EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006412 (Gene tree)
Gene ID: 111855124
Gene Symbol: snrpd3l
Alias: -
Full Name: small nuclear ribonucleoprotein D3 polypeptide
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 3721 bases
Position: chrPGUA01000288.1:2267-5987
Accession: 111855124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022382	LSM	PF01423.22	4.9e-15	1	1
ENSPKIP00000022402	LSM	PF01423.22	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003045	-	2060	-	ENSPKIP00000022382	127 (aa)	XP_023689585	UPI000CD62CC3
ENSPKIT00000003066	-	387	-	ENSPKIP00000022402	128 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006412's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006412	snrpd3l	65	31.325	ENSPKIG00000021610	snrpd1	89	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006412	snrpd3l	100	96.850	ENSG00000100028	SNRPD3	100	96.850	Homo_sapiens
ENSPKIG00000006412	snrpd3l	100	97.638	ENSAPOG00000007512	snrpd3l	100	97.638	Acanthochromis_polyacanthus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSAMEG00000013935	SNRPD3	100	96.850	Ailuropoda_melanoleuca
ENSPKIG00000006412	snrpd3l	100	97.638	ENSACIG00000008871	snrpd3l	100	97.638	Amphilophus_citrinellus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSAOCG00000022442	-	100	97.638	Amphiprion_ocellaris
ENSPKIG00000006412	snrpd3l	100	97.638	ENSAOCG00000008497	SNRPD3	100	97.638	Amphiprion_ocellaris
ENSPKIG00000006412	snrpd3l	100	97.638	ENSAOCG00000016743	snrpd3l	100	97.638	Amphiprion_ocellaris
ENSPKIG00000006412	snrpd3l	83	98.113	ENSAOCG00000016759	-	98	98.113	Amphiprion_ocellaris
ENSPKIG00000006412	snrpd3l	100	97.638	ENSAPEG00000006273	snrpd3l	100	97.638	Amphiprion_percula
ENSPKIG00000006412	snrpd3l	83	98.113	ENSAPEG00000006260	-	98	98.113	Amphiprion_percula
ENSPKIG00000006412	snrpd3l	100	97.638	ENSATEG00000020556	snrpd3l	91	97.638	Anabas_testudineus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSAPLG00000008670	SNRPD3	100	96.850	Anas_platyrhynchos
ENSPKIG00000006412	snrpd3l	100	96.850	ENSANAG00000026106	SNRPD3	100	96.850	Aotus_nancymaae
ENSPKIG00000006412	snrpd3l	100	97.638	ENSACLG00000021295	snrpd3l	100	97.638	Astatotilapia_calliptera
ENSPKIG00000006412	snrpd3l	100	96.875	ENSAMXG00000038984	snrpd3l	100	96.875	Astyanax_mexicanus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSBTAG00000021262	SNRPD3	100	96.850	Bos_taurus
ENSPKIG00000006412	snrpd3l	90	64.348	WBGene00004914	snr-1	68	70.652	Caenorhabditis_elegans
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCJAG00000009630	SNRPD3	100	96.850	Callithrix_jacchus
ENSPKIG00000006412	snrpd3l	100	96.063	ENSCAFG00000017258	-	100	96.063	Canis_familiaris
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCAFG00000013864	-	100	96.850	Canis_familiaris
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCAFG00020007165	-	100	96.850	Canis_lupus_dingo
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCHIG00000000057	SNRPD3	100	96.850	Capra_hircus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSTSYG00000007649	SNRPD3	100	96.850	Carlito_syrichta
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCAPG00000016432	-	100	96.850	Cavia_aperea
