EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000006650 (Gene tree)
Gene ID: 111859589
Gene Symbol: larsb
Alias: -
Full Name: leucyl-tRNA synthetase b
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 18507 bases
Position: chrPGUA01000383.1:104680-123186
Accession: ZDB-GENE-030114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000022851	tRNA-synt_1g	PF09334.11	4.6e-18	1	2
ENSPKIP00000022851	tRNA-synt_1g	PF09334.11	4.6e-18	2	2
ENSPKIP00000022930	tRNA-synt_1g	PF09334.11	1e-11	1	1
ENSPKIP00000022930	Anticodon_1	PF08264.13	9.8e-15	1	1
ENSPKIP00000022851	Anticodon_1	PF08264.13	1e-14	1	1
ENSPKIP00000022851	tRNA-synt_1	PF00133.22	6.7e-40	1	2
ENSPKIP00000022851	tRNA-synt_1	PF00133.22	6.7e-40	2	2
ENSPKIP00000022930	tRNA-synt_1	PF00133.22	4.1e-36	1	2
ENSPKIP00000022930	tRNA-synt_1	PF00133.22	4.1e-36	2	2
ENSPKIP00000022851	tRNA-synt_1e	PF01406.19	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003602	-	3501	-	ENSPKIP00000022930	1166 (aa)	-	-
ENSPKIT00000003523	-	8057	-	ENSPKIP00000022851	1229 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006650's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006650	larsb	99	77.373	ENSG00000133706	LARS	100	78.191	Homo_sapiens
ENSPKIG00000006650	larsb	99	81.818	ENSAPOG00000010585	larsb	100	85.000	Acanthochromis_polyacanthus
ENSPKIG00000006650	larsb	99	77.327	ENSAMEG00000017584	LARS	100	77.327	Ailuropoda_melanoleuca
ENSPKIG00000006650	larsb	99	80.506	ENSACIG00000014026	larsb	98	82.973	Amphilophus_citrinellus
ENSPKIG00000006650	larsb	99	81.902	ENSAOCG00000016931	larsb	98	84.542	Amphiprion_ocellaris
ENSPKIG00000006650	larsb	99	81.987	ENSAPEG00000017720	larsb	98	84.629	Amphiprion_percula
ENSPKIG00000006650	larsb	99	78.862	ENSATEG00000010441	larsb	97	81.217	Anabas_testudineus
ENSPKIG00000006650	larsb	97	77.739	ENSAPLG00000008145	LARS	100	77.739	Anas_platyrhynchos
ENSPKIG00000006650	larsb	99	75.085	ENSACAG00000013916	LARS	98	77.411	Anolis_carolinensis
ENSPKIG00000006650	larsb	99	69.113	ENSANAG00000014375	LARS	99	69.113	Aotus_nancymaae
ENSPKIG00000006650	larsb	99	82.650	ENSACLG00000010881	larsb	98	84.542	Astatotilapia_calliptera
ENSPKIG00000006650	larsb	99	83.404	ENSAMXG00000019979	larsb	98	85.690	Astyanax_mexicanus
ENSPKIG00000006650	larsb	100	76.799	ENSBTAG00000006765	LARS	100	76.799	Bos_taurus
ENSPKIG00000006650	larsb	99	54.132	WBGene00003073	lars-1	99	54.384	Caenorhabditis_elegans
ENSPKIG00000006650	larsb	99	76.610	ENSCJAG00000021314	LARS	100	77.482	Callithrix_jacchus
ENSPKIG00000006650	larsb	99	77.712	ENSCAFG00000006431	LARS	98	79.253	Canis_familiaris
ENSPKIG00000006650	larsb	100	77.731	ENSCAFG00020025009	LARS	100	77.731	Canis_lupus_dingo
ENSPKIG00000006650	larsb	99	77.034	ENSCHIG00000014949	LARS	98	78.385	Capra_hircus
ENSPKIG00000006650	larsb	99	77.203	ENSTSYG00000001253	LARS	98	78.559	Carlito_syrichta
