EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000006489 (Gene tree)
Gene ID: 111847131
Gene Symbol: sbds
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6513 bases
Position: chrPGUA01000165.1:737143-743655
Accession: 111847131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022519	SBDS	PF01172.18	2.6e-34	1	1
ENSPKIP00000022519	SBDS_C	PF09377.10	9.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003186	-	5445	-	ENSPKIP00000022519	250 (aa)	XP_023673815	UPI000CD5FD8F

Gene Model

Click here to download ENSPKIG00000006489's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006489's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006489	sbds	100	84.400	ENSG00000126524	SBDS	100	84.400	Homo_sapiens
ENSPKIG00000006489	sbds	99	92.771	ENSAPOG00000014285	sbds	100	92.771	Acanthochromis_polyacanthus
ENSPKIG00000006489	sbds	100	84.400	ENSAMEG00000018167	SBDS	100	84.400	Ailuropoda_melanoleuca
ENSPKIG00000006489	sbds	99	90.873	ENSACIG00000007308	sbds	100	90.873	Amphilophus_citrinellus
ENSPKIG00000006489	sbds	99	93.574	ENSAOCG00000016770	sbds	100	93.574	Amphiprion_ocellaris
ENSPKIG00000006489	sbds	99	93.173	ENSAPEG00000015897	sbds	100	93.173	Amphiprion_percula
ENSPKIG00000006489	sbds	99	91.566	ENSATEG00000006901	sbds	100	91.566	Anabas_testudineus
ENSPKIG00000006489	sbds	83	83.575	ENSANAG00000037501	-	100	83.575	Aotus_nancymaae
ENSPKIG00000006489	sbds	92	78.355	ENSANAG00000024342	-	97	78.355	Aotus_nancymaae
ENSPKIG00000006489	sbds	99	92.771	ENSACLG00000018750	sbds	100	92.771	Astatotilapia_calliptera
ENSPKIG00000006489	sbds	100	94.000	ENSAMXG00000005361	sbds	100	94.000	Astyanax_mexicanus
ENSPKIG00000006489	sbds	100	84.400	ENSBTAG00000004051	SBDS	100	84.400	Bos_taurus
ENSPKIG00000006489	sbds	98	59.756	WBGene00021063	sbds-1	97	59.756	Caenorhabditis_elegans
ENSPKIG00000006489	sbds	100	84.400	ENSCJAG00000041007	SBDS	100	84.400	Callithrix_jacchus
ENSPKIG00000006489	sbds	100	82.540	ENSCAFG00000010797	SBDS	100	82.540	Canis_familiaris
ENSPKIG00000006489	sbds	100	84.400	ENSCAFG00020005357	SBDS	100	84.400	Canis_lupus_dingo
ENSPKIG00000006489	sbds	100	84.400	ENSCHIG00000026854	SBDS	100	84.400	Capra_hircus
ENSPKIG00000006489	sbds	100	84.400	ENSTSYG00000033822	SBDS	100	84.400	Carlito_syrichta
ENSPKIG00000006489	sbds	66	84.146	ENSCAPG00000006634	SBDS	100	84.146	Cavia_aperea
ENSPKIG00000006489	sbds	100	85.200	ENSCPOG00000036143	SBDS	100	85.200	Cavia_porcellus
ENSPKIG00000006489	sbds	100	84.400	ENSCCAG00000020671	SBDS	100	84.400	Cebus_capucinus
ENSPKIG00000006489	sbds	100	84.400	ENSCATG00000039026	SBDS	100	84.400	Cercocebus_atys
ENSPKIG00000006489	sbds	100	85.600	ENSCLAG00000005721	-	100	85.600	Chinchilla_lanigera
ENSPKIG00000006489	sbds	99	59.677	ENSCLAG00000002113	-	99	59.677	Chinchilla_lanigera
