EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006854 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 47755 bases
Position: chrPGUA01000251.1:156508-204262
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023119	Fox-1_C	PF12414.8	3.9e-40	1	1
ENSPKIP00000023095	Fox-1_C	PF12414.8	1.2e-35	1	1
ENSPKIP00000023095	RRM_1	PF00076.22	2.1e-17	1	1
ENSPKIP00000023119	RRM_1	PF00076.22	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003771	-	1557	-	ENSPKIP00000023095	518 (aa)	-	-
ENSPKIT00000003796	-	1215	-	ENSPKIP00000023119	404 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006854's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006854's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006854	-	77	52.778	ENSPKIG00000022633	-	71	60.000
ENSPKIG00000006854	-	67	64.338	ENSPKIG00000010299	rbfox3a	68	64.576
ENSPKIG00000006854	-	84	50.130	ENSPKIG00000009667	-	83	59.150
ENSPKIG00000006854	-	58	54.851	ENSPKIG00000012029	rbfox1l	68	54.196
ENSPKIG00000006854	-	66	45.513	ENSPKIG00000019353	rbfox1	86	56.537
ENSPKIG00000006854	-	56	60.777	ENSPKIG00000010816	-	78	55.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006854	-	74	56.906	ENSG00000100320	RBFOX2	89	59.641	Homo_sapiens
ENSPKIG00000006854	-	100	68.597	ENSAPOG00000021561	-	100	69.027	Acanthochromis_polyacanthus
ENSPKIG00000006854	-	100	66.091	ENSAPOG00000004877	rbfox2	100	66.307	Acanthochromis_polyacanthus
ENSPKIG00000006854	-	62	61.076	ENSAMEG00000007228	RBFOX2	99	60.317	Ailuropoda_melanoleuca
ENSPKIG00000006854	-	100	65.443	ENSAOCG00000013752	rbfox2	100	66.091	Amphiprion_ocellaris
ENSPKIG00000006854	-	100	66.167	ENSAOCG00000015358	-	100	67.021	Amphiprion_ocellaris
ENSPKIG00000006854	-	100	65.443	ENSAPEG00000022359	rbfox2	100	66.307	Amphiprion_percula
ENSPKIG00000006854	-	100	66.167	ENSAPEG00000013905	-	100	67.021	Amphiprion_percula
ENSPKIG00000006854	-	100	66.295	ENSATEG00000009959	-	100	67.035	Anabas_testudineus
ENSPKIG00000006854	-	100	63.420	ENSATEG00000021951	rbfox2	100	65.011	Anabas_testudineus
ENSPKIG00000006854	-	73	56.620	ENSAPLG00000007609	RBFOX2	99	52.618	Anas_platyrhynchos
ENSPKIG00000006854	-	74	57.459	ENSACAG00000016535	RBFOX2	73	57.183	Anolis_carolinensis
ENSPKIG00000006854	-	62	61.538	ENSANAG00000015245	RBFOX2	97	61.093	Aotus_nancymaae
ENSPKIG00000006854	-	100	66.889	ENSACLG00000017380	-	96	71.824	Astatotilapia_calliptera
ENSPKIG00000006854	-	100	65.152	ENSACLG00000009744	rbfox2	100	66.307	Astatotilapia_calliptera
ENSPKIG00000006854	-	100	68.386	ENSAMXG00000011451	rbfox2	100	68.080	Astyanax_mexicanus
