EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000006301 (Gene tree)
Gene ID: 111855650
Gene Symbol: pym1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6994 bases
Position: chrPGUA01000004.1:2561920-2568913
Accession: 111855650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022204	Mago-bind	PF09282.10	2.7e-13	1	1
ENSPKIP00000022190	Mago-bind	PF09282.10	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000002861	-	621	-	ENSPKIP00000022204	206 (aa)	-	-
ENSPKIT00000002848	-	5605	-	ENSPKIP00000022190	217 (aa)	XP_023690622	UPI000CD61CF3

Gene Model

Click here to download ENSPKIG00000006301's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006301's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006301	pym1	94	60.000	ENSG00000170473	PYM1	100	60.849	Homo_sapiens
ENSPKIG00000006301	pym1	99	68.224	ENSAPOG00000023045	pym1	99	68.692	Acanthochromis_polyacanthus
ENSPKIG00000006301	pym1	91	58.549	ENSAMEG00000003091	PYM1	99	58.654	Ailuropoda_melanoleuca
ENSPKIG00000006301	pym1	99	68.919	ENSACIG00000012769	pym1	99	71.622	Amphilophus_citrinellus
ENSPKIG00000006301	pym1	99	69.484	ENSAOCG00000021358	pym1	99	69.484	Amphiprion_ocellaris
ENSPKIG00000006301	pym1	99	69.484	ENSAPEG00000022679	pym1	99	69.484	Amphiprion_percula
ENSPKIG00000006301	pym1	99	68.421	ENSATEG00000024022	pym1	99	67.431	Anabas_testudineus
ENSPKIG00000006301	pym1	94	61.058	ENSACAG00000005714	PYM1	100	62.273	Anolis_carolinensis
ENSPKIG00000006301	pym1	94	60.000	ENSANAG00000036967	PYM1	100	60.849	Aotus_nancymaae
ENSPKIG00000006301	pym1	100	68.571	ENSAMXG00000007650	pym1	100	69.048	Astyanax_mexicanus
ENSPKIG00000006301	pym1	94	61.500	ENSBTAG00000031146	PYM1	100	61.321	Bos_taurus
ENSPKIG00000006301	pym1	94	60.000	ENSCJAG00000041077	PYM1	100	60.849	Callithrix_jacchus
ENSPKIG00000006301	pym1	94	61.000	ENSCAFG00000000076	PYM1	100	61.792	Canis_familiaris
ENSPKIG00000006301	pym1	94	61.000	ENSCAFG00020026099	PYM1	100	61.792	Canis_lupus_dingo
ENSPKIG00000006301	pym1	94	62.500	ENSCHIG00000026207	PYM1	100	62.264	Capra_hircus
ENSPKIG00000006301	pym1	94	61.500	ENSTSYG00000000787	PYM1	100	62.264	Carlito_syrichta
ENSPKIG00000006301	pym1	89	57.754	ENSCAPG00000010374	PYM1	100	58.794	Cavia_aperea
ENSPKIG00000006301	pym1	94	59.296	ENSCPOG00000031546	PYM1	100	60.190	Cavia_porcellus
ENSPKIG00000006301	pym1	94	60.000	ENSCCAG00000026187	PYM1	100	60.849	Cebus_capucinus
ENSPKIG00000006301	pym1	94	60.000	ENSCATG00000018801	PYM1	100	60.849	Cercocebus_atys
ENSPKIG00000006301	pym1	94	59.901	ENSCLAG00000007964	PYM1	100	61.215	Chinchilla_lanigera
ENSPKIG00000006301	pym1	89	58.730	ENSCSAG00000005291	PYM1	98	60.199	Chlorocebus_sabaeus
ENSPKIG00000006301	pym1	98	39.423	ENSCING00000006448	-	99	40.639	Ciona_intestinalis
ENSPKIG00000006301	pym1	98	35.294	ENSCSAVG00000009805	-	94	38.914	Ciona_savignyi
ENSPKIG00000006301	pym1	94	60.000	ENSCANG00000020338	-	100	60.849	Colobus_angolensis_palliatus
ENSPKIG00000006301	pym1	98	57.005	ENSCANG00000019757	-	90	57.005	Colobus_angolensis_palliatus
ENSPKIG00000006301	pym1	88	53.039	ENSCGRG00001004231	-	94	54.545	Cricetulus_griseus_chok1gshd