ENSPKIG00000006650	larsb	97	61.498	ENSCAPG00000015676	LARS	97	61.498	Cavia_aperea
ENSPKIG00000006650	larsb	99	76.061	ENSCPOG00000012329	LARS	98	77.257	Cavia_porcellus
ENSPKIG00000006650	larsb	99	77.288	ENSCCAG00000020789	LARS	98	79.130	Cebus_capucinus
ENSPKIG00000006650	larsb	97	77.914	ENSCATG00000033463	LARS	100	77.926	Cercocebus_atys
ENSPKIG00000006650	larsb	99	76.695	ENSCLAG00000011193	LARS	98	78.038	Chinchilla_lanigera
ENSPKIG00000006650	larsb	99	77.207	ENSCSAG00000012280	LARS	96	78.646	Chlorocebus_sabaeus
ENSPKIG00000006650	larsb	90	70.391	ENSCHOG00000009309	LARS	90	70.391	Choloepus_hoffmanni
ENSPKIG00000006650	larsb	100	78.069	ENSCPBG00000008415	LARS	99	80.523	Chrysemys_picta_bellii
ENSPKIG00000006650	larsb	98	62.414	ENSCING00000008535	-	97	63.628	Ciona_intestinalis
ENSPKIG00000006650	larsb	100	61.824	ENSCSAVG00000009040	-	98	71.057	Ciona_savignyi
ENSPKIG00000006650	larsb	100	77.392	ENSCANG00000031137	LARS	100	77.392	Colobus_angolensis_palliatus
ENSPKIG00000006650	larsb	94	72.364	ENSCGRG00001004647	Lars	99	72.364	Cricetulus_griseus_chok1gshd
ENSPKIG00000006650	larsb	99	74.385	ENSCGRG00000007284	Lars	98	75.542	Cricetulus_griseus_crigri
ENSPKIG00000006650	larsb	99	80.892	ENSCSEG00000014984	larsb	98	83.333	Cynoglossus_semilaevis
ENSPKIG00000006650	larsb	99	81.956	ENSCVAG00000014685	larsb	98	84.801	Cyprinodon_variegatus
ENSPKIG00000006650	larsb	68	81.818	ENSDARG00000019280	larsb	97	85.142	Danio_rerio
ENSPKIG00000006650	larsb	97	76.594	ENSDNOG00000017963	LARS	100	76.594	Dasypus_novemcinctus
ENSPKIG00000006650	larsb	100	73.021	ENSDORG00000014913	Lars	100	73.021	Dipodomys_ordii
ENSPKIG00000006650	larsb	99	57.696	FBgn0284253	LeuRS	99	57.611	Drosophila_melanogaster
ENSPKIG00000006650	larsb	94	61.948	ENSETEG00000003145	LARS	100	63.030	Echinops_telfairi
ENSPKIG00000006650	larsb	92	58.867	ENSEBUG00000014985	larsb	97	59.600	Eptatretus_burgeri
ENSPKIG00000006650	larsb	99	77.542	ENSEASG00005020569	LARS	100	77.665	Equus_asinus_asinus
ENSPKIG00000006650	larsb	99	77.458	ENSECAG00000008963	LARS	99	79.478	Equus_caballus
ENSPKIG00000006650	larsb	85	79.487	ENSEEUG00000014854	LARS	85	79.487	Erinaceus_europaeus
ENSPKIG00000006650	larsb	100	81.134	ENSELUG00000023311	larsb	98	83.695	Esox_lucius
ENSPKIG00000006650	larsb	100	77.307	ENSFCAG00000008715	LARS	100	79.981	Felis_catus
ENSPKIG00000006650	larsb	99	77.203	ENSFALG00000003209	LARS	93	77.203	Ficedula_albicollis
ENSPKIG00000006650	larsb	99	76.356	ENSFDAG00000020764	LARS	98	77.517	Fukomys_damarensis
ENSPKIG00000006650	larsb	92	80.645	ENSFHEG00000010437	larsb	97	85.007	Fundulus_heteroclitus
ENSPKIG00000006650	larsb	99	79.865	ENSGMOG00000013645	larsb	98	81.670	Gadus_morhua
ENSPKIG00000006650	larsb	99	78.220	ENSGALG00000007494	LARS	98	80.292	Gallus_gallus
ENSPKIG00000006650	larsb	100	80.896	ENSGAFG00000005029	larsb	98	84.629	Gambusia_affinis
