EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006305 (Gene tree)
Gene ID: 111854471
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 38754 bases
Position: chrPGUA01000276.1:411357-450110
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022522	ResIII	PF04851.15	1.4e-07	1	1
ENSPKIP00000022294	ResIII	PF04851.15	1.6e-07	1	1
ENSPKIP00000022389	ResIII	PF04851.15	1.6e-07	1	1
ENSPKIP00000022540	ResIII	PF04851.15	1.6e-07	1	1
ENSPKIP00000022212	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003054	-	9815	-	ENSPKIP00000022389	2027 (aa)	-	-
ENSPKIT00000002870	-	9887	-	ENSPKIP00000022212	2045 (aa)	-	-
ENSPKIT00000003207	-	6972	-	ENSPKIP00000022540	2032 (aa)	-	-
ENSPKIT00000002953	-	10601	-	ENSPKIP00000022294	1998 (aa)	-	-
ENSPKIT00000003189	-	5436	-	ENSPKIP00000022522	1811 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006305	chd3	92	73.361	ENSPKIG00000004282	chd5	91	77.912
ENSPKIG00000006305	chd3	91	65.752	ENSPKIG00000012023	-	92	65.831
ENSPKIG00000006305	chd3	91	78.873	ENSPKIG00000008268	chd4a	93	67.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006305	chd3	99	79.332	ENSG00000170004	CHD3	93	80.474	Homo_sapiens
ENSPKIG00000006305	chd3	87	85.242	ENSAPOG00000005614	chd3	94	90.674	Acanthochromis_polyacanthus
ENSPKIG00000006305	chd3	70	77.151	ENSAMEG00000003025	-	100	77.367	Ailuropoda_melanoleuca
ENSPKIG00000006305	chd3	84	89.118	ENSACIG00000019671	chd3	99	92.432	Amphilophus_citrinellus
ENSPKIG00000006305	chd3	95	90.031	ENSAOCG00000023784	chd3	97	91.710	Amphiprion_ocellaris
ENSPKIG00000006305	chd3	95	89.720	ENSAPEG00000006341	chd3	100	83.133	Amphiprion_percula
ENSPKIG00000006305	chd3	96	89.547	ENSATEG00000000848	chd3	95	92.105	Anabas_testudineus
ENSPKIG00000006305	chd3	99	79.428	ENSACAG00000004276	CHD3	94	77.447	Anolis_carolinensis
ENSPKIG00000006305	chd3	97	79.334	ENSANAG00000034323	CHD3	99	76.687	Aotus_nancymaae
ENSPKIG00000006305	chd3	99	83.426	ENSACLG00000009222	chd3	88	95.817	Astatotilapia_calliptera
ENSPKIG00000006305	chd3	99	79.102	ENSBTAG00000014377	CHD3	93	79.952	Bos_taurus
ENSPKIG00000006305	chd3	99	79.409	ENSCJAG00000014766	CHD3	93	80.553	Callithrix_jacchus
ENSPKIG00000006305	chd3	99	79.180	ENSCAFG00000016859	CHD3	97	75.374	Canis_familiaris
ENSPKIG00000006305	chd3	96	80.095	ENSCAFG00020007422	CHD3	100	76.188	Canis_lupus_dingo
ENSPKIG00000006305	chd3	99	79.102	ENSCHIG00000016737	CHD3	98	75.125	Capra_hircus
ENSPKIG00000006305	chd3	99	79.183	ENSTSYG00000035658	CHD3	93	80.364	Carlito_syrichta
ENSPKIG00000006305	chd3	99	75.464	ENSCAPG00000014864	CHD3	97	72.695	Cavia_aperea
ENSPKIG00000006305	chd3	99	79.102	ENSCPOG00000022653	CHD3	93	79.102	Cavia_porcellus
ENSPKIG00000006305	chd3	99	79.565	ENSCCAG00000034792	CHD3	94	79.489	Cebus_capucinus
ENSPKIG00000006305	chd3	99	79.254	ENSCATG00000041717	CHD3	93	80.681	Cercocebus_atys
ENSPKIG00000006305	chd3	99	80.538	ENSCLAG00000010523	CHD3	95	80.459	Chinchilla_lanigera