ENSPKIG00000006489	sbds	100	84.400	ENSCSAG00000018275	SBDS	100	84.400	Chlorocebus_sabaeus
ENSPKIG00000006489	sbds	100	79.600	ENSCHOG00000003795	SBDS	100	79.600	Choloepus_hoffmanni
ENSPKIG00000006489	sbds	100	88.800	ENSCPBG00000014893	SBDS	100	88.800	Chrysemys_picta_bellii
ENSPKIG00000006489	sbds	99	66.935	ENSCSAVG00000011811	-	99	66.935	Ciona_savignyi
ENSPKIG00000006489	sbds	100	84.000	ENSCANG00000032368	SBDS	100	84.000	Colobus_angolensis_palliatus
ENSPKIG00000006489	sbds	66	82.927	ENSCGRG00001019886	Sbds	100	82.927	Cricetulus_griseus_chok1gshd
ENSPKIG00000006489	sbds	83	83.575	ENSCGRG00000009211	Sbds	100	83.575	Cricetulus_griseus_crigri
ENSPKIG00000006489	sbds	99	91.566	ENSCSEG00000005798	sbds	100	91.566	Cynoglossus_semilaevis
ENSPKIG00000006489	sbds	99	89.558	ENSCVAG00000001053	sbds	100	89.558	Cyprinodon_variegatus
ENSPKIG00000006489	sbds	100	91.600	ENSDARG00000027803	sbds	100	91.600	Danio_rerio
ENSPKIG00000006489	sbds	100	84.400	ENSDNOG00000041174	SBDS	100	84.400	Dasypus_novemcinctus
ENSPKIG00000006489	sbds	100	85.600	ENSDORG00000026218	Sbds	100	85.600	Dipodomys_ordii
ENSPKIG00000006489	sbds	90	63.158	FBgn0035714	CG8549	98	62.753	Drosophila_melanogaster
ENSPKIG00000006489	sbds	93	59.227	ENSEBUG00000015780	sbds	100	59.227	Eptatretus_burgeri
ENSPKIG00000006489	sbds	100	84.400	ENSEASG00005008821	SBDS	100	84.400	Equus_asinus_asinus
ENSPKIG00000006489	sbds	100	84.400	ENSECAG00000008202	SBDS	100	84.400	Equus_caballus
ENSPKIG00000006489	sbds	83	65.385	ENSEEUG00000004768	SBDS	100	65.385	Erinaceus_europaeus
ENSPKIG00000006489	sbds	100	89.600	ENSELUG00000008382	sbds	100	89.600	Esox_lucius
ENSPKIG00000006489	sbds	100	84.000	ENSFCAG00000022142	SBDS	100	84.000	Felis_catus
ENSPKIG00000006489	sbds	100	88.800	ENSFALG00000013808	SBDS	100	88.800	Ficedula_albicollis
ENSPKIG00000006489	sbds	100	85.200	ENSFDAG00000018947	-	100	85.200	Fukomys_damarensis
ENSPKIG00000006489	sbds	99	85.944	ENSFHEG00000000708	sbds	100	85.944	Fundulus_heteroclitus
ENSPKIG00000006489	sbds	100	90.000	ENSGMOG00000018356	sbds	99	90.000	Gadus_morhua
ENSPKIG00000006489	sbds	100	86.400	ENSGALG00000027989	SBDS	100	86.400	Gallus_gallus
ENSPKIG00000006489	sbds	92	85.652	ENSGAFG00000014204	sbds	100	85.652	Gambusia_affinis
ENSPKIG00000006489	sbds	99	89.960	ENSGACG00000012697	sbds	100	89.960	Gasterosteus_aculeatus
ENSPKIG00000006489	sbds	86	89.720	ENSGAGG00000022402	SBDS	100	89.720	Gopherus_agassizii
ENSPKIG00000006489	sbds	96	65.975	ENSGGOG00000040023	-	92	65.975	Gorilla_gorilla
ENSPKIG00000006489	sbds	99	92.771	ENSHBUG00000002660	sbds	100	92.771	Haplochromis_burtoni
ENSPKIG00000006489	sbds	100	83.600	ENSHGLG00000009671	SBDS	100	83.600	Heterocephalus_glaber_female
ENSPKIG00000006489	sbds	100	83.600	ENSHGLG00100011332	SBDS	100	83.600	Heterocephalus_glaber_male