ENSPKIG00000006650	larsb	99	80.102	ENSGACG00000020720	larsb	98	82.276	Gasterosteus_aculeatus
ENSPKIG00000006650	larsb	100	77.307	ENSGAGG00000002353	LARS	100	77.307	Gopherus_agassizii
ENSPKIG00000006650	larsb	99	77.288	ENSGGOG00000004103	LARS	98	78.733	Gorilla_gorilla
ENSPKIG00000006650	larsb	99	81.001	ENSHBUG00000003051	larsb	100	84.783	Haplochromis_burtoni
ENSPKIG00000006650	larsb	99	76.186	ENSHGLG00000006937	LARS	98	77.517	Heterocephalus_glaber_female
ENSPKIG00000006650	larsb	99	76.186	ENSHGLG00100002801	LARS	98	77.517	Heterocephalus_glaber_male
ENSPKIG00000006650	larsb	99	80.792	ENSHCOG00000003651	larsb	98	83.232	Hippocampus_comes
ENSPKIG00000006650	larsb	99	81.919	ENSIPUG00000010756	lars	99	83.854	Ictalurus_punctatus
ENSPKIG00000006650	larsb	99	76.780	ENSSTOG00000002356	LARS	98	78.385	Ictidomys_tridecemlineatus
ENSPKIG00000006650	larsb	99	76.271	ENSJJAG00000015265	Lars	98	77.431	Jaculus_jaculus
ENSPKIG00000006650	larsb	99	81.818	ENSKMAG00000009903	larsb	98	84.211	Kryptolebias_marmoratus
ENSPKIG00000006650	larsb	99	82.498	ENSLBEG00000025237	larsb	98	83.865	Labrus_bergylta
ENSPKIG00000006650	larsb	99	78.390	ENSLACG00000009321	LARS	98	80.191	Latimeria_chalumnae
ENSPKIG00000006650	larsb	99	80.763	ENSLOCG00000010442	larsb	98	82.537	Lepisosteus_oculatus
ENSPKIG00000006650	larsb	99	76.630	ENSLAFG00000000318	LARS	100	76.630	Loxodonta_africana
ENSPKIG00000006650	larsb	100	77.307	ENSMFAG00000038685	LARS	100	77.307	Macaca_fascicularis
ENSPKIG00000006650	larsb	99	77.288	ENSMMUG00000029787	LARS	98	78.733	Macaca_mulatta
ENSPKIG00000006650	larsb	100	76.805	ENSMNEG00000044014	LARS	100	76.805	Macaca_nemestrina
ENSPKIG00000006650	larsb	100	77.307	ENSMLEG00000037563	LARS	100	77.307	Mandrillus_leucophaeus
ENSPKIG00000006650	larsb	99	81.481	ENSMAMG00000021385	larsb	98	84.024	Mastacembelus_armatus
ENSPKIG00000006650	larsb	99	82.103	ENSMZEG00005002662	larsb	98	84.456	Maylandia_zebra
ENSPKIG00000006650	larsb	97	79.053	ENSMGAG00000009388	LARS	100	79.053	Meleagris_gallopavo
ENSPKIG00000006650	larsb	100	67.203	ENSMAUG00000003063	Lars	100	66.864	Mesocricetus_auratus
ENSPKIG00000006650	larsb	99	63.976	ENSMICG00000035435	-	99	63.976	Microcebus_murinus
ENSPKIG00000006650	larsb	100	77.477	ENSMICG00000035589	-	100	77.477	Microcebus_murinus
ENSPKIG00000006650	larsb	99	76.058	ENSMOCG00000002092	Lars	98	77.277	Microtus_ochrogaster
ENSPKIG00000006650	larsb	99	78.577	ENSMMOG00000013802	larsb	97	80.957	Mola_mola
ENSPKIG00000006650	larsb	99	71.949	ENSMODG00000010231	LARS	98	73.391	Monodelphis_domestica
ENSPKIG00000006650	larsb	99	80.659	ENSMALG00000018444	larsb	99	80.659	Monopterus_albus
ENSPKIG00000006650	larsb	99	76.311	MGP_CAROLIEiJ_G0022225	Lars	98	77.537	Mus_caroli
ENSPKIG00000006650	larsb	99	76.122	ENSMUSG00000024493	Lars	98	77.190	Mus_musculus
