EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006092 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 558 bases
Position: chrPGUA01000262.1:850328-850885
Accession: ZDB-GENE-070629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000021863	LSM	PF01423.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002507	-	300	-	ENSPKIP00000021863	99 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006092's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006092	lsm8	73	35.714	ENSPKIG00000001839	lsm1	62	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006092	lsm8	86	97.647	ENSG00000128534	LSM8	100	97.333	Homo_sapiens
ENSPKIG00000006092	lsm8	86	95.294	ENSAPOG00000008649	lsm8	89	95.294	Acanthochromis_polyacanthus
ENSPKIG00000006092	lsm8	86	97.647	ENSAMEG00000001162	LSM8	89	97.647	Ailuropoda_melanoleuca
ENSPKIG00000006092	lsm8	76	97.333	ENSACIG00000014694	lsm8	100	97.333	Amphilophus_citrinellus
ENSPKIG00000006092	lsm8	86	95.294	ENSAOCG00000013926	lsm8	89	95.294	Amphiprion_ocellaris
ENSPKIG00000006092	lsm8	86	95.294	ENSAPEG00000023502	lsm8	89	95.294	Amphiprion_percula
ENSPKIG00000006092	lsm8	76	97.333	ENSATEG00000023432	lsm8	100	97.333	Anabas_testudineus
ENSPKIG00000006092	lsm8	88	98.851	ENSAPLG00000005115	LSM8	88	98.851	Anas_platyrhynchos
ENSPKIG00000006092	lsm8	86	97.647	ENSANAG00000027771	LSM8	100	94.595	Aotus_nancymaae
ENSPKIG00000006092	lsm8	86	95.294	ENSACLG00000011253	lsm8	89	95.294	Astatotilapia_calliptera
ENSPKIG00000006092	lsm8	86	97.647	ENSAMXG00000042902	lsm8	89	97.647	Astyanax_mexicanus
ENSPKIG00000006092	lsm8	86	97.647	ENSBTAG00000012649	LSM8	89	97.647	Bos_taurus
ENSPKIG00000006092	lsm8	83	59.756	WBGene00003082	lsm-8	84	59.756	Caenorhabditis_elegans
ENSPKIG00000006092	lsm8	86	97.647	ENSCJAG00000046406	LSM8	100	94.595	Callithrix_jacchus
ENSPKIG00000006092	lsm8	84	98.795	ENSCAFG00000016459	LSM8	84	98.795	Canis_familiaris
ENSPKIG00000006092	lsm8	75	97.297	ENSCAFG00020012800	-	58	97.297	Canis_lupus_dingo
ENSPKIG00000006092	lsm8	86	97.647	ENSCAFG00020007643	-	89	97.647	Canis_lupus_dingo
ENSPKIG00000006092	lsm8	93	92.391	ENSCHIG00000014201	LSM8	98	92.391	Capra_hircus
ENSPKIG00000006092	lsm8	86	97.647	ENSTSYG00000032434	LSM8	89	97.647	Carlito_syrichta
ENSPKIG00000006092	lsm8	75	95.946	ENSCAPG00000008253	LSM8	100	95.946	Cavia_aperea
ENSPKIG00000006092	lsm8	86	97.647	ENSCPOG00000035673	LSM8	89	97.647	Cavia_porcellus
ENSPKIG00000006092	lsm8	86	97.647	ENSCCAG00000021329	LSM8	100	94.595	Cebus_capucinus
ENSPKIG00000006092	lsm8	86	97.647	ENSCATG00000045302	LSM8	100	94.595	Cercocebus_atys
ENSPKIG00000006092	lsm8	86	97.647	ENSCLAG00000003726	LSM8	89	97.647	Chinchilla_lanigera
ENSPKIG00000006092	lsm8	86	97.647	ENSCSAG00000010802	-	89	97.647	Chlorocebus_sabaeus