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCPOG00000033102	-	100	96.850	Cavia_porcellus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCCAG00000035006	SNRPD3	100	96.850	Cebus_capucinus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCATG00000038878	SNRPD3	100	96.850	Cercocebus_atys
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCLAG00000011403	SNRPD3	100	96.850	Chinchilla_lanigera
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCSAG00000010694	SNRPD3	100	96.850	Chlorocebus_sabaeus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCPBG00000002065	SNRPD3	100	96.850	Chrysemys_picta_bellii
ENSPKIG00000006412	snrpd3l	84	78.505	ENSCSAVG00000004708	-	80	78.505	Ciona_savignyi
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCANG00000032106	SNRPD3	100	96.850	Colobus_angolensis_palliatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCGRG00001021990	Snrpd3	100	96.850	Cricetulus_griseus_chok1gshd
ENSPKIG00000006412	snrpd3l	100	96.850	ENSCGRG00000004280	Snrpd3	100	96.850	Cricetulus_griseus_crigri
ENSPKIG00000006412	snrpd3l	100	97.638	ENSCVAG00000001276	snrpd3l	100	97.638	Cyprinodon_variegatus
ENSPKIG00000006412	snrpd3l	100	96.875	ENSDARG00000076283	snrpd3l	100	96.875	Danio_rerio
ENSPKIG00000006412	snrpd3l	100	95.276	ENSDARG00000013800	snrpd3	100	95.276	Danio_rerio
ENSPKIG00000006412	snrpd3l	100	96.850	ENSDNOG00000047424	-	100	96.850	Dasypus_novemcinctus
ENSPKIG00000006412	snrpd3l	97	74.797	ENSDNOG00000042638	-	100	72.358	Dasypus_novemcinctus
ENSPKIG00000006412	snrpd3l	100	86.923	ENSDNOG00000018004	-	100	84.615	Dasypus_novemcinctus
ENSPKIG00000006412	snrpd3l	100	81.890	ENSDORG00000027706	-	100	79.528	Dipodomys_ordii
ENSPKIG00000006412	snrpd3l	100	71.654	ENSDORG00000027169	-	100	67.717	Dipodomys_ordii
ENSPKIG00000006412	snrpd3l	87	88.288	ENSDORG00000002800	-	100	84.685	Dipodomys_ordii
ENSPKIG00000006412	snrpd3l	83	83.019	FBgn0023167	SmD3	71	82.243	Drosophila_melanogaster
ENSPKIG00000006412	snrpd3l	100	96.850	ENSEASG00005000273	SNRPD3	100	96.850	Equus_asinus_asinus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSECAG00000023316	SNRPD3	100	96.850	Equus_caballus
ENSPKIG00000006412	snrpd3l	100	96.063	ENSEEUG00000015518	SNRPD3	100	96.063	Erinaceus_europaeus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSELUG00000001854	snrpd3	100	96.850	Esox_lucius
ENSPKIG00000006412	snrpd3l	100	98.425	ENSELUG00000010092	snrpd3l	100	98.425	Esox_lucius
ENSPKIG00000006412	snrpd3l	100	96.850	ENSFCAG00000001512	SNRPD3	100	96.850	Felis_catus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSFALG00000007303	SNRPD3	100	96.850	Ficedula_albicollis
ENSPKIG00000006412	snrpd3l	100	96.850	ENSFDAG00000010772	SNRPD3	100	96.850	Fukomys_damarensis
ENSPKIG00000006412	snrpd3l	100	98.425	ENSFHEG00000010754	snrpd3l	100	98.425	Fundulus_heteroclitus
ENSPKIG00000006412	snrpd3l	100	96.875	ENSGMOG00000008469	snrpd3l	100	96.875	Gadus_morhua
ENSPKIG00000006412	snrpd3l	100	96.850	ENSGALG00000006596	SNRPD3	100	96.850	Gallus_gallus
ENSPKIG00000006412	snrpd3l	83	98.113	ENSGAFG00000006661	snrpd3l	82	98.113	Gambusia_affinis
