EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000006483 (Gene tree)
Gene ID: 111848261
Gene Symbol: tdp2b
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6624 bases
Position: chrPGUA01000180.1:462949-469572
Accession: 111848261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022506	Exo_endo_phos	PF03372.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003172	-	4919	-	ENSPKIP00000022506	368 (aa)	XP_023675880	UPI000CD62F04

Gene Model

Click here to download ENSPKIG00000006483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006483	tdp2b	94	51.989	ENSG00000111802	TDP2	92	53.659	Homo_sapiens
ENSPKIG00000006483	tdp2b	68	62.205	ENSAPOG00000018379	-	89	62.205	Acanthochromis_polyacanthus
ENSPKIG00000006483	tdp2b	75	55.396	ENSAMEG00000010230	TDP2	98	55.396	Ailuropoda_melanoleuca
ENSPKIG00000006483	tdp2b	68	60.474	ENSAPEG00000004208	-	90	60.474	Amphiprion_percula
ENSPKIG00000006483	tdp2b	74	57.609	ENSATEG00000010663	-	89	57.609	Anabas_testudineus
ENSPKIG00000006483	tdp2b	93	54.046	ENSACAG00000002332	TDP2	94	53.482	Anolis_carolinensis
ENSPKIG00000006483	tdp2b	94	53.582	ENSANAG00000020033	TDP2	93	53.276	Aotus_nancymaae
ENSPKIG00000006483	tdp2b	76	62.500	ENSACLG00000016174	tdp2b	94	62.500	Astatotilapia_calliptera
ENSPKIG00000006483	tdp2b	76	63.571	ENSACLG00000016132	tdp2b	94	63.571	Astatotilapia_calliptera
ENSPKIG00000006483	tdp2b	73	65.441	ENSACLG00000016148	tdp2b	95	65.441	Astatotilapia_calliptera
ENSPKIG00000006483	tdp2b	67	55.422	ENSAMXG00000036549	tdp2a	81	55.422	Astyanax_mexicanus
ENSPKIG00000006483	tdp2b	95	65.054	ENSAMXG00000011775	tdp2b	97	65.054	Astyanax_mexicanus
ENSPKIG00000006483	tdp2b	94	54.179	ENSBTAG00000000365	TDP2	99	52.561	Bos_taurus
ENSPKIG00000006483	tdp2b	94	53.693	ENSCJAG00000021963	-	92	53.693	Callithrix_jacchus
ENSPKIG00000006483	tdp2b	94	54.728	ENSCJAG00000006074	TDP2	91	56.890	Callithrix_jacchus
ENSPKIG00000006483	tdp2b	94	52.841	ENSCAFG00000010428	TDP2	94	57.040	Canis_familiaris
ENSPKIG00000006483	tdp2b	75	57.040	ENSCAFG00020009994	TDP2	94	57.040	Canis_lupus_dingo
ENSPKIG00000006483	tdp2b	79	54.483	ENSCHIG00000015294	-	95	55.357	Capra_hircus
ENSPKIG00000006483	tdp2b	86	50.473	ENSTSYG00000037199	TDP2	99	51.724	Carlito_syrichta
ENSPKIG00000006483	tdp2b	94	54.046	ENSCPOG00000006390	TDP2	93	54.046	Cavia_porcellus
ENSPKIG00000006483	tdp2b	95	54.416	ENSCCAG00000022734	TDP2	91	56.429	Cebus_capucinus
ENSPKIG00000006483	tdp2b	94	53.009	ENSCATG00000022076	TDP2	90	55.755	Cercocebus_atys
ENSPKIG00000006483	tdp2b	99	52.732	ENSCLAG00000002072	TDP2	97	52.732	Chinchilla_lanigera
ENSPKIG00000006483	tdp2b	95	52.707	ENSCSAG00000007769	TDP2	94	52.707	Chlorocebus_sabaeus
ENSPKIG00000006483	tdp2b	95	54.701	ENSCPBG00000006551	TDP2	85	55.043	Chrysemys_picta_bellii
ENSPKIG00000006483	tdp2b	94	52.722	ENSCANG00000040122	TDP2	92	54.577	Colobus_angolensis_palliatus
ENSPKIG00000006483	tdp2b	95	48.580	ENSCGRG00001000384	Tdp2	91	48.718	Cricetulus_griseus_chok1gshd
