EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006442 (Gene tree)
Gene ID: 111858960
Gene Symbol: riok1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6703 bases
Position: chrPGUA01000366.1:421014-427716
Accession: 111858960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022440	RIO1	PF01163.22	1.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003104	-	1650	-	ENSPKIP00000022440	549 (aa)	XP_023696974	UPI000CD6374C

Gene Model

Click here to download ENSPKIG00000006442's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006442	riok1	55	43.366	ENSPKIG00000018297	riok3	59	43.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006442	riok1	100	68.206	ENSG00000124784	RIOK1	99	67.951	Homo_sapiens
ENSPKIG00000006442	riok1	57	70.662	ENSAPOG00000015632	riok1	99	70.978	Acanthochromis_polyacanthus
ENSPKIG00000006442	riok1	100	69.681	ENSAMEG00000017367	RIOK1	99	68.794	Ailuropoda_melanoleuca
ENSPKIG00000006442	riok1	89	76.065	ENSACIG00000003735	riok1	88	76.386	Amphilophus_citrinellus
ENSPKIG00000006442	riok1	100	71.043	ENSAOCG00000011818	riok1	100	69.910	Amphiprion_ocellaris
ENSPKIG00000006442	riok1	100	71.171	ENSAPEG00000001345	riok1	100	70.090	Amphiprion_percula
ENSPKIG00000006442	riok1	83	76.096	ENSATEG00000006594	riok1	99	75.877	Anabas_testudineus
ENSPKIG00000006442	riok1	85	76.744	ENSAPLG00000004196	RIOK1	100	76.744	Anas_platyrhynchos
ENSPKIG00000006442	riok1	100	70.796	ENSACAG00000000695	RIOK1	99	68.421	Anolis_carolinensis
ENSPKIG00000006442	riok1	100	60.142	ENSANAG00000023777	RIOK1	99	59.649	Aotus_nancymaae
ENSPKIG00000006442	riok1	99	72.924	ENSACLG00000015799	riok1	99	71.300	Astatotilapia_calliptera
ENSPKIG00000006442	riok1	100	71.354	ENSAMXG00000015286	riok1	99	71.007	Astyanax_mexicanus
ENSPKIG00000006442	riok1	88	74.134	ENSBTAG00000013821	RIOK1	99	67.776	Bos_taurus
ENSPKIG00000006442	riok1	79	47.085	WBGene00019698	riok-1	85	47.085	Caenorhabditis_elegans
ENSPKIG00000006442	riok1	100	69.039	ENSCJAG00000042960	RIOK1	99	68.070	Callithrix_jacchus
ENSPKIG00000006442	riok1	88	74.096	ENSCAFG00000009563	RIOK1	99	69.149	Canis_familiaris
ENSPKIG00000006442	riok1	79	76.136	ENSCAFG00020013233	RIOK1	94	68.097	Canis_lupus_dingo
ENSPKIG00000006442	riok1	100	68.496	ENSCHIG00000001534	RIOK1	99	67.888	Capra_hircus
ENSPKIG00000006442	riok1	67	72.149	ENSTSYG00000011368	RIOK1	100	71.045	Carlito_syrichta
ENSPKIG00000006442	riok1	80	74.000	ENSCAPG00000008489	RIOK1	100	73.491	Cavia_aperea
ENSPKIG00000006442	riok1	97	67.684	ENSCPOG00000009882	RIOK1	99	68.126	Cavia_porcellus
ENSPKIG00000006442	riok1	100	67.845	ENSCCAG00000024061	RIOK1	99	67.719	Cebus_capucinus
ENSPKIG00000006442	riok1	100	69.258	ENSCATG00000001548	RIOK1	99	68.772	Cercocebus_atys