ENSPKIG00000006412	snrpd3l	100	96.875	ENSGACG00000017533	snrpd3l	100	96.875	Gasterosteus_aculeatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSGAGG00000023325	SNRPD3	100	96.850	Gopherus_agassizii
ENSPKIG00000006412	snrpd3l	100	96.850	ENSGGOG00000015640	SNRPD3	100	96.850	Gorilla_gorilla
ENSPKIG00000006412	snrpd3l	100	97.638	ENSHBUG00000001332	snrpd3l	100	97.638	Haplochromis_burtoni
ENSPKIG00000006412	snrpd3l	100	96.850	ENSHGLG00000016496	SNRPD3	100	96.850	Heterocephalus_glaber_female
ENSPKIG00000006412	snrpd3l	99	93.651	ENSHGLG00000009844	-	99	89.683	Heterocephalus_glaber_female
ENSPKIG00000006412	snrpd3l	99	93.651	ENSHGLG00100011326	-	99	89.683	Heterocephalus_glaber_male
ENSPKIG00000006412	snrpd3l	100	96.850	ENSHGLG00100019304	SNRPD3	100	96.850	Heterocephalus_glaber_male
ENSPKIG00000006412	snrpd3l	100	96.850	ENSHCOG00000014396	snrpd3l	100	96.850	Hippocampus_comes
ENSPKIG00000006412	snrpd3l	100	95.312	ENSIPUG00000003083	snrpd3	100	95.312	Ictalurus_punctatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSSTOG00000025674	SNRPD3	100	96.850	Ictidomys_tridecemlineatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSJJAG00000013303	Snrpd3	100	96.850	Jaculus_jaculus
ENSPKIG00000006412	snrpd3l	100	98.425	ENSKMAG00000012493	snrpd3l	100	98.425	Kryptolebias_marmoratus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSLBEG00000003202	snrpd3l	100	97.638	Labrus_bergylta
ENSPKIG00000006412	snrpd3l	100	96.063	ENSLACG00000015192	SNRPD3	100	96.063	Latimeria_chalumnae
ENSPKIG00000006412	snrpd3l	100	97.638	ENSLOCG00000006978	snrpd3	100	97.638	Lepisosteus_oculatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSLAFG00000028180	SNRPD3	100	96.850	Loxodonta_africana
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMFAG00000033628	SNRPD3	100	96.850	Macaca_fascicularis
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMMUG00000000264	SNRPD3	100	96.850	Macaca_mulatta
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMNEG00000020857	SNRPD3	100	96.850	Macaca_nemestrina
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMLEG00000037548	SNRPD3	100	96.850	Mandrillus_leucophaeus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSMZEG00005017664	snrpd3l	100	97.638	Maylandia_zebra
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMAUG00000021393	Snrpd3	100	96.850	Mesocricetus_auratus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMICG00000034782	SNRPD3	100	96.850	Microcebus_murinus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMOCG00000009361	Snrpd3	100	96.850	Microtus_ochrogaster
ENSPKIG00000006412	snrpd3l	83	98.113	ENSMMOG00000020985	snrpd3l	67	98.113	Mola_mola
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMODG00000004024	SNRPD3	100	96.850	Monodelphis_domestica
ENSPKIG00000006412	snrpd3l	100	97.638	ENSMALG00000013334	snrpd3l	100	97.638	Monopterus_albus
ENSPKIG00000006412	snrpd3l	100	96.850	MGP_CAROLIEiJ_G0015441	Snrpd3	100	96.850	Mus_caroli
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMUSG00000020180	Snrpd3	100	96.850	Mus_musculus
ENSPKIG00000006412	snrpd3l	100	96.850	MGP_PahariEiJ_G0030857	Snrpd3	100	96.850	Mus_pahari