ENSPKIG00000006854	-	74	56.164	ENSBTAG00000020125	RBFOX2	88	55.866	Bos_taurus
ENSPKIG00000006854	-	73	56.011	ENSCJAG00000019456	-	91	54.787	Callithrix_jacchus
ENSPKIG00000006854	-	73	56.077	ENSCJAG00000038886	-	88	55.108	Callithrix_jacchus
ENSPKIG00000006854	-	74	56.906	ENSCAFG00000001701	RBFOX2	86	56.901	Canis_familiaris
ENSPKIG00000006854	-	73	48.864	ENSCAFG00020004541	RBFOX2	73	51.118	Canis_lupus_dingo
ENSPKIG00000006854	-	74	56.557	ENSCHIG00000014027	RBFOX2	87	54.366	Capra_hircus
ENSPKIG00000006854	-	80	54.613	ENSTSYG00000014123	RBFOX2	86	56.901	Carlito_syrichta
ENSPKIG00000006854	-	71	55.864	ENSCAPG00000014308	RBFOX2	75	59.655	Cavia_aperea
ENSPKIG00000006854	-	73	57.746	ENSCPOG00000022180	RBFOX2	85	57.183	Cavia_porcellus
ENSPKIG00000006854	-	73	56.131	ENSCCAG00000036584	RBFOX2	91	55.376	Cebus_capucinus
ENSPKIG00000006854	-	74	56.906	ENSCATG00000038655	RBFOX2	91	53.955	Cercocebus_atys
ENSPKIG00000006854	-	73	55.211	ENSCLAG00000017106	RBFOX2	98	51.750	Chinchilla_lanigera
ENSPKIG00000006854	-	56	48.173	ENSCSAG00000008110	RBFOX2	76	56.478	Chlorocebus_sabaeus
ENSPKIG00000006854	-	55	50.174	ENSCHOG00000002887	RBFOX2	90	58.537	Choloepus_hoffmanni
ENSPKIG00000006854	-	74	56.630	ENSCPBG00000023144	RBFOX2	91	56.620	Chrysemys_picta_bellii
ENSPKIG00000006854	-	74	56.906	ENSCANG00000035832	RBFOX2	91	56.620	Colobus_angolensis_palliatus
ENSPKIG00000006854	-	74	56.354	ENSCGRG00001017727	Rbfox2	87	56.338	Cricetulus_griseus_chok1gshd
ENSPKIG00000006854	-	73	56.546	ENSCGRG00000014237	Rbfox2	87	55.710	Cricetulus_griseus_crigri
ENSPKIG00000006854	-	100	65.733	ENSCSEG00000007360	-	100	66.595	Cynoglossus_semilaevis
ENSPKIG00000006854	-	100	60.612	ENSCSEG00000007748	rbfox2	100	61.224	Cynoglossus_semilaevis
ENSPKIG00000006854	-	80	55.795	ENSCVAG00000016503	-	98	57.412	Cyprinodon_variegatus
ENSPKIG00000006854	-	51	69.421	ENSDARG00000052182	rbfox2	100	68.182	Danio_rerio
ENSPKIG00000006854	-	73	57.746	ENSDNOG00000004372	RBFOX2	82	57.183	Dasypus_novemcinctus
ENSPKIG00000006854	-	73	52.958	ENSDORG00000015003	Rbfox2	91	52.394	Dipodomys_ordii
ENSPKIG00000006854	-	61	79.710	ENSETEG00000005638	RBFOX2	59	77.536	Echinops_telfairi
ENSPKIG00000006854	-	73	57.465	ENSEASG00005018920	RBFOX2	73	56.901	Equus_asinus_asinus
ENSPKIG00000006854	-	73	57.465	ENSECAG00000018923	RBFOX2	73	56.901	Equus_caballus
ENSPKIG00000006854	-	69	51.014	ENSEEUG00000004549	RBFOX2	78	54.688	Erinaceus_europaeus
ENSPKIG00000006854	-	51	66.109	ENSELUG00000000102	rbfox2	100	64.854	Esox_lucius
ENSPKIG00000006854	-	100	66.736	ENSELUG00000009404	-	100	66.042	Esox_lucius