ENSPKIG00000006092	lsm8	89	94.318	ENSCSAG00000019007	-	91	94.318	Chlorocebus_sabaeus
ENSPKIG00000006092	lsm8	93	93.478	ENSCPBG00000008154	LSM8	94	93.478	Chrysemys_picta_bellii
ENSPKIG00000006092	lsm8	85	76.190	ENSCING00000024877	-	88	76.190	Ciona_intestinalis
ENSPKIG00000006092	lsm8	86	97.647	ENSCANG00000040728	LSM8	100	94.595	Colobus_angolensis_palliatus
ENSPKIG00000006092	lsm8	86	97.647	ENSCGRG00001000450	Lsm8	89	97.647	Cricetulus_griseus_chok1gshd
ENSPKIG00000006092	lsm8	86	97.647	ENSCGRG00000005587	Lsm8	100	97.647	Cricetulus_griseus_crigri
ENSPKIG00000006092	lsm8	73	95.833	ENSCSEG00000004164	lsm8	79	95.833	Cynoglossus_semilaevis
ENSPKIG00000006092	lsm8	86	96.471	ENSCVAG00000020547	lsm8	89	96.471	Cyprinodon_variegatus
ENSPKIG00000006092	lsm8	86	95.294	ENSDARG00000091656	lsm8	89	95.294	Danio_rerio
ENSPKIG00000006092	lsm8	86	97.647	ENSDNOG00000034613	LSM8	89	97.647	Dasypus_novemcinctus
ENSPKIG00000006092	lsm8	86	97.647	ENSDORG00000027868	Lsm8	89	97.647	Dipodomys_ordii
ENSPKIG00000006092	lsm8	86	71.765	FBgn0035271	CG2021	89	71.765	Drosophila_melanogaster
ENSPKIG00000006092	lsm8	86	98.824	ENSETEG00000011594	LSM8	89	98.824	Echinops_telfairi
ENSPKIG00000006092	lsm8	75	91.892	ENSEBUG00000012017	lsm8	100	91.892	Eptatretus_burgeri
ENSPKIG00000006092	lsm8	86	97.647	ENSEASG00005008932	LSM8	55	97.647	Equus_asinus_asinus
ENSPKIG00000006092	lsm8	93	92.391	ENSECAG00000024025	LSM8	84	92.391	Equus_caballus
ENSPKIG00000006092	lsm8	86	94.118	ENSELUG00000010138	lsm8	89	94.118	Esox_lucius
ENSPKIG00000006092	lsm8	77	73.684	ENSFCAG00000044794	-	76	73.684	Felis_catus
ENSPKIG00000006092	lsm8	86	97.647	ENSFCAG00000036620	-	89	97.647	Felis_catus
ENSPKIG00000006092	lsm8	86	98.824	ENSFALG00000010023	LSM8	89	98.824	Ficedula_albicollis
ENSPKIG00000006092	lsm8	86	97.647	ENSFDAG00000019530	LSM8	89	97.647	Fukomys_damarensis
ENSPKIG00000006092	lsm8	86	95.294	ENSFHEG00000013729	lsm8	89	95.294	Fundulus_heteroclitus
ENSPKIG00000006092	lsm8	86	98.824	ENSGALG00000009110	LSM8	89	98.824	Gallus_gallus
ENSPKIG00000006092	lsm8	86	96.471	ENSGAFG00000001135	lsm8	89	96.471	Gambusia_affinis
ENSPKIG00000006092	lsm8	93	93.478	ENSGAGG00000017366	LSM8	94	93.478	Gopherus_agassizii
ENSPKIG00000006092	lsm8	86	97.647	ENSGGOG00000041883	LSM8	89	97.647	Gorilla_gorilla
ENSPKIG00000006092	lsm8	86	95.294	ENSHBUG00000003646	lsm8	89	95.294	Haplochromis_burtoni
ENSPKIG00000006092	lsm8	58	98.246	ENSHGLG00000001988	-	83	98.246	Heterocephalus_glaber_female
ENSPKIG00000006092	lsm8	86	91.765	ENSHGLG00000019782	-	89	91.765	Heterocephalus_glaber_female
ENSPKIG00000006092	lsm8	84	96.386	ENSHGLG00100003934	-	83	96.386	Heterocephalus_glaber_male
ENSPKIG00000006092	lsm8	86	92.941	ENSHGLG00100012166	-	88	92.941	Heterocephalus_glaber_male