ENSPKIG00000006483	tdp2b	95	46.591	ENSCGRG00000010250	Tdp2	93	47.727	Cricetulus_griseus_crigri
ENSPKIG00000006483	tdp2b	97	65.374	ENSCVAG00000003114	tdp2b	97	66.116	Cyprinodon_variegatus
ENSPKIG00000006483	tdp2b	71	52.874	ENSDARG00000069941	tdp2a	58	52.874	Danio_rerio
ENSPKIG00000006483	tdp2b	96	64.151	ENSDARG00000035954	tdp2b	96	64.151	Danio_rerio
ENSPKIG00000006483	tdp2b	95	52.874	ENSDNOG00000044082	TDP2	92	52.874	Dasypus_novemcinctus
ENSPKIG00000006483	tdp2b	75	56.727	ENSETEG00000019096	TDP2	99	56.727	Echinops_telfairi
ENSPKIG00000006483	tdp2b	69	47.287	ENSEBUG00000006535	tdp2a	60	47.287	Eptatretus_burgeri
ENSPKIG00000006483	tdp2b	94	54.310	ENSEASG00005007656	TDP2	99	52.688	Equus_asinus_asinus
ENSPKIG00000006483	tdp2b	94	54.310	ENSECAG00000014264	TDP2	99	52.688	Equus_caballus
ENSPKIG00000006483	tdp2b	94	54.493	ENSEEUG00000010776	TDP2	99	52.688	Erinaceus_europaeus
ENSPKIG00000006483	tdp2b	74	51.103	ENSELUG00000009321	tdp2a	84	51.103	Esox_lucius
ENSPKIG00000006483	tdp2b	96	67.655	ENSELUG00000016449	tdp2b	98	67.655	Esox_lucius
ENSPKIG00000006483	tdp2b	94	54.598	ENSFCAG00000025612	TDP2	92	54.598	Felis_catus
ENSPKIG00000006483	tdp2b	94	50.867	ENSFALG00000004710	TDP2	93	50.867	Ficedula_albicollis
ENSPKIG00000006483	tdp2b	75	56.475	ENSFDAG00000006512	TDP2	94	56.475	Fukomys_damarensis
ENSPKIG00000006483	tdp2b	78	52.577	ENSFHEG00000013560	-	93	52.577	Fundulus_heteroclitus
ENSPKIG00000006483	tdp2b	95	52.571	ENSGALG00000013637	TDP2	91	52.571	Gallus_gallus
ENSPKIG00000006483	tdp2b	98	54.696	ENSGAGG00000002853	TDP2	88	54.696	Gopherus_agassizii
ENSPKIG00000006483	tdp2b	94	51.989	ENSGGOG00000014237	TDP2	92	53.659	Gorilla_gorilla
ENSPKIG00000006483	tdp2b	58	65.116	ENSHBUG00000005421	-	96	59.671	Haplochromis_burtoni
ENSPKIG00000006483	tdp2b	96	67.409	ENSHBUG00000002714	tdp2b	96	67.409	Haplochromis_burtoni
ENSPKIG00000006483	tdp2b	94	54.624	ENSHGLG00000008655	TDP2	93	54.624	Heterocephalus_glaber_female
ENSPKIG00000006483	tdp2b	94	54.624	ENSHGLG00100019087	TDP2	93	54.624	Heterocephalus_glaber_male
ENSPKIG00000006483	tdp2b	97	65.229	ENSIPUG00000013691	tdp2b	98	65.229	Ictalurus_punctatus
ENSPKIG00000006483	tdp2b	97	49.157	ENSJJAG00000021685	Tdp2	98	49.157	Jaculus_jaculus
ENSPKIG00000006483	tdp2b	71	55.094	ENSKMAG00000015485	-	84	55.094	Kryptolebias_marmoratus
ENSPKIG00000006483	tdp2b	96	54.318	ENSLACG00000008852	TDP2	95	54.318	Latimeria_chalumnae
ENSPKIG00000006483	tdp2b	77	65.603	ENSLOCG00000005817	tdp2b	100	65.603	Lepisosteus_oculatus
ENSPKIG00000006483	tdp2b	95	55.114	ENSLAFG00000002567	TDP2	95	55.114	Loxodonta_africana
ENSPKIG00000006483	tdp2b	94	53.009	ENSMFAG00000045296	TDP2	92	54.930	Macaca_fascicularis
ENSPKIG00000006483	tdp2b	94	53.009	ENSMMUG00000009803	TDP2	93	53.009	Macaca_mulatta
ENSPKIG00000006483	tdp2b	94	53.009	ENSMNEG00000038003	TDP2	92	54.930	Macaca_nemestrina
ENSPKIG00000006483	tdp2b	95	52.422	ENSMLEG00000028883	TDP2	92	54.930	Mandrillus_leucophaeus