ENSPKIG00000006650	larsb	99	76.142	MGP_PahariEiJ_G0018958	Lars	98	77.363	Mus_pahari
ENSPKIG00000006650	larsb	99	76.311	MGP_SPRETEiJ_G0023135	Lars	98	77.450	Mus_spretus
ENSPKIG00000006650	larsb	99	77.627	ENSMPUG00000007844	LARS	98	79.080	Mustela_putorius_furo
ENSPKIG00000006650	larsb	99	76.545	ENSMLUG00000001125	LARS	100	76.545	Myotis_lucifugus
ENSPKIG00000006650	larsb	100	75.360	ENSNGAG00000011596	Lars	100	75.360	Nannospalax_galili
ENSPKIG00000006650	larsb	99	82.188	ENSNBRG00000005764	larsb	98	84.542	Neolamprologus_brichardi
ENSPKIG00000006650	larsb	100	76.799	ENSNLEG00000009816	LARS	100	76.799	Nomascus_leucogenys
ENSPKIG00000006650	larsb	50	80.000	ENSMEUG00000002332	-	58	77.992	Notamacropus_eugenii
ENSPKIG00000006650	larsb	79	82.447	ENSOPRG00000003076	LARS	83	82.447	Ochotona_princeps
ENSPKIG00000006650	larsb	99	73.729	ENSODEG00000004882	LARS	100	73.729	Octodon_degus
ENSPKIG00000006650	larsb	99	82.323	ENSONIG00000008493	larsb	98	84.888	Oreochromis_niloticus
ENSPKIG00000006650	larsb	99	74.199	ENSOANG00000005755	LARS	98	75.627	Ornithorhynchus_anatinus
ENSPKIG00000006650	larsb	99	77.881	ENSOCUG00000015684	LARS	98	79.253	Oryctolagus_cuniculus
ENSPKIG00000006650	larsb	99	80.892	ENSORLG00000001622	larsb	98	83.607	Oryzias_latipes
ENSPKIG00000006650	larsb	99	81.523	ENSORLG00020019950	larsb	98	84.183	Oryzias_latipes_hni
ENSPKIG00000006650	larsb	99	81.061	ENSORLG00015003895	larsb	98	83.693	Oryzias_latipes_hsok
ENSPKIG00000006650	larsb	99	81.313	ENSOMEG00000005677	larsb	99	84.111	Oryzias_melastigma
ENSPKIG00000006650	larsb	97	75.283	ENSOGAG00000008750	LARS	100	75.283	Otolemur_garnettii
ENSPKIG00000006650	larsb	99	76.780	ENSOARG00000015911	-	99	76.780	Ovis_aries
ENSPKIG00000006650	larsb	99	76.799	ENSOARG00000002454	-	100	76.799	Ovis_aries
ENSPKIG00000006650	larsb	99	77.288	ENSPPAG00000027964	LARS	99	77.288	Pan_paniscus
ENSPKIG00000006650	larsb	99	77.542	ENSPPRG00000023492	LARS	98	78.993	Panthera_pardus
ENSPKIG00000006650	larsb	99	77.542	ENSPTIG00000013110	LARS	98	78.993	Panthera_tigris_altaica
ENSPKIG00000006650	larsb	99	77.203	ENSPTRG00000017372	LARS	98	78.733	Pan_troglodytes
ENSPKIG00000006650	larsb	100	77.307	ENSPANG00000002663	LARS	100	77.307	Papio_anubis
ENSPKIG00000006650	larsb	99	77.542	ENSPSIG00000015641	LARS	100	77.542	Pelodiscus_sinensis
ENSPKIG00000006650	larsb	68	82.711	ENSPMGG00000019556	LARS	100	82.711	Periophthalmus_magnuspinnatus
ENSPKIG00000006650	larsb	99	73.012	ENSPEMG00000010933	Lars	98	74.154	Peromyscus_maniculatus_bairdii
ENSPKIG00000006650	larsb	51	58.814	ENSPMAG00000005301	larsb	95	63.066	Petromyzon_marinus
ENSPKIG00000006650	larsb	99	75.932	ENSPCIG00000030572	LARS	98	77.431	Phascolarctos_cinereus
ENSPKIG00000006650	larsb	99	81.566	ENSPFOG00000002361	larsb	98	84.629	Poecilia_formosa
ENSPKIG00000006650	larsb	99	81.566	ENSPLAG00000016550	larsb	98	84.629	Poecilia_latipinna