ENSPKIG00000006092	lsm8	86	95.294	ENSHCOG00000005037	lsm8	89	95.294	Hippocampus_comes
ENSPKIG00000006092	lsm8	86	97.647	ENSIPUG00000019811	NAA38	89	97.647	Ictalurus_punctatus
ENSPKIG00000006092	lsm8	86	85.882	ENSSTOG00000034801	-	79	85.882	Ictidomys_tridecemlineatus
ENSPKIG00000006092	lsm8	86	97.647	ENSSTOG00000009039	LSM8	89	97.647	Ictidomys_tridecemlineatus
ENSPKIG00000006092	lsm8	86	97.647	ENSJJAG00000009031	Lsm8	88	97.647	Jaculus_jaculus
ENSPKIG00000006092	lsm8	86	95.294	ENSKMAG00000018983	lsm8	89	95.294	Kryptolebias_marmoratus
ENSPKIG00000006092	lsm8	100	86.869	ENSLACG00000010231	LSM8	100	86.869	Latimeria_chalumnae
ENSPKIG00000006092	lsm8	86	98.824	ENSLOCG00000015580	lsm8	89	98.824	Lepisosteus_oculatus
ENSPKIG00000006092	lsm8	89	95.455	ENSLAFG00000011242	LSM8	91	95.455	Loxodonta_africana
ENSPKIG00000006092	lsm8	86	97.647	ENSMFAG00000035798	LSM8	100	94.595	Macaca_fascicularis
ENSPKIG00000006092	lsm8	86	94.118	ENSMFAG00000013044	-	89	94.118	Macaca_fascicularis
ENSPKIG00000006092	lsm8	86	97.647	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSPKIG00000006092	lsm8	86	97.647	ENSMNEG00000036764	-	100	94.595	Macaca_nemestrina
ENSPKIG00000006092	lsm8	76	93.333	ENSMNEG00000011141	-	100	93.333	Macaca_nemestrina
ENSPKIG00000006092	lsm8	86	97.647	ENSMLEG00000035828	-	100	94.595	Mandrillus_leucophaeus
ENSPKIG00000006092	lsm8	86	82.353	ENSMLEG00000039324	-	88	82.353	Mandrillus_leucophaeus
ENSPKIG00000006092	lsm8	76	97.333	ENSMAMG00000018839	lsm8	100	97.333	Mastacembelus_armatus
ENSPKIG00000006092	lsm8	86	95.294	ENSMZEG00005019138	lsm8	89	95.294	Maylandia_zebra
ENSPKIG00000006092	lsm8	86	98.824	ENSMGAG00000008808	LSM8	89	98.824	Meleagris_gallopavo
ENSPKIG00000006092	lsm8	73	90.278	ENSMAUG00000020287	-	100	87.838	Mesocricetus_auratus
ENSPKIG00000006092	lsm8	87	79.070	ENSMAUG00000015356	-	88	79.070	Mesocricetus_auratus
ENSPKIG00000006092	lsm8	86	90.588	ENSMAUG00000015721	-	88	90.588	Mesocricetus_auratus
ENSPKIG00000006092	lsm8	86	97.647	ENSMICG00000042730	LSM8	89	97.647	Microcebus_murinus
ENSPKIG00000006092	lsm8	86	97.647	ENSMOCG00000001688	Lsm8	89	97.647	Microtus_ochrogaster
ENSPKIG00000006092	lsm8	76	97.333	ENSMMOG00000006046	lsm8	100	97.333	Mola_mola
ENSPKIG00000006092	lsm8	74	85.333	ENSMODG00000015729	LSM8	96	85.333	Monodelphis_domestica
ENSPKIG00000006092	lsm8	86	96.471	ENSMALG00000000405	lsm8	89	96.471	Monopterus_albus
ENSPKIG00000006092	lsm8	86	97.647	MGP_CAROLIEiJ_G0028125	-	89	97.647	Mus_caroli
ENSPKIG00000006092	lsm8	86	97.647	ENSMUSG00000044155	Lsm8	89	97.647	Mus_musculus
ENSPKIG00000006092	lsm8	86	97.647	MGP_PahariEiJ_G0021881	Lsm8	100	97.333	Mus_pahari
ENSPKIG00000006092	lsm8	86	97.647	MGP_SPRETEiJ_G0029125	-	89	97.647	Mus_spretus