ENSPKIG00000006483	tdp2b	98	65.753	ENSMAMG00000013654	tdp2b	98	65.753	Mastacembelus_armatus
ENSPKIG00000006483	tdp2b	66	59.671	ENSMZEG00005003980	-	79	59.671	Maylandia_zebra
ENSPKIG00000006483	tdp2b	73	61.338	ENSMZEG00005004103	tdp2b	90	61.338	Maylandia_zebra
ENSPKIG00000006483	tdp2b	74	62.681	ENSMZEG00005004153	tdp2b	97	62.681	Maylandia_zebra
ENSPKIG00000006483	tdp2b	68	65.339	ENSMZEG00005004055	tdp2b	83	65.339	Maylandia_zebra
ENSPKIG00000006483	tdp2b	76	62.857	ENSMZEG00005004126	tdp2b	94	62.857	Maylandia_zebra
ENSPKIG00000006483	tdp2b	70	67.442	ENSMZEG00005004077	tdp2b	87	67.442	Maylandia_zebra
ENSPKIG00000006483	tdp2b	96	66.295	ENSMZEG00005003950	tdp2b	96	66.295	Maylandia_zebra
ENSPKIG00000006483	tdp2b	95	53.143	ENSMGAG00000008014	TDP2	91	53.143	Meleagris_gallopavo
ENSPKIG00000006483	tdp2b	95	49.432	ENSMAUG00000014451	Tdp2	91	49.573	Mesocricetus_auratus
ENSPKIG00000006483	tdp2b	94	53.468	ENSMICG00000000039	TDP2	94	55.674	Microcebus_murinus
ENSPKIG00000006483	tdp2b	95	50.000	ENSMOCG00000002823	Tdp2	91	50.000	Microtus_ochrogaster
ENSPKIG00000006483	tdp2b	87	55.000	ENSMODG00000011653	TDP2	96	55.625	Monodelphis_domestica
ENSPKIG00000006483	tdp2b	77	55.789	ENSMALG00000005368	-	96	55.789	Monopterus_albus
ENSPKIG00000006483	tdp2b	95	51.136	MGP_CAROLIEiJ_G0018354	Tdp2	93	50.278	Mus_caroli
ENSPKIG00000006483	tdp2b	95	50.423	ENSMUSG00000035958	Tdp2	93	49.587	Mus_musculus
ENSPKIG00000006483	tdp2b	95	49.429	MGP_PahariEiJ_G0019417	Tdp2	93	48.603	Mus_pahari
ENSPKIG00000006483	tdp2b	96	49.587	MGP_SPRETEiJ_G0019220	Tdp2	92	49.587	Mus_spretus
ENSPKIG00000006483	tdp2b	94	53.757	ENSMPUG00000004516	TDP2	99	51.913	Mustela_putorius_furo
ENSPKIG00000006483	tdp2b	93	51.149	ENSMLUG00000013506	TDP2	92	51.884	Myotis_lucifugus
ENSPKIG00000006483	tdp2b	93	48.703	ENSNGAG00000001375	Tdp2	89	48.703	Nannospalax_galili
ENSPKIG00000006483	tdp2b	94	51.989	ENSNLEG00000002447	TDP2	94	51.989	Nomascus_leucogenys
ENSPKIG00000006483	tdp2b	97	53.022	ENSOPRG00000016299	TDP2	98	53.022	Ochotona_princeps
ENSPKIG00000006483	tdp2b	76	56.184	ENSODEG00000014018	TDP2	95	56.184	Octodon_degus
ENSPKIG00000006483	tdp2b	96	52.113	ENSOCUG00000013773	TDP2	95	52.113	Oryctolagus_cuniculus
ENSPKIG00000006483	tdp2b	72	55.390	ENSORLG00000001661	-	98	55.390	Oryzias_latipes
ENSPKIG00000006483	tdp2b	75	53.873	ENSORLG00020004634	-	98	55.390	Oryzias_latipes_hni
ENSPKIG00000006483	tdp2b	70	48.855	ENSORLG00015008190	-	95	48.855	Oryzias_latipes_hsok
ENSPKIG00000006483	tdp2b	70	55.385	ENSOMEG00000015899	-	92	57.028	Oryzias_melastigma
ENSPKIG00000006483	tdp2b	95	54.286	ENSOGAG00000025303	TDP2	92	54.286	Otolemur_garnettii
ENSPKIG00000006483	tdp2b	94	51.989	ENSPPAG00000029023	TDP2	93	53.659	Pan_paniscus
ENSPKIG00000006483	tdp2b	94	54.310	ENSPPRG00000015398	TDP2	92	54.310	Panthera_pardus
ENSPKIG00000006483	tdp2b	75	55.596	ENSPTIG00000018574	TDP2	94	55.596	Panthera_tigris_altaica
ENSPKIG00000006483	tdp2b	94	51.989	ENSPTRG00000017778	TDP2	92	53.659	Pan_troglodytes
