028115	SF3B5	100	95.349	Maylandia_zebra
ENSPKIG00000006057	sf3b5	100	94.186	ENSMGAG00000015849	SF3B5	100	94.186	Meleagris_gallopavo
ENSPKIG00000006057	sf3b5	99	92.941	ENSMAUG00000008283	Sf3b5	99	92.941	Mesocricetus_auratus
ENSPKIG00000006057	sf3b5	99	94.118	ENSMICG00000014922	SF3B5	99	94.118	Microcebus_murinus
ENSPKIG00000006057	sf3b5	99	92.941	ENSMOCG00000001713	Sf3b5	99	92.941	Microtus_ochrogaster
ENSPKIG00000006057	sf3b5	100	97.674	ENSMMOG00000007956	sf3b5	100	97.674	Mola_mola
ENSPKIG00000006057	sf3b5	99	94.118	ENSMODG00000023291	SF3B5	83	94.118	Monodelphis_domestica
ENSPKIG00000006057	sf3b5	91	92.593	ENSMALG00000020357	sf3b5	99	92.593	Monopterus_albus
ENSPKIG00000006057	sf3b5	99	92.941	MGP_CAROLIEiJ_G0015120	Sf3b5	99	92.941	Mus_caroli
ENSPKIG00000006057	sf3b5	99	92.941	ENSMUSG00000078348	Sf3b5	99	92.941	Mus_musculus
ENSPKIG00000006057	sf3b5	99	92.941	MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	Mus_pahari
ENSPKIG00000006057	sf3b5	99	92.941	MGP_SPRETEiJ_G0015928	Sf3b5	99	92.941	Mus_spretus
ENSPKIG00000006057	sf3b5	99	94.118	ENSMPUG00000018379	SF3B5	99	94.118	Mustela_putorius_furo
ENSPKIG00000006057	sf3b5	99	94.118	ENSMLUG00000028504	-	99	94.118	Myotis_lucifugus
ENSPKIG00000006057	sf3b5	93	92.500	ENSMLUG00000025546	-	93	92.500	Myotis_lucifugus
ENSPKIG00000006057	sf3b5	99	89.412	ENSMLUG00000010802	-	99	89.412	Myotis_lucifugus
ENSPKIG00000006057	sf3b5	99	94.118	ENSNGAG00000010732	Sf3b5	99	94.118	Nannospalax_galili
ENSPKIG00000006057	sf3b5	100	95.349	ENSNBRG00000014383	sf3b5	100	95.349	Neolamprologus_brichardi
ENSPKIG00000006057	sf3b5	99	94.118	ENSNLEG00000019307	SF3B5	99	94.118	Nomascus_leucogenys
ENSPKIG00000006057	sf3b5	99	94.118	ENSMEUG00000005445	-	99	94.118	Notamacropus_eugenii
ENSPKIG00000006057	sf3b5	99	94.118	ENSMEUG00000005440	-	99	94.118	Notamacropus_eugenii
ENSPKIG00000006057	sf3b5	99	95.294	ENSOPRG00000015107	SF3B5	99	95.294	Ochotona_princeps
ENSPKIG00000006057	sf3b5	99	94.118	ENSODEG00000019507	SF3B5	99	94.118	Octodon_degus
ENSPKIG00000006057	sf3b5	100	95.349	ENSONIG00000020725	sf3b5	100	95.349	Oreochromis_niloticus
ENSPKIG00000006057	sf3b5	67	93.103	ENSOANG00000015301	SF3B5	95	93.103	Ornithorhynchus_anatinus
ENSPKIG00000006057	sf3b5	99	94.118	ENSOCUG00000008752	SF3B5	99	94.118	Oryctolagus_cuniculus
ENSPKIG00000006057	sf3b5	100	98.837	ENSORLG00000004925	sf3b5	100	98.837	Oryzias_latipes
ENSPKIG00000006057	sf3b5	100	98.837	ENSORLG00020011625	sf3b5	100	98.837	Oryzias_latipes_hni
ENSPKIG00000006057	sf3b5	100	98.837	ENSORLG00015017061	sf3b5	100	98.837	Oryzias_latipes_hsok
ENSPKIG00000006057	sf3b5	100	98.837	ENSOMEG00000010620	sf3b5	100	98.837	Oryzias_melastigma
ENSPKIG00000006057	sf3b5	99	94.118	ENSOGAG00000012152	SF3B5	99	94.118	Otolemur_garnettii
ENSPKIG00000006057	sf3b5	92	94.937	ENSOARG00000019486	-	95	94.937	Ovis_aries
ENSPKIG00000006057	sf3b5	99	90.588	ENSOARG00000002617	SF3B5	99	90.588	Ovis_aries
ENSPKIG00000006057	sf3b5	99	94.118	ENSPPAG00000012940	SF3B5	99	94.118	Pan_paniscus
ENSPKIG00000006057	sf3b5	99	94.118	ENSPPRG00000021262	SF3B5	99	94.118	Panthera_pardus
ENSPKIG00000006057	sf3b5	99	94.118	ENSPTIG00000001952	SF3B5	99	94.118	Panthera_tigris_altaica
ENSPKIG00000006057	sf3b5	99	94.118	ENSPTRG00000018676	SF3B5	99	94.118	Pan_troglodytes
ENSPKIG00000006057	sf3b5	99	94.118	ENSPANG00000034242	SF3B5	99	94.118	Papio_anubis
ENSPKIG00000006057	sf3b5	100	93.023	ENSPSIG00000001262	SF3B5	100	93.023	Pelodiscus_sinensis
ENSPKIG00000006057	sf3b5	100	95.349	ENSPMGG00000014804	sf3b5	100	95.349	Periophthalmus_magnuspinnatus