ENSPKIG00000006092	lsm8	86	97.647	ENSMLUG00000006837	-	89	97.647	Myotis_lucifugus
ENSPKIG00000006092	lsm8	86	96.471	ENSMLUG00000027762	-	89	96.471	Myotis_lucifugus
ENSPKIG00000006092	lsm8	86	97.647	ENSNGAG00000016554	Lsm8	89	97.647	Nannospalax_galili
ENSPKIG00000006092	lsm8	86	95.294	ENSNBRG00000014441	lsm8	89	95.294	Neolamprologus_brichardi
ENSPKIG00000006092	lsm8	86	97.647	ENSNLEG00000011768	LSM8	89	97.647	Nomascus_leucogenys
ENSPKIG00000006092	lsm8	86	84.706	ENSMEUG00000007801	LSM8	88	84.706	Notamacropus_eugenii
ENSPKIG00000006092	lsm8	86	97.647	ENSOPRG00000014809	LSM8	100	97.647	Ochotona_princeps
ENSPKIG00000006092	lsm8	76	82.667	ENSODEG00000020290	-	87	82.667	Octodon_degus
ENSPKIG00000006092	lsm8	86	97.647	ENSODEG00000000418	-	89	97.647	Octodon_degus
ENSPKIG00000006092	lsm8	86	97.647	ENSOANG00000014536	LSM8	89	97.647	Ornithorhynchus_anatinus
ENSPKIG00000006092	lsm8	89	95.455	ENSOCUG00000017359	LSM8	91	95.455	Oryctolagus_cuniculus
ENSPKIG00000006092	lsm8	73	97.222	ENSORLG00000017432	lsm8	77	97.222	Oryzias_latipes
ENSPKIG00000006092	lsm8	73	97.222	ENSORLG00020004376	lsm8	77	97.222	Oryzias_latipes_hni
ENSPKIG00000006092	lsm8	86	95.294	ENSORLG00015003757	lsm8	89	95.294	Oryzias_latipes_hsok
ENSPKIG00000006092	lsm8	70	97.101	ENSOMEG00000022509	lsm8	83	93.333	Oryzias_melastigma
ENSPKIG00000006092	lsm8	86	97.647	ENSOGAG00000013377	LSM8	89	97.647	Otolemur_garnettii
ENSPKIG00000006092	lsm8	86	97.647	ENSOARG00000017974	LSM8	89	97.647	Ovis_aries
ENSPKIG00000006092	lsm8	76	97.333	ENSPPAG00000043228	-	100	97.333	Pan_paniscus
ENSPKIG00000006092	lsm8	86	97.647	ENSPPRG00000006444	LSM8	89	97.647	Panthera_pardus
ENSPKIG00000006092	lsm8	86	97.647	ENSPTIG00000004722	LSM8	89	97.647	Panthera_tigris_altaica
ENSPKIG00000006092	lsm8	76	97.333	ENSPTRG00000046596	-	100	97.333	Pan_troglodytes
ENSPKIG00000006092	lsm8	86	92.941	ENSPANG00000019395	-	89	92.941	Papio_anubis
ENSPKIG00000006092	lsm8	86	97.647	ENSPANG00000035470	-	100	94.595	Papio_anubis
ENSPKIG00000006092	lsm8	76	97.333	ENSPSIG00000017054	LSM8	100	97.333	Pelodiscus_sinensis
ENSPKIG00000006092	lsm8	76	97.333	ENSPMGG00000016442	lsm8	100	97.333	Periophthalmus_magnuspinnatus
ENSPKIG00000006092	lsm8	75	94.595	ENSPEMG00000009153	Lsm8	100	94.595	Peromyscus_maniculatus_bairdii
ENSPKIG00000006092	lsm8	83	98.780	ENSPCIG00000021467	LSM8	86	98.780	Phascolarctos_cinereus
ENSPKIG00000006092	lsm8	86	96.471	ENSPFOG00000012340	lsm8	89	96.471	Poecilia_formosa
ENSPKIG00000006092	lsm8	88	95.402	ENSPLAG00000000516	lsm8	91	95.402	Poecilia_latipinna
ENSPKIG00000006092	lsm8	86	96.471	ENSPMEG00000022567	lsm8	89	96.471	Poecilia_mexicana
ENSPKIG00000006092	lsm8	95	74.257	ENSPREG00000005527	lsm8	78	74.257	Poecilia_reticulata