ENSPKIG00000006854	-	73	56.825	ENSFCAG00000010061	RBFOX2	86	55.490	Felis_catus
ENSPKIG00000006854	-	74	56.630	ENSFALG00000013111	RBFOX2	85	56.620	Ficedula_albicollis
ENSPKIG00000006854	-	56	42.808	ENSFDAG00000006204	RBFOX2	55	63.500	Fukomys_damarensis
ENSPKIG00000006854	-	100	64.795	ENSFHEG00000010546	rbfox2	100	65.517	Fundulus_heteroclitus
ENSPKIG00000006854	-	79	53.806	ENSGMOG00000005278	rbfox2	97	54.211	Gadus_morhua
ENSPKIG00000006854	-	53	47.273	ENSGALG00000012540	RBFOX2	68	56.364	Gallus_gallus
ENSPKIG00000006854	-	55	62.174	ENSGAFG00000017428	-	96	64.502	Gambusia_affinis
ENSPKIG00000006854	-	79	58.056	ENSGACG00000015968	rbfox2	98	59.363	Gasterosteus_aculeatus
ENSPKIG00000006854	-	81	52.723	ENSGACG00000007174	-	99	55.556	Gasterosteus_aculeatus
ENSPKIG00000006854	-	74	56.630	ENSGAGG00000025884	RBFOX2	86	56.620	Gopherus_agassizii
ENSPKIG00000006854	-	74	56.906	ENSGGOG00000037332	RBFOX2	91	53.955	Gorilla_gorilla
ENSPKIG00000006854	-	100	65.152	ENSHBUG00000004356	rbfox2	100	66.307	Haplochromis_burtoni
ENSPKIG00000006854	-	100	65.033	ENSHBUG00000000856	-	96	69.907	Haplochromis_burtoni
ENSPKIG00000006854	-	73	58.028	ENSHGLG00000012907	RBFOX2	98	54.637	Heterocephalus_glaber_female
ENSPKIG00000006854	-	73	57.382	ENSHGLG00100009986	RBFOX2	98	53.846	Heterocephalus_glaber_male
ENSPKIG00000006854	-	100	63.283	ENSHCOG00000016102	rbfox2	100	64.286	Hippocampus_comes
ENSPKIG00000006854	-	100	63.966	ENSHCOG00000005662	-	100	63.812	Hippocampus_comes
ENSPKIG00000006854	-	100	61.638	ENSIPUG00000016896	rbfox2	94	73.519	Ictalurus_punctatus
ENSPKIG00000006854	-	73	54.366	ENSSTOG00000014841	RBFOX2	87	53.803	Ictidomys_tridecemlineatus
ENSPKIG00000006854	-	73	54.085	ENSJJAG00000014885	Rbfox2	86	53.239	Jaculus_jaculus
ENSPKIG00000006854	-	100	62.900	ENSKMAG00000013354	-	88	88.136	Kryptolebias_marmoratus
ENSPKIG00000006854	-	100	65.000	ENSKMAG00000021880	-	100	65.944	Kryptolebias_marmoratus
ENSPKIG00000006854	-	79	49.875	ENSLACG00000003339	RBFOX2	98	49.127	Latimeria_chalumnae
ENSPKIG00000006854	-	73	55.432	ENSLAFG00000027140	RBFOX2	89	54.596	Loxodonta_africana
ENSPKIG00000006854	-	74	56.906	ENSMFAG00000031994	RBFOX2	91	53.955	Macaca_fascicularis
ENSPKIG00000006854	-	74	56.906	ENSMMUG00000014010	RBFOX2	91	56.620	Macaca_mulatta
ENSPKIG00000006854	-	74	56.906	ENSMNEG00000034388	RBFOX2	91	53.955	Macaca_nemestrina
ENSPKIG00000006854	-	74	56.906	ENSMLEG00000005854	RBFOX2	91	53.955	Mandrillus_leucophaeus
ENSPKIG00000006854	-	100	65.256	ENSMAMG00000008980	-	100	67.920	Mastacembelus_armatus