ENSPKIG00000006442	riok1	100	68.142	ENSCLAG00000003522	RIOK1	99	68.617	Chinchilla_lanigera
ENSPKIG00000006442	riok1	91	69.488	ENSCSAG00000007396	RIOK1	88	71.967	Chlorocebus_sabaeus
ENSPKIG00000006442	riok1	64	83.590	ENSCHOG00000001873	RIOK1	84	60.000	Choloepus_hoffmanni
ENSPKIG00000006442	riok1	74	80.387	ENSCPBG00000008685	RIOK1	75	78.182	Chrysemys_picta_bellii
ENSPKIG00000006442	riok1	100	69.081	ENSCANG00000032919	RIOK1	99	68.772	Colobus_angolensis_palliatus
ENSPKIG00000006442	riok1	91	70.703	ENSCGRG00001018868	Riok1	87	70.717	Cricetulus_griseus_chok1gshd
ENSPKIG00000006442	riok1	91	70.703	ENSCGRG00000008015	Riok1	87	70.717	Cricetulus_griseus_crigri
ENSPKIG00000006442	riok1	89	53.213	ENSCSEG00000015014	riok1	87	52.535	Cynoglossus_semilaevis
ENSPKIG00000006442	riok1	58	66.566	ENSCVAG00000011291	riok1	99	67.492	Cyprinodon_variegatus
ENSPKIG00000006442	riok1	100	72.872	ENSDARG00000016399	riok1	100	72.549	Danio_rerio
ENSPKIG00000006442	riok1	100	67.951	ENSDNOG00000015813	RIOK1	99	66.900	Dasypus_novemcinctus
ENSPKIG00000006442	riok1	88	74.696	ENSDORG00000008530	Riok1	99	68.366	Dipodomys_ordii
ENSPKIG00000006442	riok1	83	55.720	FBgn0036187	RIOK1	82	53.673	Drosophila_melanogaster
ENSPKIG00000006442	riok1	88	73.279	ENSETEG00000020273	RIOK1	99	67.901	Echinops_telfairi
ENSPKIG00000006442	riok1	99	60.901	ENSEBUG00000013672	riok1	86	66.324	Eptatretus_burgeri
ENSPKIG00000006442	riok1	90	69.781	ENSEASG00005012032	RIOK1	84	71.608	Equus_asinus_asinus
ENSPKIG00000006442	riok1	100	68.254	ENSECAG00000009007	RIOK1	99	67.549	Equus_caballus
ENSPKIG00000006442	riok1	74	66.346	ENSEEUG00000007123	RIOK1	89	68.367	Erinaceus_europaeus
ENSPKIG00000006442	riok1	100	74.638	ENSELUG00000017029	riok1	99	74.819	Esox_lucius
ENSPKIG00000006442	riok1	86	75.417	ENSFCAG00000027290	RIOK1	84	74.385	Felis_catus
ENSPKIG00000006442	riok1	100	69.558	ENSFALG00000013244	RIOK1	99	69.366	Ficedula_albicollis
ENSPKIG00000006442	riok1	100	67.788	ENSFDAG00000019139	RIOK1	99	68.085	Fukomys_damarensis
ENSPKIG00000006442	riok1	81	73.111	ENSFHEG00000021419	riok1	98	73.111	Fundulus_heteroclitus
ENSPKIG00000006442	riok1	74	77.262	ENSGMOG00000018668	riok1	94	77.861	Gadus_morhua
ENSPKIG00000006442	riok1	58	70.462	ENSGALG00000012795	RIOK1	100	70.462	Gallus_gallus
ENSPKIG00000006442	riok1	85	64.026	ENSGAFG00000004091	riok1	79	64.407	Gambusia_affinis
ENSPKIG00000006442	riok1	87	77.244	ENSGACG00000002496	riok1	94	77.366	Gasterosteus_aculeatus
ENSPKIG00000006442	riok1	74	80.392	ENSGAGG00000002262	RIOK1	87	80.392	Gopherus_agassizii
ENSPKIG00000006442	riok1	100	58.770	ENSGGOG00000011037	RIOK1	99	61.023	Gorilla_gorilla