ENSPKIG00000006650	larsb	99	81.481	ENSPMEG00000018422	larsb	98	84.542	Poecilia_mexicana
ENSPKIG00000006650	larsb	99	81.481	ENSPREG00000005668	larsb	98	84.542	Poecilia_reticulata
ENSPKIG00000006650	larsb	99	76.531	ENSPPYG00000015908	LARS	97	77.041	Pongo_abelii
ENSPKIG00000006650	larsb	94	60.581	ENSPCAG00000005621	LARS	100	61.035	Procavia_capensis
ENSPKIG00000006650	larsb	99	77.466	ENSPCOG00000019325	LARS	99	77.466	Propithecus_coquereli
ENSPKIG00000006650	larsb	97	68.827	ENSPVAG00000011237	LARS	100	69.264	Pteropus_vampyrus
ENSPKIG00000006650	larsb	100	82.095	ENSPNYG00000015254	larsb	98	84.535	Pundamilia_nyererei
ENSPKIG00000006650	larsb	99	82.303	ENSPNAG00000027191	larsb	98	84.448	Pygocentrus_nattereri
ENSPKIG00000006650	larsb	99	76.227	ENSRNOG00000018304	Lars	98	77.450	Rattus_norvegicus
ENSPKIG00000006650	larsb	94	76.190	ENSRBIG00000043198	LARS	99	77.457	Rhinopithecus_bieti
ENSPKIG00000006650	larsb	90	44.173	YPL160W	CDC60	99	45.158	Saccharomyces_cerevisiae
ENSPKIG00000006650	larsb	100	75.618	ENSSBOG00000026661	LARS	100	77.948	Saimiri_boliviensis_boliviensis
ENSPKIG00000006650	larsb	99	77.307	ENSSHAG00000006084	LARS	98	78.838	Sarcophilus_harrisii
ENSPKIG00000006650	larsb	96	85.250	ENSSFOG00015018117	larsb	90	87.357	Scleropages_formosus
ENSPKIG00000006650	larsb	88	82.201	ENSSMAG00000004078	larsb	97	84.564	Scophthalmus_maximus
ENSPKIG00000006650	larsb	99	81.987	ENSSDUG00000021142	larsb	98	84.542	Seriola_dumerili
ENSPKIG00000006650	larsb	99	82.071	ENSSLDG00000007054	larsb	98	84.629	Seriola_lalandi_dorsalis
ENSPKIG00000006650	larsb	85	71.631	ENSSARG00000013481	LARS	83	77.778	Sorex_araneus
ENSPKIG00000006650	larsb	100	77.392	ENSSPUG00000013805	LARS	98	79.080	Sphenodon_punctatus
ENSPKIG00000006650	larsb	99	82.155	ENSSPAG00000012124	larsb	98	84.642	Stegastes_partitus
ENSPKIG00000006650	larsb	99	73.983	ENSSSCG00000014411	LARS	98	75.174	Sus_scrofa
ENSPKIG00000006650	larsb	99	77.627	ENSTGUG00000000092	-	98	79.460	Taeniopygia_guttata
ENSPKIG00000006650	larsb	99	79.798	ENSTRUG00000005358	larsb	98	82.455	Takifugu_rubripes
ENSPKIG00000006650	larsb	99	76.962	ENSTNIG00000018214	larsb	98	79.289	Tetraodon_nigroviridis
ENSPKIG00000006650	larsb	91	80.242	ENSTBEG00000003757	LARS	94	80.242	Tupaia_belangeri
ENSPKIG00000006650	larsb	97	74.912	ENSTTRG00000016712	LARS	96	74.912	Tursiops_truncatus
ENSPKIG00000006650	larsb	94	77.968	ENSUAMG00000019907	LARS	99	79.388	Ursus_americanus
ENSPKIG00000006650	larsb	99	77.458	ENSUMAG00000010585	LARS	98	78.906	Ursus_maritimus
ENSPKIG00000006650	larsb	92	75.876	ENSVPAG00000000557	LARS	92	75.876	Vicugna_pacos
ENSPKIG00000006650	larsb	99	77.627	ENSVVUG00000021124	LARS	98	79.167	Vulpes_vulpes
ENSPKIG00000006650	larsb	99	78.323	ENSXETG00000002320	lars	98	80.382	Xenopus_tropicalis
ENSPKIG00000006650	larsb	99	80.808	ENSXMAG00000001454	larsb	98	83.851	Xiphophorus_maculatus