ENSPKIG00000006854	-	100	65.517	ENSMAMG00000004293	rbfox2	100	65.948	Mastacembelus_armatus
ENSPKIG00000006854	-	100	64.889	ENSMZEG00005004959	-	96	69.746	Maylandia_zebra
ENSPKIG00000006854	-	100	63.341	ENSMZEG00005023838	rbfox2	100	64.502	Maylandia_zebra
ENSPKIG00000006854	-	80	51.870	ENSMAUG00000018816	Rbfox2	87	53.803	Mesocricetus_auratus
ENSPKIG00000006854	-	74	56.557	ENSMICG00000035417	RBFOX2	87	56.267	Microcebus_murinus
ENSPKIG00000006854	-	60	50.000	ENSMICG00000046341	-	65	53.689	Microcebus_murinus
ENSPKIG00000006854	-	73	54.648	ENSMOCG00000009327	Rbfox2	87	54.085	Microtus_ochrogaster
ENSPKIG00000006854	-	74	48.942	ENSMMOG00000008287	rbfox2	99	80.769	Mola_mola
ENSPKIG00000006854	-	73	54.521	ENSMODG00000001122	RBFOX2	83	57.817	Monodelphis_domestica
ENSPKIG00000006854	-	51	74.477	ENSMALG00000000623	rbfox2	100	73.950	Monopterus_albus
ENSPKIG00000006854	-	73	56.901	MGP_CAROLIEiJ_G0019957	Rbfox2	97	49.359	Mus_caroli
ENSPKIG00000006854	-	73	59.877	ENSMUSG00000033565	Rbfox2	97	48.941	Mus_musculus
ENSPKIG00000006854	-	73	56.901	MGP_PahariEiJ_G0019967	Rbfox2	86	56.338	Mus_pahari
ENSPKIG00000006854	-	73	56.901	MGP_SPRETEiJ_G0020860	Rbfox2	97	49.359	Mus_spretus
ENSPKIG00000006854	-	73	56.825	ENSMPUG00000012555	RBFOX2	82	55.989	Mustela_putorius_furo
ENSPKIG00000006854	-	73	56.077	ENSMLUG00000002676	RBFOX2	83	55.249	Myotis_lucifugus
ENSPKIG00000006854	-	74	54.420	ENSNGAG00000020528	Rbfox2	87	54.062	Nannospalax_galili
ENSPKIG00000006854	-	100	65.227	ENSNBRG00000018155	rbfox2	100	66.091	Neolamprologus_brichardi
ENSPKIG00000006854	-	83	64.031	ENSNBRG00000001568	-	90	72.959	Neolamprologus_brichardi
ENSPKIG00000006854	-	73	56.131	ENSNLEG00000034979	RBFOX2	96	50.806	Nomascus_leucogenys
ENSPKIG00000006854	-	73	53.005	ENSMEUG00000001547	RBFOX2	94	52.186	Notamacropus_eugenii
ENSPKIG00000006854	-	73	48.907	ENSOPRG00000014878	RBFOX2	57	84.270	Ochotona_princeps
ENSPKIG00000006854	-	73	56.117	ENSODEG00000009937	RBFOX2	91	53.495	Octodon_degus
ENSPKIG00000006854	-	79	56.171	ENSONIG00000008341	-	96	58.647	Oreochromis_niloticus
ENSPKIG00000006854	-	79	59.950	ENSONIG00000017998	rbfox2	96	61.713	Oreochromis_niloticus
ENSPKIG00000006854	-	50	58.904	ENSOANG00000007489	RBFOX2	83	59.298	Ornithorhynchus_anatinus
ENSPKIG00000006854	-	73	54.017	ENSOCUG00000001349	RBFOX2	82	53.221	Oryctolagus_cuniculus
ENSPKIG00000006854	-	100	65.451	ENSORLG00000014948	-	100	66.311	Oryzias_latipes
ENSPKIG00000006854	-	100	64.363	ENSORLG00000028082	rbfox2	100	64.208	Oryzias_latipes
ENSPKIG00000006854	-	100	64.363	ENSORLG00020008976	rbfox2	100	64.208	Oryzias_latipes_hni
