EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006067 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 3154 bases
Position: chrPGUA01000055.1:2441243-2444396
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021812	zf-C2H2	PF00096.26	2.6e-20	1	3
ENSPKIP00000021812	zf-C2H2	PF00096.26	2.6e-20	2	3
ENSPKIP00000021812	zf-C2H2	PF00096.26	2.6e-20	3	3
ENSPKIP00000021812	zf-met	PF12874.7	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002455	-	2782	-	ENSPKIP00000021812	240 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006067's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006067	-	56	40.217	ENSPKIG00000015951	-	68	40.217
ENSPKIG00000006067	-	51	43.750	ENSPKIG00000017781	-	62	44.048
ENSPKIG00000006067	-	74	39.744	ENSPKIG00000009111	-	81	39.744
ENSPKIG00000006067	-	58	39.773	ENSPKIG00000012069	-	97	39.773
ENSPKIG00000006067	-	75	40.789	ENSPKIG00000006616	-	60	39.048
ENSPKIG00000006067	-	50	36.283	ENSPKIG00000015139	znf319b	58	36.283
ENSPKIG00000006067	-	98	50.000	ENSPKIG00000018168	znf236	52	50.000
ENSPKIG00000006067	-	77	65.842	ENSPKIG00000006393	snai1a	77	66.337
ENSPKIG00000006067	-	53	36.842	ENSPKIG00000012290	-	97	38.462
ENSPKIG00000006067	-	51	42.308	ENSPKIG00000006563	-	97	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006067	-	78	61.502	ENSAPOG00000016426	-	63	62.573	Acanthochromis_polyacanthus
ENSPKIG00000006067	-	79	65.238	ENSAPOG00000002867	snai1a	82	63.208	Acanthochromis_polyacanthus
ENSPKIG00000006067	-	78	65.865	ENSACIG00000011318	snai1a	83	63.333	Amphilophus_citrinellus
ENSPKIG00000006067	-	78	58.371	ENSACIG00000009443	-	80	58.371	Amphilophus_citrinellus
ENSPKIG00000006067	-	78	59.447	ENSAOCG00000019753	-	80	59.447	Amphiprion_ocellaris
ENSPKIG00000006067	-	79	66.190	ENSAOCG00000018003	snai1a	81	63.679	Amphiprion_ocellaris
ENSPKIG00000006067	-	79	66.190	ENSAPEG00000024286	snai1a	81	63.679	Amphiprion_percula
ENSPKIG00000006067	-	62	66.667	ENSAPEG00000007647	-	65	64.848	Amphiprion_percula
ENSPKIG00000006067	-	77	66.502	ENSATEG00000015639	snai1a	79	64.706	Anabas_testudineus
ENSPKIG00000006067	-	78	59.908	ENSATEG00000004944	-	63	63.743	Anabas_testudineus
ENSPKIG00000006067	-	76	57.576	ENSAPLG00000014633	-	85	57.216	Anas_platyrhynchos
ENSPKIG00000006067	-	79	65.550	ENSACLG00000020860	snai1a	91	58.403	Astatotilapia_calliptera
ENSPKIG00000006067	-	78	58.904	ENSACLG00000026461	-	80	58.904	Astatotilapia_calliptera
ENSPKIG00000006067	-	77	63.333	ENSAMXG00000039849	snai1b	78	62.136	Astyanax_mexicanus
ENSPKIG00000006067	-	92	53.942	ENSCSEG00000021022	-	97	54.357	Cynoglossus_semilaevis
ENSPKIG00000006067	-	77	64.679	ENSCSEG00000009739	snai1a	80	60.092	Cynoglossus_semilaevis
ENSPKIG00000006067	-	75	62.981	ENSCVAG00000009930	-	62	66.071	Cyprinodon_variegatus
ENSPKIG00000006067	-	77	67.961	ENSCVAG00000008717	snai1a	79	65.534	Cyprinodon_variegatus
ENSPKIG00000006067	-	80	66.190	ENSDARG00000056995	snai1a	82	63.285	Danio_rerio