ENSPKIG00000006305	chd3	99	79.102	ENSCSAG00000011122	CHD3	99	75.562	Chlorocebus_sabaeus
ENSPKIG00000006305	chd3	84	93.836	ENSCPBG00000011966	CHD3	96	93.878	Chrysemys_picta_bellii
ENSPKIG00000006305	chd3	99	79.102	ENSCANG00000037641	CHD3	93	80.681	Colobus_angolensis_palliatus
ENSPKIG00000006305	chd3	99	80.189	ENSCGRG00001011306	Chd3	95	80.189	Cricetulus_griseus_chok1gshd
ENSPKIG00000006305	chd3	99	73.618	ENSCGRG00000007878	Chd3	97	70.255	Cricetulus_griseus_crigri
ENSPKIG00000006305	chd3	94	85.930	ENSCSEG00000004489	chd3	100	86.196	Cynoglossus_semilaevis
ENSPKIG00000006305	chd3	85	90.763	ENSCVAG00000007293	chd3	95	91.429	Cyprinodon_variegatus
ENSPKIG00000006305	chd3	99	87.011	ENSDARG00000021405	chd3	99	87.095	Danio_rerio
ENSPKIG00000006305	chd3	94	73.910	ENSDNOG00000047846	CHD3	90	74.023	Dasypus_novemcinctus
ENSPKIG00000006305	chd3	99	80.381	ENSDORG00000010713	Chd3	95	80.461	Dipodomys_ordii
ENSPKIG00000006305	chd3	98	76.278	ENSETEG00000017733	CHD3	95	76.278	Echinops_telfairi
ENSPKIG00000006305	chd3	76	68.325	ENSEBUG00000008310	chd3	99	69.108	Eptatretus_burgeri
ENSPKIG00000006305	chd3	94	78.870	ENSEASG00005019360	CHD3	97	79.025	Equus_asinus_asinus
ENSPKIG00000006305	chd3	94	79.025	ENSECAG00000010051	CHD3	97	79.102	Equus_caballus
ENSPKIG00000006305	chd3	87	92.857	ENSEEUG00000015205	CHD3	82	92.857	Erinaceus_europaeus
ENSPKIG00000006305	chd3	80	95.946	ENSELUG00000019499	chd3	99	95.918	Esox_lucius
ENSPKIG00000006305	chd3	99	79.209	ENSFCAG00000009629	CHD3	91	79.209	Felis_catus
ENSPKIG00000006305	chd3	96	79.180	ENSFDAG00000008220	CHD3	98	74.177	Fukomys_damarensis
ENSPKIG00000006305	chd3	91	85.798	ENSGMOG00000013599	chd3	91	85.976	Gadus_morhua
ENSPKIG00000006305	chd3	60	82.643	ENSGAFG00000004055	chd3	99	84.867	Gambusia_affinis
ENSPKIG00000006305	chd3	99	81.889	ENSGACG00000019275	chd3	95	82.135	Gasterosteus_aculeatus
ENSPKIG00000006305	chd3	73	86.327	ENSGAGG00000013164	CHD3	95	86.327	Gopherus_agassizii
ENSPKIG00000006305	chd3	99	79.332	ENSGGOG00000013496	CHD3	97	76.882	Gorilla_gorilla
ENSPKIG00000006305	chd3	99	80.268	ENSHGLG00000012017	CHD3	98	75.412	Heterocephalus_glaber_female
ENSPKIG00000006305	chd3	88	73.494	ENSHGLG00100013902	CHD3	94	71.759	Heterocephalus_glaber_male
ENSPKIG00000006305	chd3	97	79.273	ENSHCOG00000010170	chd3	99	79.622	Hippocampus_comes
ENSPKIG00000006305	chd3	92	82.397	ENSIPUG00000003271	chd3	95	89.396	Ictalurus_punctatus
ENSPKIG00000006305	chd3	99	80.095	ENSSTOG00000025907	CHD3	95	80.095	Ictidomys_tridecemlineatus
ENSPKIG00000006305	chd3	99	79.421	ENSJJAG00000017633	Chd3	99	75.612	Jaculus_jaculus
ENSPKIG00000006305	chd3	89	94.554	ENSKMAG00000019292	chd3	95	90.179	Kryptolebias_marmoratus
ENSPKIG00000006305	chd3	88	92.339	ENSLBEG00000028485	chd3	91	92.276	Labrus_bergylta
ENSPKIG00000006305	chd3	98	73.364	ENSLACG00000008031	CHD3	97	71.813	Latimeria_chalumnae
ENSPKIG00000006305	chd3	100	84.068	ENSLOCG00000013965	chd3	100	83.632	Lepisosteus_oculatus