ENSPKIG00000006412	snrpd3l	100	96.850	MGP_SPRETEiJ_G0016254	Snrpd3	100	96.850	Mus_spretus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMPUG00000002889	SNRPD3	100	96.850	Mustela_putorius_furo
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMLUG00000009838	SNRPD3	100	96.850	Myotis_lucifugus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSNGAG00000010328	Snrpd3	100	96.850	Nannospalax_galili
ENSPKIG00000006412	snrpd3l	100	97.638	ENSNBRG00000020307	snrpd3l	100	97.638	Neolamprologus_brichardi
ENSPKIG00000006412	snrpd3l	100	96.850	ENSNLEG00000035757	SNRPD3	100	96.850	Nomascus_leucogenys
ENSPKIG00000006412	snrpd3l	100	96.850	ENSMEUG00000003772	SNRPD3	100	96.850	Notamacropus_eugenii
ENSPKIG00000006412	snrpd3l	100	96.850	ENSOPRG00000005763	SNRPD3	100	96.850	Ochotona_princeps
ENSPKIG00000006412	snrpd3l	100	96.063	ENSODEG00000019354	-	100	96.063	Octodon_degus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSODEG00000008064	-	100	96.850	Octodon_degus
ENSPKIG00000006412	snrpd3l	100	93.701	ENSODEG00000020162	-	100	89.764	Octodon_degus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSONIG00000003828	snrpd3l	100	97.638	Oreochromis_niloticus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSOANG00000002463	SNRPD3	100	96.850	Ornithorhynchus_anatinus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSOCUG00000004845	SNRPD3	100	96.850	Oryctolagus_cuniculus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSORLG00000010586	snrpd3l	100	97.638	Oryzias_latipes
ENSPKIG00000006412	snrpd3l	100	97.638	ENSORLG00020011769	snrpd3l	100	97.638	Oryzias_latipes_hni
ENSPKIG00000006412	snrpd3l	100	97.638	ENSORLG00015022940	snrpd3l	100	97.638	Oryzias_latipes_hsok
ENSPKIG00000006412	snrpd3l	100	98.425	ENSOMEG00000022734	snrpd3l	100	98.425	Oryzias_melastigma
ENSPKIG00000006412	snrpd3l	100	96.850	ENSOGAG00000012708	SNRPD3	100	96.850	Otolemur_garnettii
ENSPKIG00000006412	snrpd3l	100	96.850	ENSOARG00000013984	SNRPD3	100	96.850	Ovis_aries
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPPAG00000039191	SNRPD3	100	96.850	Pan_paniscus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPPRG00000001470	SNRPD3	100	96.850	Panthera_pardus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPTIG00000016610	SNRPD3	100	96.850	Panthera_tigris_altaica
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPTRG00000014176	SNRPD3	100	96.850	Pan_troglodytes
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPANG00000009279	SNRPD3	100	96.850	Papio_anubis
ENSPKIG00000006412	snrpd3l	100	95.276	ENSPSIG00000010022	-	100	95.276	Pelodiscus_sinensis
ENSPKIG00000006412	snrpd3l	98	95.968	ENSPMGG00000004486	snrpd3l	100	95.968	Periophthalmus_magnuspinnatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPCIG00000010910	SNRPD3	84	96.850	Phascolarctos_cinereus
ENSPKIG00000006412	snrpd3l	100	98.425	ENSPFOG00000019673	snrpd3l	100	98.425	Poecilia_formosa
ENSPKIG00000006412	snrpd3l	100	98.425	ENSPLAG00000023249	snrpd3l	100	98.425	Poecilia_latipinna
ENSPKIG00000006412	snrpd3l	100	98.425	ENSPMEG00000008482	snrpd3l	100	98.425	Poecilia_mexicana