ENSPKIG00000006489	sbds	99	87.952	ENSHCOG00000018606	sbds	100	87.952	Hippocampus_comes
ENSPKIG00000006489	sbds	100	92.800	ENSIPUG00000006536	sbds	100	92.800	Ictalurus_punctatus
ENSPKIG00000006489	sbds	100	61.265	ENSJJAG00000003934	-	100	61.265	Jaculus_jaculus
ENSPKIG00000006489	sbds	100	82.800	ENSJJAG00000012033	-	100	82.800	Jaculus_jaculus
ENSPKIG00000006489	sbds	99	91.165	ENSKMAG00000018542	sbds	100	91.165	Kryptolebias_marmoratus
ENSPKIG00000006489	sbds	99	90.763	ENSLBEG00000016687	sbds	100	90.763	Labrus_bergylta
ENSPKIG00000006489	sbds	100	75.197	ENSLACG00000018916	SBDS	100	75.197	Latimeria_chalumnae
ENSPKIG00000006489	sbds	100	94.000	ENSLOCG00000004073	sbds	100	94.000	Lepisosteus_oculatus
ENSPKIG00000006489	sbds	100	84.400	ENSLAFG00000008763	SBDS	100	84.400	Loxodonta_africana
ENSPKIG00000006489	sbds	100	84.400	ENSMFAG00000032620	SBDS	100	84.400	Macaca_fascicularis
ENSPKIG00000006489	sbds	100	84.400	ENSMMUG00000045653	SBDS	100	84.400	Macaca_mulatta
ENSPKIG00000006489	sbds	100	84.400	ENSMNEG00000031523	SBDS	100	84.400	Macaca_nemestrina
ENSPKIG00000006489	sbds	100	66.535	ENSMLEG00000036826	SBDS	100	66.535	Mandrillus_leucophaeus
ENSPKIG00000006489	sbds	99	91.968	ENSMAMG00000016062	sbds	100	91.968	Mastacembelus_armatus
ENSPKIG00000006489	sbds	99	92.771	ENSMZEG00005024385	sbds	100	92.771	Maylandia_zebra
ENSPKIG00000006489	sbds	100	86.400	ENSMGAG00000002119	SBDS	100	86.400	Meleagris_gallopavo
ENSPKIG00000006489	sbds	99	68.273	ENSMAUG00000022214	-	100	68.273	Mesocricetus_auratus
ENSPKIG00000006489	sbds	100	84.400	ENSMICG00000014366	SBDS	100	84.400	Microcebus_murinus
ENSPKIG00000006489	sbds	100	84.800	ENSMOCG00000011739	Sbds	100	84.800	Microtus_ochrogaster
ENSPKIG00000006489	sbds	99	82.000	ENSMMOG00000005061	sbds	100	82.000	Mola_mola
ENSPKIG00000006489	sbds	100	86.000	ENSMODG00000006644	SBDS	100	86.000	Monodelphis_domestica
ENSPKIG00000006489	sbds	99	88.353	ENSMALG00000010219	sbds	100	88.353	Monopterus_albus
ENSPKIG00000006489	sbds	100	85.600	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSPKIG00000006489	sbds	100	86.000	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSPKIG00000006489	sbds	100	85.600	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSPKIG00000006489	sbds	100	86.000	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSPKIG00000006489	sbds	67	85.714	ENSMPUG00000016192	SBDS	97	85.714	Mustela_putorius_furo
ENSPKIG00000006489	sbds	73	81.868	ENSMLUG00000013575	SBDS	100	81.868	Myotis_lucifugus
ENSPKIG00000006489	sbds	100	85.600	ENSNGAG00000012093	Sbds	100	85.600	Nannospalax_galili
ENSPKIG00000006489	sbds	99	92.771	ENSNBRG00000017027	sbds	100	92.771	Neolamprologus_brichardi
ENSPKIG00000006489	sbds	100	84.400	ENSNLEG00000013288	SBDS	100	84.400	Nomascus_leucogenys