ENSPKIG00000006305	chd3	96	79.201	ENSLAFG00000000572	CHD3	95	80.165	Loxodonta_africana
ENSPKIG00000006305	chd3	99	79.254	ENSMFAG00000020113	CHD3	97	78.019	Macaca_fascicularis
ENSPKIG00000006305	chd3	99	77.545	ENSMMUG00000022221	CHD3	94	77.665	Macaca_mulatta
ENSPKIG00000006305	chd3	99	79.254	ENSMNEG00000001728	CHD3	97	78.406	Macaca_nemestrina
ENSPKIG00000006305	chd3	99	79.254	ENSMLEG00000032249	CHD3	93	80.681	Mandrillus_leucophaeus
ENSPKIG00000006305	chd3	87	85.065	ENSMAMG00000000564	chd3	95	93.158	Mastacembelus_armatus
ENSPKIG00000006305	chd3	99	80.347	ENSMAUG00000013873	Chd3	97	77.562	Mesocricetus_auratus
ENSPKIG00000006305	chd3	99	80.364	ENSMICG00000008741	CHD3	94	79.257	Microcebus_murinus
ENSPKIG00000006305	chd3	99	80.285	ENSMOCG00000004848	Chd3	95	80.364	Microtus_ochrogaster
ENSPKIG00000006305	chd3	89	92.364	ENSMMOG00000012699	chd3	96	83.685	Mola_mola
ENSPKIG00000006305	chd3	94	80.714	ENSMODG00000007509	CHD3	97	80.714	Monodelphis_domestica
ENSPKIG00000006305	chd3	99	80.205	MGP_CAROLIEiJ_G0016564	Chd3	98	78.689	Mus_caroli
ENSPKIG00000006305	chd3	99	80.063	ENSMUSG00000018474	Chd3	95	81.011	Mus_musculus
ENSPKIG00000006305	chd3	99	80.079	MGP_PahariEiJ_G0017695	Chd3	95	81.174	Mus_pahari
ENSPKIG00000006305	chd3	99	80.063	MGP_SPRETEiJ_G0017400	Chd3	95	81.011	Mus_spretus
ENSPKIG00000006305	chd3	88	79.257	ENSMPUG00000008861	CHD3	100	76.441	Mustela_putorius_furo
ENSPKIG00000006305	chd3	99	79.567	ENSMLUG00000014643	-	93	79.567	Myotis_lucifugus
ENSPKIG00000006305	chd3	99	79.334	ENSNGAG00000000773	Chd3	97	75.362	Nannospalax_galili
ENSPKIG00000006305	chd3	82	92.553	ENSNBRG00000000636	chd3	93	86.863	Neolamprologus_brichardi
ENSPKIG00000006305	chd3	98	77.733	ENSNLEG00000009770	CHD3	99	74.156	Nomascus_leucogenys
ENSPKIG00000006305	chd3	85	88.479	ENSMEUG00000005852	CHD3	81	88.479	Notamacropus_eugenii
ENSPKIG00000006305	chd3	96	78.183	ENSOPRG00000011069	CHD3	97	78.183	Ochotona_princeps
ENSPKIG00000006305	chd3	99	79.257	ENSODEG00000017785	CHD3	98	75.262	Octodon_degus
ENSPKIG00000006305	chd3	98	84.320	ENSONIG00000009292	chd3	99	83.419	Oreochromis_niloticus
ENSPKIG00000006305	chd3	99	74.904	ENSOCUG00000029299	CHD3	96	75.270	Oryctolagus_cuniculus
ENSPKIG00000006305	chd3	83	78.011	ENSORLG00000007107	chd3	93	81.860	Oryzias_latipes
ENSPKIG00000006305	chd3	57	94.398	ENSORLG00020008387	chd3	89	94.398	Oryzias_latipes_hni
ENSPKIG00000006305	chd3	80	87.536	ENSOMEG00000013691	chd3	99	82.609	Oryzias_melastigma
ENSPKIG00000006305	chd3	99	79.102	ENSOGAG00000003216	CHD3	99	75.224	Otolemur_garnettii
ENSPKIG00000006305	chd3	99	78.362	ENSOARG00000017855	CHD3	94	78.362	Ovis_aries
ENSPKIG00000006305	chd3	99	77.128	ENSPPAG00000032886	CHD3	97	76.684	Pan_paniscus
ENSPKIG00000006305	chd3	99	80.079	ENSPPRG00000000626	CHD3	93	80.079	Panthera_pardus
ENSPKIG00000006305	chd3	99	79.332	ENSPTRG00000008714	CHD3	97	76.806	Pan_troglodytes