ENSPKIG00000006483	tdp2b	95	52.299	ENSPANG00000017590	TDP2	94	52.707	Papio_anubis
ENSPKIG00000006483	tdp2b	75	57.818	ENSPSIG00000004948	TDP2	94	57.818	Pelodiscus_sinensis
ENSPKIG00000006483	tdp2b	95	50.568	ENSPEMG00000001788	Tdp2	90	50.712	Peromyscus_maniculatus_bairdii
ENSPKIG00000006483	tdp2b	68	43.446	ENSPMAG00000001570	tdp2b	97	44.195	Petromyzon_marinus
ENSPKIG00000006483	tdp2b	94	55.780	ENSPCIG00000007316	TDP2	90	54.902	Phascolarctos_cinereus
ENSPKIG00000006483	tdp2b	68	53.968	ENSPFOG00000017990	-	99	49.825	Poecilia_formosa
ENSPKIG00000006483	tdp2b	74	51.825	ENSPLAG00000019439	-	84	51.825	Poecilia_latipinna
ENSPKIG00000006483	tdp2b	76	50.534	ENSPMEG00000010824	-	92	50.534	Poecilia_mexicana
ENSPKIG00000006483	tdp2b	94	51.705	ENSPPYG00000016282	TDP2	85	51.705	Pongo_abelii
ENSPKIG00000006483	tdp2b	94	53.582	ENSPCOG00000021415	TDP2	96	55.396	Propithecus_coquereli
ENSPKIG00000006483	tdp2b	96	66.017	ENSPNYG00000011532	tdp2b	96	66.017	Pundamilia_nyererei
ENSPKIG00000006483	tdp2b	74	60.274	ENSPNYG00000011504	tdp2b	95	60.274	Pundamilia_nyererei
ENSPKIG00000006483	tdp2b	72	55.682	ENSPNAG00000022162	tdp2a	66	55.682	Pygocentrus_nattereri
ENSPKIG00000006483	tdp2b	93	50.585	ENSRNOG00000018246	Tdp2	89	50.733	Rattus_norvegicus
ENSPKIG00000006483	tdp2b	94	52.722	ENSRBIG00000037119	TDP2	92	54.577	Rhinopithecus_bieti
ENSPKIG00000006483	tdp2b	94	52.436	ENSRROG00000005025	TDP2	92	54.225	Rhinopithecus_roxellana
ENSPKIG00000006483	tdp2b	94	53.868	ENSSBOG00000028734	TDP2	90	56.475	Saimiri_boliviensis_boliviensis
ENSPKIG00000006483	tdp2b	94	54.624	ENSSHAG00000002506	TDP2	90	54.624	Sarcophilus_harrisii
ENSPKIG00000006483	tdp2b	75	55.769	ENSSFOG00015011322	-	73	55.769	Scleropages_formosus
ENSPKIG00000006483	tdp2b	75	53.818	ENSSARG00000013547	TDP2	99	53.818	Sorex_araneus
ENSPKIG00000006483	tdp2b	95	50.843	ENSSPUG00000008288	TDP2	99	49.865	Sphenodon_punctatus
ENSPKIG00000006483	tdp2b	94	54.913	ENSSSCG00000001092	TDP2	99	52.973	Sus_scrofa
ENSPKIG00000006483	tdp2b	68	56.349	ENSTGUG00000009035	TDP2	97	56.349	Taeniopygia_guttata
ENSPKIG00000006483	tdp2b	69	56.589	ENSTRUG00000012218	-	89	56.589	Takifugu_rubripes
ENSPKIG00000006483	tdp2b	97	67.778	ENSTRUG00000014347	tdp2b	97	67.778	Takifugu_rubripes
ENSPKIG00000006483	tdp2b	70	57.634	ENSTNIG00000010260	TDP2	99	57.634	Tetraodon_nigroviridis
ENSPKIG00000006483	tdp2b	97	65.193	ENSTNIG00000017792	tdp2b	97	65.193	Tetraodon_nigroviridis
ENSPKIG00000006483	tdp2b	95	53.582	ENSTTRG00000016376	TDP2	93	54.261	Tursiops_truncatus
ENSPKIG00000006483	tdp2b	93	51.312	ENSUAMG00000025939	TDP2	92	51.312	Ursus_americanus
ENSPKIG00000006483	tdp2b	75	55.396	ENSUMAG00000020111	TDP2	91	55.396	Ursus_maritimus
ENSPKIG00000006483	tdp2b	95	54.728	ENSXETG00000014826	tdp2	93	54.728	Xenopus_tropicalis
ENSPKIG00000006483	tdp2b	67	53.968	ENSXCOG00000010778	-	70	53.968	Xiphophorus_couchianus
ENSPKIG00000006483	tdp2b	68	54.150	ENSXMAG00000022252	-	73	54.150	Xiphophorus_maculatus