ENSPKIG00000006301	pym1	94	61.692	ENSCGRG00001018051	-	100	62.559	Cricetulus_griseus_chok1gshd
ENSPKIG00000006301	pym1	94	61.692	ENSCGRG00000012495	-	100	62.559	Cricetulus_griseus_crigri
ENSPKIG00000006301	pym1	88	53.039	ENSCGRG00000018933	-	94	54.545	Cricetulus_griseus_crigri
ENSPKIG00000006301	pym1	94	66.000	ENSCSEG00000021531	pym1	99	68.056	Cynoglossus_semilaevis
ENSPKIG00000006301	pym1	98	66.184	ENSCVAG00000017360	pym1	88	65.728	Cyprinodon_variegatus
ENSPKIG00000006301	pym1	99	59.709	ENSDARG00000046024	pym1	98	55.505	Danio_rerio
ENSPKIG00000006301	pym1	93	60.406	ENSDNOG00000048414	PYM1	92	60.377	Dasypus_novemcinctus
ENSPKIG00000006301	pym1	94	60.000	ENSDORG00000029448	Pym1	100	60.849	Dipodomys_ordii
ENSPKIG00000006301	pym1	99	31.111	FBgn0034918	Pym	98	31.651	Drosophila_melanogaster
ENSPKIG00000006301	pym1	89	56.842	ENSETEG00000004461	-	100	57.426	Echinops_telfairi
ENSPKIG00000006301	pym1	92	56.923	ENSEASG00005002271	PYM1	86	60.302	Equus_asinus_asinus
ENSPKIG00000006301	pym1	94	61.500	ENSECAG00000011870	PYM1	100	62.264	Equus_caballus
ENSPKIG00000006301	pym1	96	65.990	ENSELUG00000024250	pym1	99	68.116	Esox_lucius
ENSPKIG00000006301	pym1	94	60.500	ENSFCAG00000013967	PYM1	100	61.321	Felis_catus
ENSPKIG00000006301	pym1	94	59.500	ENSFDAG00000006314	PYM1	100	60.377	Fukomys_damarensis
ENSPKIG00000006301	pym1	94	66.176	ENSFHEG00000005884	pym1	99	69.484	Fundulus_heteroclitus
ENSPKIG00000006301	pym1	94	63.500	ENSGMOG00000007239	pym1	98	63.507	Gadus_morhua
ENSPKIG00000006301	pym1	94	69.849	ENSGALG00000046169	PYM1	100	70.142	Gallus_gallus
ENSPKIG00000006301	pym1	99	67.273	ENSGAFG00000003280	pym1	99	67.442	Gambusia_affinis
ENSPKIG00000006301	pym1	100	60.577	ENSGACG00000010703	pym1	99	61.353	Gasterosteus_aculeatus
ENSPKIG00000006301	pym1	92	59.701	ENSGAGG00000001973	PYM1	93	61.009	Gopherus_agassizii
ENSPKIG00000006301	pym1	94	60.000	ENSGGOG00000043246	PYM1	100	60.849	Gorilla_gorilla
ENSPKIG00000006301	pym1	94	68.095	ENSHBUG00000012719	pym1	99	69.231	Haplochromis_burtoni
ENSPKIG00000006301	pym1	93	59.391	ENSHGLG00000017155	PYM1	100	59.434	Heterocephalus_glaber_female
ENSPKIG00000006301	pym1	93	59.391	ENSHGLG00100015341	PYM1	100	59.434	Heterocephalus_glaber_male
ENSPKIG00000006301	pym1	99	65.094	ENSHCOG00000007987	pym1	85	65.094	Hippocampus_comes
ENSPKIG00000006301	pym1	100	65.899	ENSIPUG00000005975	wibga	100	65.899	Ictalurus_punctatus
ENSPKIG00000006301	pym1	94	60.697	ENSSTOG00000014206	PYM1	100	60.849	Ictidomys_tridecemlineatus
ENSPKIG00000006301	pym1	94	60.406	ENSJJAG00000013338	Pym1	100	61.244	Jaculus_jaculus
ENSPKIG00000006301	pym1	100	65.368	ENSKMAG00000006351	pym1	100	65.801	Kryptolebias_marmoratus
ENSPKIG00000006301	pym1	99	65.714	ENSLBEG00000015707	pym1	99	65.714	Labrus_bergylta
ENSPKIG00000006301	pym1	90	62.189	ENSLACG00000014398	PYM1	95	63.380	Latimeria_chalumnae
ENSPKIG00000006301	pym1	94	61.000	ENSLAFG00000002369	PYM1	100	61.792	Loxodonta_africana
ENSPKIG00000006301	pym1	94	60.000	ENSMFAG00000003048	PYM1	100	60.849	Macaca_fascicularis