ENSPKIG00000006305	chd3	99	79.102	ENSPANG00000023938	CHD3	97	78.019	Papio_anubis
ENSPKIG00000006305	chd3	56	90.476	ENSPSIG00000010177	CHD3	93	90.476	Pelodiscus_sinensis
ENSPKIG00000006305	chd3	99	78.797	ENSPEMG00000014262	Chd3	98	75.012	Peromyscus_maniculatus_bairdii
ENSPKIG00000006305	chd3	99	80.714	ENSPCIG00000005442	CHD3	92	91.500	Phascolarctos_cinereus
ENSPKIG00000006305	chd3	93	90.625	ENSPFOG00000012464	chd3	97	82.280	Poecilia_formosa
ENSPKIG00000006305	chd3	90	91.463	ENSPLAG00000002887	chd3	95	93.827	Poecilia_latipinna
ENSPKIG00000006305	chd3	54	87.052	ENSPMEG00000016725	chd3	86	95.000	Poecilia_mexicana
ENSPKIG00000006305	chd3	95	89.468	ENSPREG00000011044	chd3	97	88.411	Poecilia_reticulata
ENSPKIG00000006305	chd3	99	77.477	ENSPPYG00000007940	CHD3	95	77.477	Pongo_abelii
ENSPKIG00000006305	chd3	95	78.786	ENSPCAG00000004350	CHD3	95	78.190	Procavia_capensis
ENSPKIG00000006305	chd3	99	79.593	ENSPCOG00000020952	CHD3	94	79.257	Propithecus_coquereli
ENSPKIG00000006305	chd3	82	89.373	ENSPVAG00000016344	CHD3	79	89.373	Pteropus_vampyrus
ENSPKIG00000006305	chd3	97	91.193	ENSPNAG00000020393	chd3	99	93.018	Pygocentrus_nattereri
ENSPKIG00000006305	chd3	94	79.134	ENSRNOG00000009722	Chd3	97	79.134	Rattus_norvegicus
ENSPKIG00000006305	chd3	99	77.176	ENSRBIG00000033562	CHD3	97	77.034	Rhinopithecus_bieti
ENSPKIG00000006305	chd3	99	79.254	ENSRROG00000029554	CHD3	99	75.039	Rhinopithecus_roxellana
ENSPKIG00000006305	chd3	99	79.409	ENSSBOG00000020719	CHD3	97	78.638	Saimiri_boliviensis_boliviensis
ENSPKIG00000006305	chd3	99	80.443	ENSSHAG00000014412	CHD3	95	80.443	Sarcophilus_harrisii
ENSPKIG00000006305	chd3	88	96.429	ENSSFOG00015023123	chd3	94	88.962	Scleropages_formosus
ENSPKIG00000006305	chd3	92	83.608	ENSSMAG00000006451	chd3	95	92.632	Scophthalmus_maximus
ENSPKIG00000006305	chd3	55	94.000	ENSSDUG00000005792	chd3	90	94.000	Seriola_dumerili
ENSPKIG00000006305	chd3	94	90.592	ENSSPAG00000013694	chd3	98	93.085	Stegastes_partitus
ENSPKIG00000006305	chd3	99	79.412	ENSSSCG00000021363	CHD3	96	80.882	Sus_scrofa
ENSPKIG00000006305	chd3	79	79.697	ENSTRUG00000014990	chd3	97	79.951	Takifugu_rubripes
ENSPKIG00000006305	chd3	95	89.297	ENSTNIG00000012998	chd3	95	84.464	Tetraodon_nigroviridis
ENSPKIG00000006305	chd3	62	89.918	ENSTBEG00000011454	-	70	90.431	Tupaia_belangeri
ENSPKIG00000006305	chd3	98	78.870	ENSTTRG00000010295	CHD3	95	77.059	Tursiops_truncatus
ENSPKIG00000006305	chd3	94	78.859	ENSUAMG00000005475	CHD3	96	81.890	Ursus_americanus
ENSPKIG00000006305	chd3	57	89.164	ENSVPAG00000010794	-	61	95.918	Vicugna_pacos
ENSPKIG00000006305	chd3	95	81.466	ENSVVUG00000028011	CHD3	98	76.203	Vulpes_vulpes
ENSPKIG00000006305	chd3	99	72.311	ENSXETG00000012991	chd3	95	68.967	Xenopus_tropicalis
ENSPKIG00000006305	chd3	55	95.247	ENSXCOG00000000809	chd3	88	95.247	Xiphophorus_couchianus
ENSPKIG00000006305	chd3	83	94.054	ENSXMAG00000016035	chd3	99	94.022	Xiphophorus_maculatus