EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006616 (Gene tree)
Gene ID: 111844066
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 10447 bases
Position: chrPGUA01000131.1:969386-979832
Accession: 111844066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	1	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	2	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	3	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	4	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	5	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	6	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	7	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	8	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	9	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	10	11
ENSPKIP00000022721	zf-C2H2	PF00096.26	1.6e-63	11	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	1	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	2	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	3	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	4	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	5	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	6	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	7	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	8	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	9	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	10	11
ENSPKIP00000022703	zf-C2H2	PF00096.26	5.1e-63	11	11
ENSPKIP00000022721	zf-met	PF12874.7	6.3e-09	1	3
ENSPKIP00000022721	zf-met	PF12874.7	6.3e-09	2	3
ENSPKIP00000022721	zf-met	PF12874.7	6.3e-09	3	3
ENSPKIP00000022703	zf-met	PF12874.7	1.8e-08	1	2
ENSPKIP00000022703	zf-met	PF12874.7	1.8e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003392	-	3006	-	ENSPKIP00000022721	690 (aa)	XP_023667949	UPI000CD5D2B6
ENSPKIT00000003373	-	3853	-	ENSPKIP00000022703	743 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006616	-	59	36.364	ENSPKIG00000020637	PRDM15	53	36.364
ENSPKIG00000006616	-	92	57.143	ENSPKIG00000014786	-	92	57.143
ENSPKIG00000006616	-	61	58.380	ENSPKIG00000006563	-	92	57.841
ENSPKIG00000006616	-	59	39.048	ENSPKIG00000015492	prdm5	72	39.048
ENSPKIG00000006616	-	60	44.654	ENSPKIG00000017781	-	69	46.316
ENSPKIG00000006616	-	63	53.125	ENSPKIG00000012290	-	100	53.125
ENSPKIG00000006616	-	57	33.333	ENSPKIG00000019584	patz1	57	31.579
ENSPKIG00000006616	-	56	42.857	ENSPKIG00000014203	ZIC2	66	34.921
ENSPKIG00000006616	-	60	37.126	ENSPKIG00000001942	e4f1	63	37.126
ENSPKIG00000006616	-	60	30.000	ENSPKIG00000023946	znf341	53	30.628
ENSPKIG00000006616	-	90	55.484	ENSPKIG00000002670	-	99	52.819
ENSPKIG00000006616	-	59	33.810	ENSPKIG00000008355	-	60	33.810
ENSPKIG00000006616	-	57	42.857	ENSPKIG00000022303	SCRT1	54	42.857
ENSPKIG00000006616	-	82	45.714	ENSPKIG00000018168	znf236	80	45.714
ENSPKIG00000006616	-	59	44.643	ENSPKIG00000015951	-	68	44.248
ENSPKIG00000006616	-	59	49.000	ENSPKIG00000012069	-	99	45.607