ENSPKIG00000006092	lsm8	86	97.647	ENSPPYG00000017942	LSM8	89	97.647	Pongo_abelii
ENSPKIG00000006092	lsm8	83	76.829	ENSPCOG00000017982	-	84	76.829	Propithecus_coquereli
ENSPKIG00000006092	lsm8	86	97.647	ENSPCOG00000003309	-	89	97.647	Propithecus_coquereli
ENSPKIG00000006092	lsm8	86	96.471	ENSPVAG00000000990	LSM8	100	96.471	Pteropus_vampyrus
ENSPKIG00000006092	lsm8	86	95.294	ENSPNYG00000011448	lsm8	89	95.294	Pundamilia_nyererei
ENSPKIG00000006092	lsm8	86	97.647	ENSPNAG00000010252	lsm8	89	97.647	Pygocentrus_nattereri
ENSPKIG00000006092	lsm8	86	97.647	ENSRNOG00000058677	Lsm8	89	97.647	Rattus_norvegicus
ENSPKIG00000006092	lsm8	86	97.647	ENSRBIG00000032851	LSM8	100	94.595	Rhinopithecus_bieti
ENSPKIG00000006092	lsm8	86	97.647	ENSRROG00000039618	LSM8	100	94.595	Rhinopithecus_roxellana
ENSPKIG00000006092	lsm8	86	97.647	ENSSBOG00000023223	LSM8	100	94.595	Saimiri_boliviensis_boliviensis
ENSPKIG00000006092	lsm8	86	97.647	ENSSHAG00000018435	-	89	97.647	Sarcophilus_harrisii
ENSPKIG00000006092	lsm8	86	96.471	ENSSFOG00015004412	lsm8	89	96.471	Scleropages_formosus
ENSPKIG00000006092	lsm8	76	94.667	ENSSMAG00000009458	lsm8	100	94.667	Scophthalmus_maximus
ENSPKIG00000006092	lsm8	86	95.294	ENSSDUG00000014702	lsm8	89	95.294	Seriola_dumerili
ENSPKIG00000006092	lsm8	76	97.333	ENSSLDG00000016870	lsm8	100	97.333	Seriola_lalandi_dorsalis
ENSPKIG00000006092	lsm8	73	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSPKIG00000006092	lsm8	86	97.647	ENSSPUG00000017419	LSM8	89	97.647	Sphenodon_punctatus
ENSPKIG00000006092	lsm8	86	95.294	ENSSPAG00000021422	lsm8	89	95.294	Stegastes_partitus
ENSPKIG00000006092	lsm8	86	97.647	ENSSSCG00000021652	LSM8	89	97.647	Sus_scrofa
ENSPKIG00000006092	lsm8	86	97.647	ENSTGUG00000016823	-	89	97.647	Taeniopygia_guttata
ENSPKIG00000006092	lsm8	86	98.824	ENSTGUG00000004730	-	89	98.824	Taeniopygia_guttata
ENSPKIG00000006092	lsm8	86	95.294	ENSTRUG00000025192	lsm8	89	95.294	Takifugu_rubripes
ENSPKIG00000006092	lsm8	86	95.294	ENSTNIG00000002864	lsm8	89	95.294	Tetraodon_nigroviridis
ENSPKIG00000006092	lsm8	86	97.647	ENSTTRG00000001023	LSM8	89	97.647	Tursiops_truncatus
ENSPKIG00000006092	lsm8	97	89.583	ENSUAMG00000006943	-	100	89.583	Ursus_americanus
ENSPKIG00000006092	lsm8	93	92.391	ENSUMAG00000003073	LSM8	98	92.391	Ursus_maritimus
ENSPKIG00000006092	lsm8	86	97.647	ENSVPAG00000001530	LSM8	89	97.647	Vicugna_pacos
ENSPKIG00000006092	lsm8	76	94.667	ENSVVUG00000013248	-	82	94.667	Vulpes_vulpes
ENSPKIG00000006092	lsm8	86	97.647	ENSXETG00000021829	lsm8	88	97.647	Xenopus_tropicalis
ENSPKIG00000006092	lsm8	86	95.294	ENSXCOG00000012938	lsm8	89	95.294	Xiphophorus_couchianus
ENSPKIG00000006092	lsm8	86	96.471	ENSXMAG00000025919	lsm8	89	96.471	Xiphophorus_maculatus