ENSPKIG00000006489	sbds	100	84.800	ENSOPRG00000008721	SBDS	100	84.800	Ochotona_princeps
ENSPKIG00000006489	sbds	100	76.800	ENSODEG00000019253	-	84	76.800	Octodon_degus
ENSPKIG00000006489	sbds	99	66.265	ENSODEG00000000137	-	85	68.800	Octodon_degus
ENSPKIG00000006489	sbds	99	67.068	ENSODEG00000001116	-	99	67.068	Octodon_degus
ENSPKIG00000006489	sbds	99	92.771	ENSONIG00000005874	sbds	100	92.771	Oreochromis_niloticus
ENSPKIG00000006489	sbds	83	83.575	ENSOANG00000007674	-	100	83.575	Ornithorhynchus_anatinus
ENSPKIG00000006489	sbds	100	85.200	ENSOCUG00000003170	SBDS	100	85.200	Oryctolagus_cuniculus
ENSPKIG00000006489	sbds	99	87.952	ENSORLG00000023489	sbds	100	87.952	Oryzias_latipes
ENSPKIG00000006489	sbds	99	87.149	ENSORLG00020019282	sbds	100	87.149	Oryzias_latipes_hni
ENSPKIG00000006489	sbds	99	87.149	ENSORLG00015008005	sbds	100	87.149	Oryzias_latipes_hsok
ENSPKIG00000006489	sbds	99	87.550	ENSOMEG00000022747	sbds	100	87.550	Oryzias_melastigma
ENSPKIG00000006489	sbds	100	71.200	ENSOGAG00000015036	-	100	71.200	Otolemur_garnettii
ENSPKIG00000006489	sbds	100	84.800	ENSOGAG00000009011	-	100	84.800	Otolemur_garnettii
ENSPKIG00000006489	sbds	100	84.400	ENSOARG00000010609	SBDS	100	84.400	Ovis_aries
ENSPKIG00000006489	sbds	100	83.600	ENSPPAG00000043889	-	100	83.600	Pan_paniscus
ENSPKIG00000006489	sbds	100	84.000	ENSPPRG00000002307	SBDS	100	84.000	Panthera_pardus
ENSPKIG00000006489	sbds	100	84.000	ENSPTIG00000021308	SBDS	100	84.000	Panthera_tigris_altaica
ENSPKIG00000006489	sbds	100	84.400	ENSPTRG00000019254	SBDS	100	84.400	Pan_troglodytes
ENSPKIG00000006489	sbds	100	72.000	ENSPTRG00000047744	-	100	72.000	Pan_troglodytes
ENSPKIG00000006489	sbds	87	81.567	ENSPTRG00000048174	-	96	81.567	Pan_troglodytes
ENSPKIG00000006489	sbds	100	72.000	ENSPTRG00000050835	-	100	72.000	Pan_troglodytes
ENSPKIG00000006489	sbds	100	84.000	ENSPANG00000004078	SBDS	100	84.000	Papio_anubis
ENSPKIG00000006489	sbds	83	87.500	ENSPSIG00000014603	SBDS	100	87.500	Pelodiscus_sinensis
ENSPKIG00000006489	sbds	99	91.566	ENSPMGG00000004246	sbds	100	91.566	Periophthalmus_magnuspinnatus
ENSPKIG00000006489	sbds	100	85.600	ENSPEMG00000008728	Sbds	100	85.600	Peromyscus_maniculatus_bairdii
ENSPKIG00000006489	sbds	100	86.000	ENSPCIG00000029718	SBDS	100	86.000	Phascolarctos_cinereus
ENSPKIG00000006489	sbds	99	88.353	ENSPFOG00000015837	sbds	100	88.353	Poecilia_formosa
ENSPKIG00000006489	sbds	99	88.755	ENSPLAG00000003641	sbds	100	88.755	Poecilia_latipinna
ENSPKIG00000006489	sbds	99	88.353	ENSPMEG00000019483	sbds	100	88.353	Poecilia_mexicana
ENSPKIG00000006489	sbds	99	88.353	ENSPREG00000018758	sbds	100	88.353	Poecilia_reticulata
ENSPKIG00000006489	sbds	100	84.400	ENSPPYG00000017513	SBDS	100	84.400	Pongo_abelii