ENSPKIG00000006854	-	100	65.236	ENSORLG00020005676	-	100	66.098	Oryzias_latipes_hni
ENSPKIG00000006854	-	100	64.363	ENSORLG00015007027	rbfox2	100	64.208	Oryzias_latipes_hsok
ENSPKIG00000006854	-	100	65.451	ENSORLG00015000797	-	100	66.311	Oryzias_latipes_hsok
ENSPKIG00000006854	-	100	65.953	ENSOMEG00000007909	-	100	66.808	Oryzias_melastigma
ENSPKIG00000006854	-	100	65.733	ENSOMEG00000015966	rbfox2	100	65.443	Oryzias_melastigma
ENSPKIG00000006854	-	73	57.103	ENSOGAG00000033250	RBFOX2	88	56.267	Otolemur_garnettii
ENSPKIG00000006854	-	74	55.068	ENSOARG00000018669	RBFOX2	87	54.749	Ovis_aries
ENSPKIG00000006854	-	74	56.906	ENSPPAG00000035653	RBFOX2	91	53.955	Pan_paniscus
ENSPKIG00000006854	-	74	56.630	ENSPPRG00000015635	RBFOX2	91	56.620	Panthera_pardus
ENSPKIG00000006854	-	74	56.284	ENSPTIG00000019147	RBFOX2	88	55.989	Panthera_tigris_altaica
ENSPKIG00000006854	-	74	56.906	ENSPTRG00000014305	RBFOX2	91	53.955	Pan_troglodytes
ENSPKIG00000006854	-	73	55.795	ENSPANG00000007030	RBFOX2	91	54.441	Papio_anubis
ENSPKIG00000006854	-	74	56.906	ENSPSIG00000017828	RBFOX2	86	56.338	Pelodiscus_sinensis
ENSPKIG00000006854	-	54	74.737	ENSPMGG00000016969	-	87	75.694	Periophthalmus_magnuspinnatus
ENSPKIG00000006854	-	51	70.588	ENSPMGG00000007138	rbfox2	100	72.574	Periophthalmus_magnuspinnatus
ENSPKIG00000006854	-	73	54.648	ENSPEMG00000012542	Rbfox2	87	54.085	Peromyscus_maniculatus_bairdii
ENSPKIG00000006854	-	74	55.923	ENSPCIG00000021550	RBFOX2	85	59.509	Phascolarctos_cinereus
ENSPKIG00000006854	-	100	65.659	ENSPFOG00000014209	rbfox2	100	66.091	Poecilia_formosa
ENSPKIG00000006854	-	70	66.358	ENSPFOG00000001869	-	100	67.278	Poecilia_formosa
ENSPKIG00000006854	-	50	72.034	ENSPLAG00000017308	rbfox2	99	71.489	Poecilia_latipinna
ENSPKIG00000006854	-	51	71.369	ENSPLAG00000002710	-	100	72.951	Poecilia_latipinna
ENSPKIG00000006854	-	51	73.640	ENSPMEG00000007320	rbfox2	100	73.109	Poecilia_mexicana
ENSPKIG00000006854	-	51	72.314	ENSPMEG00000013663	-	100	72.653	Poecilia_mexicana
ENSPKIG00000006854	-	51	70.293	ENSPREG00000012955	rbfox2	100	71.008	Poecilia_reticulata
ENSPKIG00000006854	-	73	56.825	ENSPPYG00000011766	RBFOX2	73	55.989	Pongo_abelii
ENSPKIG00000006854	-	74	56.268	ENSPCOG00000016273	RBFOX2	87	55.952	Propithecus_coquereli
ENSPKIG00000006854	-	50	59.328	ENSPVAG00000015844	RBFOX2	66	58.582	Pteropus_vampyrus
ENSPKIG00000006854	-	100	65.227	ENSPNYG00000016161	rbfox2	100	66.523	Pundamilia_nyererei
ENSPKIG00000006854	-	100	65.236	ENSPNYG00000020595	-	96	69.710	Pundamilia_nyererei