ENSPKIG00000006301	pym1	94	60.000	ENSMMUG00000011002	PYM1	100	60.849	Macaca_mulatta
ENSPKIG00000006301	pym1	94	60.000	ENSMNEG00000034677	PYM1	100	60.849	Macaca_nemestrina
ENSPKIG00000006301	pym1	94	60.000	ENSMLEG00000007971	PYM1	100	60.849	Mandrillus_leucophaeus
ENSPKIG00000006301	pym1	99	66.514	ENSMAMG00000001588	pym1	99	66.514	Mastacembelus_armatus
ENSPKIG00000006301	pym1	94	67.619	ENSMZEG00005026458	pym1	99	68.778	Maylandia_zebra
ENSPKIG00000006301	pym1	94	60.697	ENSMAUG00000007318	Pym1	100	61.972	Mesocricetus_auratus
ENSPKIG00000006301	pym1	94	59.500	ENSMICG00000032962	PYM1	100	60.377	Microcebus_murinus
ENSPKIG00000006301	pym1	94	59.296	ENSMOCG00000010208	Pym1	100	60.377	Microtus_ochrogaster
ENSPKIG00000006301	pym1	99	63.902	ENSMMOG00000009301	pym1	99	66.829	Mola_mola
ENSPKIG00000006301	pym1	99	68.950	ENSMALG00000013496	pym1	99	68.950	Monopterus_albus
ENSPKIG00000006301	pym1	93	61.929	MGP_CAROLIEiJ_G0015953	Pym1	100	61.792	Mus_caroli
ENSPKIG00000006301	pym1	93	61.616	ENSMUSG00000064030	Pym1	100	61.502	Mus_musculus
ENSPKIG00000006301	pym1	93	63.452	MGP_PahariEiJ_G0031131	Pym1	100	63.208	Mus_pahari
ENSPKIG00000006301	pym1	93	61.421	MGP_SPRETEiJ_G0016778	Pym1	100	61.321	Mus_spretus
ENSPKIG00000006301	pym1	94	60.500	ENSMPUG00000000931	PYM1	100	61.321	Mustela_putorius_furo
ENSPKIG00000006301	pym1	93	58.163	ENSMLUG00000003586	PYM1	100	58.294	Myotis_lucifugus
ENSPKIG00000006301	pym1	90	58.333	ENSNGAG00000019207	Pym1	94	59.314	Nannospalax_galili
ENSPKIG00000006301	pym1	99	68.326	ENSNBRG00000006951	pym1	99	69.231	Neolamprologus_brichardi
ENSPKIG00000006301	pym1	94	60.000	ENSNLEG00000017588	PYM1	100	60.849	Nomascus_leucogenys
ENSPKIG00000006301	pym1	88	54.054	ENSMEUG00000001017	PYM1	100	54.271	Notamacropus_eugenii
ENSPKIG00000006301	pym1	92	58.462	ENSOPRG00000007797	PYM1	97	59.420	Ochotona_princeps
ENSPKIG00000006301	pym1	94	59.701	ENSODEG00000004289	PYM1	100	60.563	Octodon_degus
ENSPKIG00000006301	pym1	94	67.606	ENSONIG00000016740	pym1	99	68.750	Oreochromis_niloticus
ENSPKIG00000006301	pym1	89	60.209	ENSOCUG00000025969	PYM1	86	61.084	Oryctolagus_cuniculus
ENSPKIG00000006301	pym1	99	68.900	ENSORLG00000030592	pym1	99	68.900	Oryzias_latipes
ENSPKIG00000006301	pym1	99	68.720	ENSORLG00020011264	pym1	99	69.124	Oryzias_latipes_hni
ENSPKIG00000006301	pym1	99	70.192	ENSORLG00015005287	pym1	99	70.192	Oryzias_latipes_hsok
ENSPKIG00000006301	pym1	99	65.315	ENSOMEG00000022250	pym1	99	66.228	Oryzias_melastigma
ENSPKIG00000006301	pym1	89	59.259	ENSOGAG00000007038	PYM1	94	60.199	Otolemur_garnettii
ENSPKIG00000006301	pym1	94	61.500	ENSOARG00000010856	PYM1	100	62.264	Ovis_aries
ENSPKIG00000006301	pym1	94	60.000	ENSPPAG00000043630	PYM1	100	60.849	Pan_paniscus
ENSPKIG00000006301	pym1	94	62.000	ENSPPRG00000013243	PYM1	100	62.736	Panthera_pardus
ENSPKIG00000006301	pym1	94	60.500	ENSPTIG00000017380	PYM1	100	61.321	Panthera_tigris_altaica
ENSPKIG00000006301	pym1	94	60.000	ENSPTRG00000005067	PYM1	100	60.849	Pan_troglodytes
ENSPKIG00000006301	pym1	94	60.500	ENSPANG00000009562	PYM1	100	61.321	Papio_anubis
ENSPKIG00000006301	pym1	94	58.824	ENSPSIG00000003043	PYM1	100	60.185	Pelodiscus_sinensis