ENSPKIG00000006489	sbds	100	84.000	ENSPCOG00000021098	SBDS	100	84.000	Propithecus_coquereli
ENSPKIG00000006489	sbds	100	84.000	ENSPVAG00000009369	SBDS	100	84.000	Pteropus_vampyrus
ENSPKIG00000006489	sbds	99	92.369	ENSPNYG00000022403	sbds	100	92.369	Pundamilia_nyererei
ENSPKIG00000006489	sbds	100	93.600	ENSPNAG00000001120	sbds	100	93.600	Pygocentrus_nattereri
ENSPKIG00000006489	sbds	100	85.200	ENSRNOG00000000888	Sbds	100	85.200	Rattus_norvegicus
ENSPKIG00000006489	sbds	100	84.400	ENSRBIG00000035557	SBDS	100	84.400	Rhinopithecus_bieti
ENSPKIG00000006489	sbds	100	68.400	ENSRROG00000041986	-	100	66.400	Rhinopithecus_roxellana
ENSPKIG00000006489	sbds	100	84.400	ENSRROG00000040842	-	100	84.400	Rhinopithecus_roxellana
ENSPKIG00000006489	sbds	96	43.089	YLR022C	-	96	42.041	Saccharomyces_cerevisiae
ENSPKIG00000006489	sbds	93	82.328	ENSSBOG00000022460	SBDS	100	82.328	Saimiri_boliviensis_boliviensis
ENSPKIG00000006489	sbds	100	74.800	ENSSHAG00000010263	SBDS	100	74.800	Sarcophilus_harrisii
ENSPKIG00000006489	sbds	100	96.000	ENSSFOG00015001108	sbds	100	96.000	Scleropages_formosus
ENSPKIG00000006489	sbds	99	89.558	ENSSMAG00000020506	sbds	100	89.558	Scophthalmus_maximus
ENSPKIG00000006489	sbds	99	91.566	ENSSDUG00000001528	sbds	100	91.566	Seriola_dumerili
ENSPKIG00000006489	sbds	99	91.165	ENSSLDG00000003659	sbds	100	91.165	Seriola_lalandi_dorsalis
ENSPKIG00000006489	sbds	73	88.372	ENSSARG00000001899	-	73	88.372	Sorex_araneus
ENSPKIG00000006489	sbds	61	87.582	ENSSARG00000013132	-	100	87.582	Sorex_araneus
ENSPKIG00000006489	sbds	100	85.600	ENSSPUG00000002699	SBDS	100	85.600	Sphenodon_punctatus
ENSPKIG00000006489	sbds	99	92.369	ENSSPAG00000016419	sbds	100	85.600	Stegastes_partitus
ENSPKIG00000006489	sbds	100	84.400	ENSSSCG00000007732	SBDS	100	84.400	Sus_scrofa
ENSPKIG00000006489	sbds	66	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSPKIG00000006489	sbds	99	90.763	ENSTRUG00000021443	sbds	100	90.763	Takifugu_rubripes
ENSPKIG00000006489	sbds	99	90.763	ENSTNIG00000019000	sbds	100	90.763	Tetraodon_nigroviridis
ENSPKIG00000006489	sbds	83	71.154	ENSTBEG00000001178	SBDS	100	69.712	Tupaia_belangeri
ENSPKIG00000006489	sbds	100	66.800	ENSTTRG00000003921	SBDS	100	66.800	Tursiops_truncatus
ENSPKIG00000006489	sbds	100	84.400	ENSUAMG00000001326	SBDS	100	84.400	Ursus_americanus
ENSPKIG00000006489	sbds	100	84.400	ENSUMAG00000015353	SBDS	100	84.400	Ursus_maritimus
ENSPKIG00000006489	sbds	100	84.400	ENSVVUG00000016478	SBDS	100	84.400	Vulpes_vulpes
ENSPKIG00000006489	sbds	100	87.600	ENSXETG00000010093	sbds	100	87.600	Xenopus_tropicalis
ENSPKIG00000006489	sbds	99	78.715	ENSXCOG00000010639	sbds	100	78.715	Xiphophorus_couchianus
ENSPKIG00000006489	sbds	99	89.157	ENSXMAG00000006065	sbds	100	89.157	Xiphophorus_maculatus