ENSPKIG00000006067	-	78	61.058	ENSDARG00000046019	snai1b	80	61.650	Danio_rerio
ENSPKIG00000006067	-	70	56.915	ENSELUG00000004844	snai1a	71	53.723	Esox_lucius
ENSPKIG00000006067	-	79	64.423	ENSELUG00000002056	SNAI1	99	57.031	Esox_lucius
ENSPKIG00000006067	-	78	68.116	ENSFHEG00000018724	snai1a	80	65.385	Fundulus_heteroclitus
ENSPKIG00000006067	-	70	62.564	ENSFHEG00000022095	-	61	62.130	Fundulus_heteroclitus
ENSPKIG00000006067	-	74	70.157	ENSGMOG00000017815	snai1a	78	65.657	Gadus_morhua
ENSPKIG00000006067	-	61	63.125	ENSGMOG00000000127	-	78	56.771	Gadus_morhua
ENSPKIG00000006067	-	77	66.505	ENSGAFG00000020143	snai1a	80	65.049	Gambusia_affinis
ENSPKIG00000006067	-	75	63.725	ENSGAFG00000021126	-	63	64.912	Gambusia_affinis
ENSPKIG00000006067	-	75	65.445	ENSGACG00000010147	snai1a	77	65.816	Gasterosteus_aculeatus
ENSPKIG00000006067	-	76	57.692	ENSGACG00000001618	-	74	55.208	Gasterosteus_aculeatus
ENSPKIG00000006067	-	76	57.843	ENSGAGG00000022705	SNAI1	62	62.987	Gopherus_agassizii
ENSPKIG00000006067	-	78	58.904	ENSHBUG00000005726	-	80	58.904	Haplochromis_burtoni
ENSPKIG00000006067	-	79	65.550	ENSHBUG00000013491	snai1a	81	63.679	Haplochromis_burtoni
ENSPKIG00000006067	-	77	67.980	ENSHCOG00000003407	snai1a	80	67.647	Hippocampus_comes
ENSPKIG00000006067	-	78	60.930	ENSIPUG00000015844	snai1b	79	60.190	Ictalurus_punctatus
ENSPKIG00000006067	-	79	66.346	ENSKMAG00000021206	snai1a	81	64.115	Kryptolebias_marmoratus
ENSPKIG00000006067	-	77	61.463	ENSLBEG00000017605	snai1a	85	61.333	Labrus_bergylta
ENSPKIG00000006067	-	62	62.791	ENSLBEG00000006963	-	63	62.573	Labrus_bergylta
ENSPKIG00000006067	-	76	56.863	ENSLACG00000017707	SNAI1	60	62.987	Latimeria_chalumnae
ENSPKIG00000006067	-	79	65.196	ENSLOCG00000004443	snai1a	79	65.174	Lepisosteus_oculatus
ENSPKIG00000006067	-	78	60.829	ENSMAMG00000010384	-	65	78.788	Mastacembelus_armatus
ENSPKIG00000006067	-	77	67.157	ENSMAMG00000020994	snai1a	79	64.216	Mastacembelus_armatus
ENSPKIG00000006067	-	78	58.904	ENSMZEG00005026596	-	80	58.904	Maylandia_zebra
ENSPKIG00000006067	-	79	65.550	ENSMZEG00005010038	snai1a	91	58.403	Maylandia_zebra
ENSPKIG00000006067	-	78	66.990	ENSMMOG00000019965	snai1a	83	64.563	Mola_mola
ENSPKIG00000006067	-	61	65.244	ENSMMOG00000020343	-	64	65.244	Mola_mola
ENSPKIG00000006067	-	90	52.361	ENSMODG00000016309	SNAI1	60	64.744	Monodelphis_domestica
ENSPKIG00000006067	-	77	67.647	ENSMALG00000005785	snai1a	79	64.216	Monopterus_albus
ENSPKIG00000006067	-	78	65.385	ENSNBRG00000003394	-	87	62.857	Neolamprologus_brichardi
ENSPKIG00000006067	-	78	58.904	ENSNBRG00000014403	-	81	58.904	Neolamprologus_brichardi
ENSPKIG00000006067	-	79	65.550	ENSNBRG00000023091	snai1a	93	58.650	Neolamprologus_brichardi
ENSPKIG00000006067	-	76	58.605	ENSONIG00000017451	-	79	58.605	Oreochromis_niloticus
ENSPKIG00000006067	-	79	65.238	ENSONIG00000020305	snai1a	81	63.208	Oreochromis_niloticus
ENSPKIG00000006067	-	77	57.143	ENSOCUG00000005422	SNAI1	51	76.923	Oryctolagus_cuniculus