ENSPKIG00000006301	pym1	100	65.877	ENSPMGG00000023161	pym1	100	65.877	Periophthalmus_magnuspinnatus
ENSPKIG00000006301	pym1	94	61.692	ENSPEMG00000009372	Pym1	100	62.911	Peromyscus_maniculatus_bairdii
ENSPKIG00000006301	pym1	88	55.676	ENSPCIG00000024658	PYM1	93	56.436	Phascolarctos_cinereus
ENSPKIG00000006301	pym1	99	67.606	ENSPFOG00000008193	pym1	99	68.075	Poecilia_formosa
ENSPKIG00000006301	pym1	99	67.606	ENSPLAG00000009228	pym1	99	68.075	Poecilia_latipinna
ENSPKIG00000006301	pym1	99	67.606	ENSPMEG00000001505	pym1	99	68.075	Poecilia_mexicana
ENSPKIG00000006301	pym1	90	60.209	ENSPPYG00000004635	PYM1	98	61.194	Pongo_abelii
ENSPKIG00000006301	pym1	94	60.500	ENSPCOG00000019706	PYM1	100	61.321	Propithecus_coquereli
ENSPKIG00000006301	pym1	90	59.474	ENSPVAG00000011437	PYM1	98	60.396	Pteropus_vampyrus
ENSPKIG00000006301	pym1	94	68.657	ENSPNYG00000012871	pym1	99	69.340	Pundamilia_nyererei
ENSPKIG00000006301	pym1	100	67.442	ENSPNAG00000018833	pym1	100	66.977	Pygocentrus_nattereri
ENSPKIG00000006301	pym1	79	53.571	ENSRNOG00000049415	AABR07055413.1	100	50.000	Rattus_norvegicus
ENSPKIG00000006301	pym1	92	60.513	ENSRNOG00000058130	Pym1	98	60.952	Rattus_norvegicus
ENSPKIG00000006301	pym1	94	56.000	ENSRBIG00000033362	PYM1	100	57.075	Rhinopithecus_bieti
ENSPKIG00000006301	pym1	94	60.000	ENSRROG00000043620	PYM1	100	60.849	Rhinopithecus_roxellana
ENSPKIG00000006301	pym1	94	60.000	ENSSBOG00000029393	PYM1	100	60.849	Saimiri_boliviensis_boliviensis
ENSPKIG00000006301	pym1	93	57.071	ENSSHAG00000008280	PYM1	100	57.277	Sarcophilus_harrisii
ENSPKIG00000006301	pym1	93	75.385	ENSSFOG00015021475	pym1	99	76.077	Scleropages_formosus
ENSPKIG00000006301	pym1	99	67.773	ENSSMAG00000020912	pym1	99	68.807	Scophthalmus_maximus
ENSPKIG00000006301	pym1	99	66.216	ENSSDUG00000001807	pym1	99	67.713	Seriola_dumerili
ENSPKIG00000006301	pym1	99	65.438	ENSSLDG00000013730	pym1	99	67.111	Seriola_lalandi_dorsalis
ENSPKIG00000006301	pym1	89	59.259	ENSSARG00000009569	PYM1	100	61.194	Sorex_araneus
ENSPKIG00000006301	pym1	90	57.949	ENSSPUG00000015059	PYM1	97	58.095	Sphenodon_punctatus
ENSPKIG00000006301	pym1	99	68.056	ENSSPAG00000020100	pym1	99	68.519	Stegastes_partitus
ENSPKIG00000006301	pym1	94	62.189	ENSSSCG00000040825	PYM1	100	62.911	Sus_scrofa
ENSPKIG00000006301	pym1	99	69.856	ENSTRUG00000021367	pym1	100	69.856	Takifugu_rubripes
ENSPKIG00000006301	pym1	99	64.532	ENSTNIG00000012534	pym1	98	64.532	Tetraodon_nigroviridis
ENSPKIG00000006301	pym1	88	56.684	ENSTBEG00000004208	PYM1	100	56.436	Tupaia_belangeri
ENSPKIG00000006301	pym1	90	59.788	ENSTTRG00000014971	PYM1	98	61.386	Tursiops_truncatus
ENSPKIG00000006301	pym1	94	60.500	ENSUAMG00000014521	PYM1	100	61.321	Ursus_americanus
ENSPKIG00000006301	pym1	88	59.358	ENSUMAG00000016241	PYM1	86	59.500	Ursus_maritimus
ENSPKIG00000006301	pym1	94	60.500	ENSVVUG00000022749	PYM1	100	60.849	Vulpes_vulpes
ENSPKIG00000006301	pym1	94	58.049	ENSXETG00000021850	pym1	100	62.136	Xenopus_tropicalis
ENSPKIG00000006301	pym1	99	66.667	ENSXMAG00000011649	pym1	99	67.136	Xiphophorus_maculatus