ENSPKIG00000006854	-	100	70.698	ENSPNAG00000000168	rbfox2	100	70.233	Pygocentrus_nattereri
ENSPKIG00000006854	-	99	59.545	ENSPNAG00000014196	-	100	57.273	Pygocentrus_nattereri
ENSPKIG00000006854	-	90	50.661	ENSRNOG00000004688	Rbfox2	97	49.891	Rattus_norvegicus
ENSPKIG00000006854	-	74	56.906	ENSRBIG00000033696	RBFOX2	91	53.955	Rhinopithecus_bieti
ENSPKIG00000006854	-	74	56.906	ENSRROG00000035715	RBFOX2	96	52.128	Rhinopithecus_roxellana
ENSPKIG00000006854	-	73	56.354	ENSSBOG00000028291	RBFOX2	92	55.376	Saimiri_boliviensis_boliviensis
ENSPKIG00000006854	-	73	56.198	ENSSHAG00000006835	RBFOX2	77	59.816	Sarcophilus_harrisii
ENSPKIG00000006854	-	100	65.702	ENSSFOG00015010482	-	97	69.505	Scleropages_formosus
ENSPKIG00000006854	-	100	62.076	ENSSMAG00000004317	-	100	63.347	Scophthalmus_maximus
ENSPKIG00000006854	-	100	63.853	ENSSMAG00000013662	rbfox2	100	64.286	Scophthalmus_maximus
ENSPKIG00000006854	-	100	65.236	ENSSDUG00000009511	-	100	67.591	Seriola_dumerili
ENSPKIG00000006854	-	100	66.234	ENSSDUG00000004292	rbfox2	100	66.955	Seriola_dumerili
ENSPKIG00000006854	-	100	66.094	ENSSLDG00000018052	-	100	67.591	Seriola_lalandi_dorsalis
ENSPKIG00000006854	-	83	62.404	ENSSLDG00000023983	rbfox2	83	70.738	Seriola_lalandi_dorsalis
ENSPKIG00000006854	-	52	48.339	ENSSPUG00000011797	RBFOX2	69	56.827	Sphenodon_punctatus
ENSPKIG00000006854	-	100	65.227	ENSSPAG00000013681	rbfox2	100	66.307	Stegastes_partitus
ENSPKIG00000006854	-	100	66.309	ENSSPAG00000016272	-	100	68.017	Stegastes_partitus
ENSPKIG00000006854	-	73	60.870	ENSSSCG00000000152	RBFOX2	90	60.000	Sus_scrofa
ENSPKIG00000006854	-	74	56.630	ENSTGUG00000010808	RBFOX2	82	60.308	Taeniopygia_guttata
ENSPKIG00000006854	-	79	54.111	ENSTRUG00000007739	-	95	51.330	Takifugu_rubripes
ENSPKIG00000006854	-	55	80.000	ENSTBEG00000003297	-	62	78.519	Tupaia_belangeri
ENSPKIG00000006854	-	73	57.382	ENSTTRG00000006922	RBFOX2	89	56.267	Tursiops_truncatus
ENSPKIG00000006854	-	71	54.930	ENSUAMG00000010612	RBFOX2	76	60.312	Ursus_americanus
ENSPKIG00000006854	-	55	50.526	ENSUMAG00000016785	RBFOX2	70	58.596	Ursus_maritimus
ENSPKIG00000006854	-	73	51.811	ENSVPAG00000002824	RBFOX2	89	51.253	Vicugna_pacos
ENSPKIG00000006854	-	73	62.963	ENSVVUG00000023561	RBFOX2	88	56.267	Vulpes_vulpes
ENSPKIG00000006854	-	73	55.769	ENSXETG00000000231	rbfox2	92	55.220	Xenopus_tropicalis
ENSPKIG00000006854	-	58	88.636	ENSXCOG00000015905	-	98	51.811	Xiphophorus_couchianus
ENSPKIG00000006854	-	79	67.500	ENSXMAG00000029498	rbfox2	90	68.056	Xiphophorus_maculatus
ENSPKIG00000006854	-	100	63.578	ENSXMAG00000026769	-	100	65.310	Xiphophorus_maculatus