ENSPKIG00000006067	-	79	62.981	ENSORLG00000023047	snai1a	81	61.058	Oryzias_latipes
ENSPKIG00000006067	-	79	63.462	ENSORLG00020019789	snai1a	81	61.538	Oryzias_latipes_hni
ENSPKIG00000006067	-	79	62.981	ENSORLG00015015416	snai1a	81	61.058	Oryzias_latipes_hsok
ENSPKIG00000006067	-	79	63.462	ENSOMEG00000023773	snai1a	81	62.019	Oryzias_melastigma
ENSPKIG00000006067	-	70	63.830	ENSOMEG00000012928	-	62	62.805	Oryzias_melastigma
ENSPKIG00000006067	-	76	57.843	ENSPSIG00000003607	SNAI1	60	63.636	Pelodiscus_sinensis
ENSPKIG00000006067	-	77	65.347	ENSPMGG00000023198	snai1a	79	61.881	Periophthalmus_magnuspinnatus
ENSPKIG00000006067	-	69	62.632	ENSPMGG00000006947	-	79	61.307	Periophthalmus_magnuspinnatus
ENSPKIG00000006067	-	82	66.359	ENSPFOG00000015709	snai1a	84	64.055	Poecilia_formosa
ENSPKIG00000006067	-	62	68.790	ENSPFOG00000008667	-	62	68.790	Poecilia_formosa
ENSPKIG00000006067	-	62	64.327	ENSPLAG00000010605	-	65	64.327	Poecilia_latipinna
ENSPKIG00000006067	-	82	62.896	ENSPLAG00000011169	snai1a	90	61.712	Poecilia_latipinna
ENSPKIG00000006067	-	62	64.327	ENSPMEG00000007205	-	65	64.327	Poecilia_mexicana
ENSPKIG00000006067	-	77	66.505	ENSPMEG00000017260	snai1a	79	65.049	Poecilia_mexicana
ENSPKIG00000006067	-	82	63.964	ENSPREG00000022303	snai1a	85	61.712	Poecilia_reticulata
ENSPKIG00000006067	-	72	63.590	ENSPREG00000018470	-	63	64.327	Poecilia_reticulata
ENSPKIG00000006067	-	78	58.904	ENSPNYG00000001207	-	81	58.904	Pundamilia_nyererei
ENSPKIG00000006067	-	79	65.550	ENSPNYG00000018944	snai1a	91	58.403	Pundamilia_nyererei
ENSPKIG00000006067	-	64	68.421	ENSPNAG00000024123	snai1b	63	67.470	Pygocentrus_nattereri
ENSPKIG00000006067	-	90	51.695	ENSSHAG00000011015	SNAI1	89	52.542	Sarcophilus_harrisii
ENSPKIG00000006067	-	79	65.049	ENSSFOG00015021578	snai1a	79	62.255	Scleropages_formosus
ENSPKIG00000006067	-	85	59.024	ENSSFOG00015021176	-	90	51.464	Scleropages_formosus
ENSPKIG00000006067	-	77	67.805	ENSSMAG00000013652	snai1a	79	64.563	Scophthalmus_maximus
ENSPKIG00000006067	-	77	66.667	ENSSDUG00000019933	snai1a	79	62.745	Seriola_dumerili
ENSPKIG00000006067	-	77	66.667	ENSSLDG00000011412	snai1a	79	62.745	Seriola_lalandi_dorsalis
ENSPKIG00000006067	-	76	56.281	ENSSPUG00000018057	SNAI1	59	62.987	Sphenodon_punctatus
ENSPKIG00000006067	-	79	66.667	ENSSPAG00000001874	snai1a	81	65.238	Stegastes_partitus
ENSPKIG00000006067	-	77	61.765	ENSTRUG00000022990	sna1	79	64.216	Takifugu_rubripes
ENSPKIG00000006067	-	77	62.745	ENSTNIG00000007311	snai1a	79	66.176	Tetraodon_nigroviridis
ENSPKIG00000006067	-	65	61.818	ENSXETG00000027366	snai1	84	52.727	Xenopus_tropicalis
ENSPKIG00000006067	-	77	65.534	ENSXCOG00000017528	snai1a	79	64.563	Xiphophorus_couchianus
ENSPKIG00000006067	-	75	67.368	ENSXCOG00000008003	-	61	71.523	Xiphophorus_couchianus
ENSPKIG00000006067	-	75	62.381	ENSXMAG00000015281	-	66	64.912	Xiphophorus_maculatus
ENSPKIG00000006067	-	77	66.505	ENSXMAG00000027735	snai1a	79	65.049	Xiphophorus_maculatus