ENSPKIG00000006616	-	64	45.641	ENSPKIG00000020324	-	56	45.045
ENSPKIG00000006616	-	57	41.071	ENSPKIG00000020085	scrt1a	55	41.071
ENSPKIG00000006616	-	58	36.364	ENSPKIG00000016928	znf526	59	36.364
ENSPKIG00000006616	-	60	40.000	ENSPKIG00000007643	gfi1b	57	40.000
ENSPKIG00000006616	-	60	39.048	ENSPKIG00000006067	-	75	40.789
ENSPKIG00000006616	-	69	36.364	ENSPKIG00000015139	znf319b	88	36.243
ENSPKIG00000006616	-	60	47.887	ENSPKIG00000010773	-	90	47.887
ENSPKIG00000006616	-	99	46.154	ENSPKIG00000020222	-	91	46.341
ENSPKIG00000006616	-	67	34.783	ENSPKIG00000006393	snai1a	56	34.783
ENSPKIG00000006616	-	60	58.670	ENSPKIG00000009111	-	99	58.670
ENSPKIG00000006616	-	68	53.061	ENSPKIG00000007074	sall4	61	51.020
ENSPKIG00000006616	-	59	33.019	ENSPKIG00000001492	-	93	33.019
ENSPKIG00000006616	-	99	58.182	ENSPKIG00000014111	si:dkey-210j14.4	97	58.182
ENSPKIG00000006616	-	57	35.780	ENSPKIG00000018202	-	62	35.780
ENSPKIG00000006616	-	57	41.481	ENSPKIG00000002254	SNAI2	61	41.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006616	-	100	50.785	ENSAPOG00000013511	-	92	50.785	Acanthochromis_polyacanthus
ENSPKIG00000006616	-	63	38.988	ENSAPOG00000004328	-	91	38.988	Acanthochromis_polyacanthus
ENSPKIG00000006616	-	58	37.419	ENSACIG00000010739	-	80	37.419	Amphilophus_citrinellus
ENSPKIG00000006616	-	69	38.652	ENSAOCG00000007045	-	94	38.764	Amphiprion_ocellaris
ENSPKIG00000006616	-	58	45.596	ENSAPEG00000001596	-	73	45.596	Amphiprion_percula
ENSPKIG00000006616	-	100	45.415	ENSAPEG00000016483	-	96	46.066	Amphiprion_percula
ENSPKIG00000006616	-	61	41.099	ENSATEG00000006085	-	85	41.099	Anabas_testudineus
ENSPKIG00000006616	-	58	49.194	ENSACAG00000025537	-	96	49.194	Anolis_carolinensis
ENSPKIG00000006616	-	59	48.346	ENSACAG00000000082	-	99	48.346	Anolis_carolinensis
ENSPKIG00000006616	-	60	53.614	ENSAMXG00000033013	-	83	53.614	Astyanax_mexicanus
ENSPKIG00000006616	-	59	49.863	ENSAMXG00000026143	-	95	49.402	Astyanax_mexicanus
ENSPKIG00000006616	-	59	57.303	ENSAMXG00000035949	-	77	53.559	Astyanax_mexicanus
ENSPKIG00000006616	-	62	52.105	ENSAMXG00000012873	-	91	52.105	Astyanax_mexicanus
ENSPKIG00000006616	-	59	51.389	ENSAMXG00000032237	-	93	51.389	Astyanax_mexicanus
ENSPKIG00000006616	-	59	50.598	ENSAMXG00000036257	-	92	49.558	Astyanax_mexicanus
ENSPKIG00000006616	-	60	58.065	ENSAMXG00000035145	-	63	53.846	Astyanax_mexicanus
ENSPKIG00000006616	-	59	39.378	ENSCVAG00000011235	-	90	39.378	Cyprinodon_variegatus
ENSPKIG00000006616	-	70	37.452	ENSELUG00000013844	-	97	42.947	Esox_lucius
ENSPKIG00000006616	-	59	44.504	ENSELUG00000013357	-	82	44.504	Esox_lucius
ENSPKIG00000006616	-	59	44.920	ENSELUG00000021287	-	76	44.920	Esox_lucius
ENSPKIG00000006616	-	60	57.746	ENSFHEG00000019915	-	80	57.746	Fundulus_heteroclitus
ENSPKIG00000006616	-	64	44.545	ENSGMOG00000003238	-	99	44.954	Gadus_morhua
ENSPKIG00000006616	-	100	43.165	ENSGAFG00000003150	-	95	51.724	Gambusia_affinis
ENSPKIG00000006616	-	63	39.541	ENSGAFG00000012977	-	89	39.541	Gambusia_affinis