ENSPKIG00000006412	snrpd3l	97	87.805	ENSPREG00000007532	snrpd3l	98	87.805	Poecilia_reticulata
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPPYG00000011648	SNRPD3	100	96.850	Pongo_abelii
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPCAG00000002065	SNRPD3	100	96.850	Procavia_capensis
ENSPKIG00000006412	snrpd3l	100	96.850	ENSPCOG00000011842	SNRPD3	100	96.850	Propithecus_coquereli
ENSPKIG00000006412	snrpd3l	100	96.063	ENSPVAG00000011405	SNRPD3	100	96.063	Pteropus_vampyrus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSPNYG00000013344	snrpd3l	100	97.638	Pundamilia_nyererei
ENSPKIG00000006412	snrpd3l	100	96.094	ENSPNAG00000008683	snrpd3l	100	96.094	Pygocentrus_nattereri
ENSPKIG00000006412	snrpd3l	100	96.063	ENSPNAG00000010547	snrpd3	100	96.063	Pygocentrus_nattereri
ENSPKIG00000006412	snrpd3l	100	96.850	ENSRNOG00000050410	Snrpd3	100	96.850	Rattus_norvegicus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSRBIG00000029017	SNRPD3	100	96.850	Rhinopithecus_bieti
ENSPKIG00000006412	snrpd3l	100	96.850	ENSRROG00000031152	SNRPD3	100	96.850	Rhinopithecus_roxellana
ENSPKIG00000006412	snrpd3l	75	47.368	YLR147C	SMD3	92	47.368	Saccharomyces_cerevisiae
ENSPKIG00000006412	snrpd3l	100	95.276	ENSSFOG00015014180	snrpd3l	100	95.276	Scleropages_formosus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSSFOG00015007002	snrpd3l	100	96.850	Scleropages_formosus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSSMAG00000019307	snrpd3l	100	97.638	Scophthalmus_maximus
ENSPKIG00000006412	snrpd3l	100	97.638	ENSSDUG00000006870	snrpd3l	100	97.638	Seriola_dumerili
ENSPKIG00000006412	snrpd3l	100	97.638	ENSSLDG00000022664	snrpd3l	100	97.638	Seriola_lalandi_dorsalis
ENSPKIG00000006412	snrpd3l	100	96.850	ENSSARG00000002357	SNRPD3	100	96.850	Sorex_araneus
ENSPKIG00000006412	snrpd3l	100	96.063	ENSSPUG00000014285	SNRPD3	100	96.063	Sphenodon_punctatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSSSCG00000010058	SNRPD3	100	96.850	Sus_scrofa
ENSPKIG00000006412	snrpd3l	100	96.850	ENSTGUG00000010079	SNRPD3	100	96.850	Taeniopygia_guttata
ENSPKIG00000006412	snrpd3l	83	98.113	ENSTRUG00000023976	snrpd3l	90	98.113	Takifugu_rubripes
ENSPKIG00000006412	snrpd3l	100	98.425	ENSTNIG00000005323	snrpd3l	100	98.425	Tetraodon_nigroviridis
ENSPKIG00000006412	snrpd3l	100	96.850	ENSTBEG00000014334	SNRPD3	100	96.850	Tupaia_belangeri
ENSPKIG00000006412	snrpd3l	100	96.850	ENSTTRG00000006022	SNRPD3	100	96.850	Tursiops_truncatus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSUAMG00000010767	SNRPD3	100	96.850	Ursus_americanus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSUMAG00000001670	SNRPD3	100	96.850	Ursus_maritimus
ENSPKIG00000006412	snrpd3l	100	96.850	ENSVPAG00000000241	SNRPD3	100	96.850	Vicugna_pacos
ENSPKIG00000006412	snrpd3l	83	98.113	ENSVVUG00000019340	SNRPD3	53	98.113	Vulpes_vulpes
ENSPKIG00000006412	snrpd3l	100	80.620	ENSXETG00000024918	snrpd3	100	76.744	Xenopus_tropicalis
ENSPKIG00000006412	snrpd3l	100	98.425	ENSXCOG00000004795	snrpd3l	100	98.425	Xiphophorus_couchianus
ENSPKIG00000006412	snrpd3l	100	98.425	ENSXMAG00000001133	snrpd3l	100	98.425	Xiphophorus_maculatus