ENSPKIG00000006442	riok1	100	68.093	ENSHGLG00000008699	RIOK1	99	67.679	Heterocephalus_glaber_female
ENSPKIG00000006442	riok1	100	68.271	ENSHGLG00100008188	RIOK1	99	67.857	Heterocephalus_glaber_male
ENSPKIG00000006442	riok1	89	72.414	ENSHCOG00000013275	riok1	90	73.045	Hippocampus_comes
ENSPKIG00000006442	riok1	100	73.582	ENSIPUG00000003290	riok1	100	73.890	Ictalurus_punctatus
ENSPKIG00000006442	riok1	100	68.078	ENSSTOG00000009289	RIOK1	99	67.358	Ictidomys_tridecemlineatus
ENSPKIG00000006442	riok1	100	69.204	ENSJJAG00000015152	Riok1	99	68.440	Jaculus_jaculus
ENSPKIG00000006442	riok1	70	77.892	ENSKMAG00000019378	riok1	100	77.892	Kryptolebias_marmoratus
ENSPKIG00000006442	riok1	89	76.518	ENSLBEG00000016650	riok1	86	77.618	Labrus_bergylta
ENSPKIG00000006442	riok1	100	63.009	ENSLACG00000000300	RIOK1	99	61.150	Latimeria_chalumnae
ENSPKIG00000006442	riok1	100	76.122	ENSLOCG00000011728	riok1	99	76.302	Lepisosteus_oculatus
ENSPKIG00000006442	riok1	100	68.254	ENSLAFG00000005504	RIOK1	99	67.080	Loxodonta_africana
ENSPKIG00000006442	riok1	100	69.435	ENSMFAG00000029990	RIOK1	99	68.947	Macaca_fascicularis
ENSPKIG00000006442	riok1	100	69.258	ENSMMUG00000015577	RIOK1	99	68.772	Macaca_mulatta
ENSPKIG00000006442	riok1	100	66.784	ENSMNEG00000034396	RIOK1	97	72.052	Macaca_nemestrina
ENSPKIG00000006442	riok1	100	69.081	ENSMLEG00000026327	RIOK1	99	68.596	Mandrillus_leucophaeus
ENSPKIG00000006442	riok1	99	71.532	ENSMAMG00000019557	riok1	88	77.984	Mastacembelus_armatus
ENSPKIG00000006442	riok1	99	73.285	ENSMZEG00005019482	riok1	99	71.841	Maylandia_zebra
ENSPKIG00000006442	riok1	100	70.945	ENSMGAG00000003816	RIOK1	99	70.442	Meleagris_gallopavo
ENSPKIG00000006442	riok1	90	71.344	ENSMAUG00000012751	Riok1	99	66.667	Mesocricetus_auratus
ENSPKIG00000006442	riok1	100	68.607	ENSMICG00000044301	RIOK1	83	69.272	Microcebus_murinus
ENSPKIG00000006442	riok1	100	66.489	ENSMOCG00000017032	Riok1	87	71.805	Microtus_ochrogaster
ENSPKIG00000006442	riok1	85	67.470	ENSMMOG00000020598	riok1	87	67.871	Mola_mola
ENSPKIG00000006442	riok1	88	75.152	ENSMODG00000009964	RIOK1	99	69.002	Monodelphis_domestica
ENSPKIG00000006442	riok1	89	67.748	ENSMALG00000019982	riok1	91	69.167	Monopterus_albus
ENSPKIG00000006442	riok1	100	66.845	MGP_CAROLIEiJ_G0018439	Riok1	99	66.432	Mus_caroli
ENSPKIG00000006442	riok1	100	66.488	ENSMUSG00000021428	Riok1	99	65.729	Mus_musculus
ENSPKIG00000006442	riok1	100	65.785	MGP_PahariEiJ_G0019507	Riok1	87	71.315	Mus_pahari
ENSPKIG00000006442	riok1	100	66.667	MGP_SPRETEiJ_G0019319	Riok1	99	65.905	Mus_spretus
ENSPKIG00000006442	riok1	86	75.833	ENSMPUG00000000570	RIOK1	99	68.319	Mustela_putorius_furo
ENSPKIG00000006442	riok1	100	68.662	ENSMLUG00000015312	RIOK1	99	67.308	Myotis_lucifugus