ENSPKIG00000006057	sf3b5	99	92.941	ENSPEMG00000012931	Sf3b5	99	92.941	Peromyscus_maniculatus_bairdii
ENSPKIG00000006057	sf3b5	100	89.535	ENSPMAG00000010296	sf3b5	100	89.535	Petromyzon_marinus
ENSPKIG00000006057	sf3b5	93	96.250	ENSPCIG00000011344	-	78	96.250	Phascolarctos_cinereus
ENSPKIG00000006057	sf3b5	99	72.941	ENSPCIG00000025007	-	99	72.941	Phascolarctos_cinereus
ENSPKIG00000006057	sf3b5	100	96.512	ENSPFOG00000019994	sf3b5	100	96.512	Poecilia_formosa
ENSPKIG00000006057	sf3b5	100	96.512	ENSPLAG00000008412	sf3b5	100	96.512	Poecilia_latipinna
ENSPKIG00000006057	sf3b5	100	96.512	ENSPMEG00000020050	sf3b5	100	96.512	Poecilia_mexicana
ENSPKIG00000006057	sf3b5	100	96.512	ENSPREG00000009242	sf3b5	100	96.512	Poecilia_reticulata
ENSPKIG00000006057	sf3b5	99	94.118	ENSPPYG00000017068	SF3B5	99	94.118	Pongo_abelii
ENSPKIG00000006057	sf3b5	99	94.118	ENSPCAG00000009332	SF3B5	99	94.118	Procavia_capensis
ENSPKIG00000006057	sf3b5	99	94.118	ENSPCOG00000013754	SF3B5	99	94.118	Propithecus_coquereli
ENSPKIG00000006057	sf3b5	56	97.917	ENSPVAG00000002820	SF3B5	100	97.917	Pteropus_vampyrus
ENSPKIG00000006057	sf3b5	100	95.349	ENSPNYG00000002075	sf3b5	100	95.349	Pundamilia_nyererei
ENSPKIG00000006057	sf3b5	100	97.674	ENSPNAG00000004942	sf3b5	100	97.674	Pygocentrus_nattereri
ENSPKIG00000006057	sf3b5	99	92.941	ENSRNOG00000014908	Sf3b5	99	92.941	Rattus_norvegicus
ENSPKIG00000006057	sf3b5	99	94.118	ENSRBIG00000006301	SF3B5	99	94.118	Rhinopithecus_bieti
ENSPKIG00000006057	sf3b5	99	94.118	ENSRROG00000037067	SF3B5	99	94.118	Rhinopithecus_roxellana
ENSPKIG00000006057	sf3b5	99	94.118	ENSSBOG00000006122	SF3B5	99	94.118	Saimiri_boliviensis_boliviensis
ENSPKIG00000006057	sf3b5	99	92.941	ENSSHAG00000015670	SF3B5	99	92.941	Sarcophilus_harrisii
ENSPKIG00000006057	sf3b5	100	96.512	ENSSFOG00015015767	sf3b5	100	96.512	Scleropages_formosus
ENSPKIG00000006057	sf3b5	100	95.349	ENSSMAG00000018852	sf3b5	100	95.349	Scophthalmus_maximus
ENSPKIG00000006057	sf3b5	100	96.512	ENSSDUG00000018161	sf3b5	100	96.512	Seriola_dumerili
ENSPKIG00000006057	sf3b5	100	96.512	ENSSLDG00000014547	sf3b5	100	96.512	Seriola_lalandi_dorsalis
ENSPKIG00000006057	sf3b5	99	94.118	ENSSARG00000007820	SF3B5	99	94.118	Sorex_araneus
ENSPKIG00000006057	sf3b5	100	95.349	ENSSPAG00000017371	-	100	95.349	Stegastes_partitus
ENSPKIG00000006057	sf3b5	100	95.349	ENSSPAG00000009244	sf3b5	100	95.349	Stegastes_partitus
ENSPKIG00000006057	sf3b5	99	94.118	ENSSSCG00000035578	SF3B5	99	94.118	Sus_scrofa
ENSPKIG00000006057	sf3b5	100	94.186	ENSTGUG00000010810	SF3B5	100	94.186	Taeniopygia_guttata
ENSPKIG00000006057	sf3b5	100	94.186	ENSTRUG00000005577	sf3b5	100	94.186	Takifugu_rubripes
ENSPKIG00000006057	sf3b5	100	94.186	ENSTNIG00000001265	sf3b5	100	94.186	Tetraodon_nigroviridis
ENSPKIG00000006057	sf3b5	99	95.294	ENSTBEG00000003072	SF3B5	99	95.294	Tupaia_belangeri
ENSPKIG00000006057	sf3b5	99	94.118	ENSTTRG00000008817	SF3B5	99	94.118	Tursiops_truncatus
ENSPKIG00000006057	sf3b5	99	94.118	ENSUAMG00000027296	SF3B5	99	94.118	Ursus_americanus
ENSPKIG00000006057	sf3b5	99	94.118	ENSUMAG00000005448	SF3B5	99	94.118	Ursus_maritimus
ENSPKIG00000006057	sf3b5	99	94.118	ENSVPAG00000003826	SF3B5	99	94.118	Vicugna_pacos
ENSPKIG00000006057	sf3b5	99	94.118	ENSVVUG00000004703	SF3B5	99	94.118	Vulpes_vulpes
ENSPKIG00000006057	sf3b5	100	94.186	ENSXETG00000021409	sf3b5	100	94.186	Xenopus_tropicalis
ENSPKIG00000006057	sf3b5	100	96.512	ENSXMAG00000019971	sf3b5	100	96.512	Xiphophorus_maculatus