ENSPKIG00000006616	-	59	54.268	ENSIPUG00000021556	-	90	54.268	Ictalurus_punctatus
ENSPKIG00000006616	-	60	49.876	ENSIPUG00000006916	-	79	49.876	Ictalurus_punctatus
ENSPKIG00000006616	-	59	50.000	ENSIPUG00000004428	-	74	50.000	Ictalurus_punctatus
ENSPKIG00000006616	-	60	41.732	ENSKMAG00000004988	-	90	41.732	Kryptolebias_marmoratus
ENSPKIG00000006616	-	58	47.436	ENSLOCG00000014366	-	98	47.742	Lepisosteus_oculatus
ENSPKIG00000006616	-	59	45.000	ENSLOCG00000014144	-	100	49.390	Lepisosteus_oculatus
ENSPKIG00000006616	-	60	45.833	ENSMAMG00000019301	-	94	45.833	Mastacembelus_armatus
ENSPKIG00000006616	-	100	46.275	ENSMAMG00000016542	-	99	46.552	Mastacembelus_armatus
ENSPKIG00000006616	-	58	42.391	ENSMMOG00000009852	-	86	42.391	Mola_mola
ENSPKIG00000006616	-	59	63.095	ENSMALG00000005554	-	88	63.095	Monopterus_albus
ENSPKIG00000006616	-	59	40.496	ENSOCUG00000005876	-	100	41.615	Oryctolagus_cuniculus
ENSPKIG00000006616	-	58	40.370	ENSPMGG00000017633	-	88	40.370	Periophthalmus_magnuspinnatus
ENSPKIG00000006616	-	62	37.209	ENSPFOG00000010682	-	99	36.965	Poecilia_formosa
ENSPKIG00000006616	-	59	43.824	ENSPLAG00000002892	-	69	43.824	Poecilia_latipinna
ENSPKIG00000006616	-	60	39.386	ENSPMEG00000001399	-	91	39.386	Poecilia_mexicana
ENSPKIG00000006616	-	60	39.386	ENSPREG00000001386	-	91	39.386	Poecilia_reticulata
ENSPKIG00000006616	-	54	40.860	ENSPREG00000002582	-	61	42.194	Poecilia_reticulata
ENSPKIG00000006616	-	59	49.398	ENSPNAG00000000219	-	85	48.204	Pygocentrus_nattereri
ENSPKIG00000006616	-	61	40.722	ENSPNAG00000025570	-	81	48.905	Pygocentrus_nattereri
ENSPKIG00000006616	-	59	55.696	ENSPNAG00000015116	-	68	53.036	Pygocentrus_nattereri
ENSPKIG00000006616	-	100	67.468	ENSSFOG00015006108	-	99	67.468	Scleropages_formosus
ENSPKIG00000006616	-	74	47.727	ENSSMAG00000009115	-	95	57.692	Scophthalmus_maximus
ENSPKIG00000006616	-	59	42.147	ENSSDUG00000006463	-	86	42.147	Seriola_dumerili
ENSPKIG00000006616	-	100	45.028	ENSSDUG00000002195	-	96	53.153	Seriola_dumerili
ENSPKIG00000006616	-	59	46.471	ENSSLDG00000006724	-	99	42.683	Seriola_lalandi_dorsalis
ENSPKIG00000006616	-	59	46.245	ENSSLDG00000020727	-	96	45.455	Seriola_lalandi_dorsalis
ENSPKIG00000006616	-	82	56.098	ENSSPAG00000021008	-	94	56.098	Stegastes_partitus
ENSPKIG00000006616	-	59	46.988	ENSSPAG00000012960	-	82	46.988	Stegastes_partitus
ENSPKIG00000006616	-	57	39.357	ENSTRUG00000021675	-	77	39.357	Takifugu_rubripes
ENSPKIG00000006616	-	100	52.809	ENSTRUG00000005321	-	95	44.620	Takifugu_rubripes
ENSPKIG00000006616	-	57	47.788	ENSTNIG00000000320	-	100	45.810	Tetraodon_nigroviridis
ENSPKIG00000006616	-	58	39.024	ENSTNIG00000008200	-	100	39.024	Tetraodon_nigroviridis
ENSPKIG00000006616	-	65	47.508	ENSXETG00000006575	znf420	86	47.508	Xenopus_tropicalis
ENSPKIG00000006616	-	58	52.098	ENSXCOG00000009665	-	86	51.852	Xiphophorus_couchianus
ENSPKIG00000006616	-	62	37.674	ENSXMAG00000028625	-	91	37.674	Xiphophorus_maculatus