ENSPKIG00000006442	riok1	100	68.694	ENSNGAG00000021734	Riok1	99	67.250	Nannospalax_galili
ENSPKIG00000006442	riok1	72	84.848	ENSNBRG00000017489	riok1	75	84.910	Neolamprologus_brichardi
ENSPKIG00000006442	riok1	100	62.210	ENSNLEG00000011621	RIOK1	99	61.319	Nomascus_leucogenys
ENSPKIG00000006442	riok1	74	59.547	ENSMEUG00000006679	-	73	59.547	Notamacropus_eugenii
ENSPKIG00000006442	riok1	67	71.968	ENSOPRG00000009524	RIOK1	100	71.968	Ochotona_princeps
ENSPKIG00000006442	riok1	56	68.387	ENSODEG00000005663	RIOK1	98	60.253	Octodon_degus
ENSPKIG00000006442	riok1	99	73.370	ENSONIG00000014010	riok1	98	72.826	Oreochromis_niloticus
ENSPKIG00000006442	riok1	83	77.778	ENSOANG00000012553	RIOK1	100	78.233	Ornithorhynchus_anatinus
ENSPKIG00000006442	riok1	100	66.783	ENSOCUG00000011824	RIOK1	85	74.636	Oryctolagus_cuniculus
ENSPKIG00000006442	riok1	99	72.313	ENSORLG00000008221	riok1	99	69.636	Oryzias_latipes
ENSPKIG00000006442	riok1	99	69.429	ENSORLG00020013838	riok1	61	75.159	Oryzias_latipes_hni
ENSPKIG00000006442	riok1	99	71.429	ENSORLG00015009817	riok1	86	76.891	Oryzias_latipes_hsok
ENSPKIG00000006442	riok1	99	70.985	ENSOMEG00000002758	riok1	89	69.399	Oryzias_melastigma
ENSPKIG00000006442	riok1	100	65.357	ENSOGAG00000010192	RIOK1	99	64.821	Otolemur_garnettii
ENSPKIG00000006442	riok1	100	68.917	ENSOARG00000017747	RIOK1	99	68.063	Ovis_aries
ENSPKIG00000006442	riok1	100	60.071	ENSPPAG00000016349	RIOK1	100	68.807	Pan_paniscus
ENSPKIG00000006442	riok1	86	75.208	ENSPPRG00000001932	RIOK1	99	67.073	Panthera_pardus
ENSPKIG00000006442	riok1	86	75.208	ENSPTIG00000018545	RIOK1	99	67.073	Panthera_tigris_altaica
ENSPKIG00000006442	riok1	100	68.028	ENSPTRG00000017700	RIOK1	99	68.301	Pan_troglodytes
ENSPKIG00000006442	riok1	100	69.258	ENSPANG00000016522	RIOK1	99	68.772	Papio_anubis
ENSPKIG00000006442	riok1	100	71.864	ENSPSIG00000006488	RIOK1	97	71.864	Pelodiscus_sinensis
ENSPKIG00000006442	riok1	75	73.301	ENSPMGG00000017807	riok1	96	71.348	Periophthalmus_magnuspinnatus
ENSPKIG00000006442	riok1	88	72.892	ENSPEMG00000017844	Riok1	87	72.892	Peromyscus_maniculatus_bairdii
ENSPKIG00000006442	riok1	61	76.261	ENSPMAG00000006351	riok1	80	76.261	Petromyzon_marinus
ENSPKIG00000006442	riok1	76	78.251	ENSPCIG00000012653	RIOK1	90	70.392	Phascolarctos_cinereus
ENSPKIG00000006442	riok1	99	67.459	ENSPFOG00000011532	riok1	99	66.728	Poecilia_formosa
ENSPKIG00000006442	riok1	99	67.459	ENSPLAG00000001341	riok1	99	66.728	Poecilia_latipinna
ENSPKIG00000006442	riok1	99	67.276	ENSPMEG00000007710	riok1	99	66.545	Poecilia_mexicana
ENSPKIG00000006442	riok1	99	66.969	ENSPREG00000009237	riok1	99	66.362	Poecilia_reticulata
ENSPKIG00000006442	riok1	100	68.440	ENSPPYG00000016207	RIOK1	99	67.770	Pongo_abelii
ENSPKIG00000006442	riok1	100	59.928	ENSPCAG00000007892	RIOK1	99	59.034	Procavia_capensis
ENSPKIG00000006442	riok1	100	68.551	ENSPVAG00000014091	RIOK1	99	67.539	Pteropus_vampyrus
ENSPKIG00000006442	riok1	58	75.625	ENSPNYG00000004465	riok1	100	74.375	Pundamilia_nyererei
ENSPKIG00000006442	riok1	100	74.472	ENSPNAG00000015435	riok1	99	74.868	Pygocentrus_nattereri
ENSPKIG00000006442	riok1	91	70.254	ENSRNOG00000014049	Riok1	100	73.491	Rattus_norvegicus
ENSPKIG00000006442	riok1	100	69.611	ENSRBIG00000036685	RIOK1	99	68.596	Rhinopithecus_bieti
ENSPKIG00000006442	riok1	100	69.788	ENSRROG00000036611	RIOK1	99	68.772	Rhinopithecus_roxellana
ENSPKIG00000006442	riok1	61	39.612	YOR119C	RIO1	96	35.246	Saccharomyces_cerevisiae
ENSPKIG00000006442	riok1	100	69.982	ENSSBOG00000012588	RIOK1	99	69.002	Saimiri_boliviensis_boliviensis
ENSPKIG00000006442	riok1	71	80.856	ENSSHAG00000003091	RIOK1	92	70.165	Sarcophilus_harrisii
ENSPKIG00000006442	riok1	99	80.866	ENSSFOG00015001035	riok1	99	81.408	Scleropages_formosus
ENSPKIG00000006442	riok1	58	70.154	ENSSDUG00000007291	riok1	100	70.000	Seriola_dumerili
ENSPKIG00000006442	riok1	100	72.093	ENSSLDG00000017657	riok1	99	71.556	Seriola_lalandi_dorsalis
ENSPKIG00000006442	riok1	86	65.684	ENSSPUG00000007624	RIOK1	82	65.409	Sphenodon_punctatus
ENSPKIG00000006442	riok1	100	71.196	ENSSPAG00000022710	riok1	100	69.565	Stegastes_partitus
ENSPKIG00000006442	riok1	100	68.683	ENSSSCG00000001024	RIOK1	99	68.505	Sus_scrofa
ENSPKIG00000006442	riok1	88	75.051	ENSTGUG00000002331	RIOK1	99	69.805	Taeniopygia_guttata
ENSPKIG00000006442	riok1	80	61.712	ENSTRUG00000002854	riok1	93	67.021	Takifugu_rubripes
ENSPKIG00000006442	riok1	52	65.734	ENSTRUG00000001575	-	98	66.197	Takifugu_rubripes
ENSPKIG00000006442	riok1	99	63.063	ENSTNIG00000003078	riok1	98	62.816	Tetraodon_nigroviridis
ENSPKIG00000006442	riok1	100	65.897	ENSTBEG00000016730	RIOK1	99	64.921	Tupaia_belangeri
ENSPKIG00000006442	riok1	70	79.381	ENSTTRG00000017335	RIOK1	81	79.381	Tursiops_truncatus
ENSPKIG00000006442	riok1	91	70.588	ENSUAMG00000003721	RIOK1	86	72.500	Ursus_americanus
ENSPKIG00000006442	riok1	100	69.858	ENSUMAG00000018461	RIOK1	99	69.149	Ursus_maritimus
ENSPKIG00000006442	riok1	62	77.917	ENSVPAG00000010813	-	63	78.723	Vicugna_pacos
ENSPKIG00000006442	riok1	88	74.699	ENSVVUG00000005018	RIOK1	99	69.326	Vulpes_vulpes
ENSPKIG00000006442	riok1	89	70.683	ENSXETG00000020436	riok1	86	72.165	Xenopus_tropicalis
ENSPKIG00000006442	riok1	85	68.162	ENSXCOG00000000245	riok1	100	68.590	Xiphophorus_couchianus
ENSPKIG00000006442	riok1	85	68.577	ENSXMAG00000014572	riok1	89	68.443	Xiphophorus_maculatus