EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006917 (Gene tree)
Gene ID: 111837706
Gene Symbol: -
Alias: -
Full Name: apoptotic chromatin condensation inducer in the nucleus-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 27268 bases
Position: chrPGUA01000062.1:2543972-2571239
Accession: 111837706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023203	SAP	PF02037.27	1.1e-08	1	1
ENSPKIP00000023237	SAP	PF02037.27	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003973	-	1881	-	ENSPKIP00000023293	626 (aa)	-	-
ENSPKIT00000003997	-	2284	-	ENSPKIP00000023316	588 (aa)	-	-
ENSPKIT00000003916	-	4320	XM_023799993	ENSPKIP00000023237	1439 (aa)	XP_023655761	UPI000CD6463E
ENSPKIT00000003946	-	4215	-	ENSPKIP00000023267	1404 (aa)	XP_023655762	UPI000CD66F8B
ENSPKIT00000003882	-	4269	-	ENSPKIP00000023203	1422 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000006917's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006917	-	66	67.465	ENSPKIG00000009246	-	63	57.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006917	-	72	58.308	ENSAPOG00000019226	acin1b	61	63.946	Acanthochromis_polyacanthus
ENSPKIG00000006917	-	73	58.499	ENSAOCG00000018649	acin1b	51	65.986	Amphiprion_ocellaris
ENSPKIG00000006917	-	60	62.384	ENSATEG00000001677	acin1b	89	58.087	Anabas_testudineus
ENSPKIG00000006917	-	54	73.759	ENSACLG00000019938	-	50	73.759	Astatotilapia_calliptera
ENSPKIG00000006917	-	63	59.465	ENSACLG00000011103	acin1b	53	85.556	Astatotilapia_calliptera
ENSPKIG00000006917	-	67	56.174	ENSCSEG00000004364	acin1b	73	52.042	Cynoglossus_semilaevis
ENSPKIG00000006917	-	68	58.974	ENSCVAG00000009841	acin1b	58	84.043	Cyprinodon_variegatus
ENSPKIG00000006917	-	75	52.888	ENSDARG00000026842	acin1b	53	81.600	Danio_rerio
ENSPKIG00000006917	-	71	57.705	ENSGAFG00000003479	acin1b	69	60.775	Gambusia_affinis
ENSPKIG00000006917	-	61	64.889	ENSHBUG00000020274	acin1b	68	60.000	Haplochromis_burtoni
ENSPKIG00000006917	-	71	56.070	ENSHCOG00000000814	acin1b	73	81.915	Hippocampus_comes
ENSPKIG00000006917	-	62	63.355	ENSIPUG00000006269	acin1b	76	92.453	Ictalurus_punctatus
ENSPKIG00000006917	-	53	61.993	ENSMAMG00000015673	acin1b	86	61.455	Mastacembelus_armatus
ENSPKIG00000006917	-	54	73.759	ENSMZEG00005012139	-	50	73.759	Maylandia_zebra
ENSPKIG00000006917	-	68	59.696	ENSORLG00000007365	acin1b	63	86.667	Oryzias_latipes
ENSPKIG00000006917	-	68	59.296	ENSORLG00020007510	acin1b	63	86.667	Oryzias_latipes_hni
ENSPKIG00000006917	-	67	61.152	ENSOMEG00000015053	acin1b	63	85.556	Oryzias_melastigma
ENSPKIG00000006917	-	55	63.158	ENSPFOG00000009202	acin1b	86	60.247	Poecilia_formosa
ENSPKIG00000006917	-	55	63.158	ENSPLAG00000021380	acin1b	86	60.154	Poecilia_latipinna
ENSPKIG00000006917	-	55	63.435	ENSPMEG00000000313	acin1b	86	60.587	Poecilia_mexicana
ENSPKIG00000006917	-	55	63.333	ENSPREG00000004790	acin1b	86	60.903	Poecilia_reticulata
ENSPKIG00000006917	-	61	64.944	ENSPNYG00000005309	acin1b	67	60.000	Pundamilia_nyererei
ENSPKIG00000006917	-	53	81.452	ENSPNAG00000021539	acin1a	51	81.452	Pygocentrus_nattereri
ENSPKIG00000006917	-	63	58.418	ENSPNAG00000022123	acin1b	78	60.331	Pygocentrus_nattereri
ENSPKIG00000006917	-	96	60.381	ENSSFOG00015006344	acin1b	98	59.812	Scleropages_formosus
ENSPKIG00000006917	-	65	62.888	ENSSMAG00000005897	acin1b	88	58.475	Scophthalmus_maximus
ENSPKIG00000006917	-	58	60.190	ENSSDUG00000006437	acin1b	89	59.695	Seriola_dumerili
ENSPKIG00000006917	-	64	75.887	ENSSPAG00000023019	-	55	75.887	Stegastes_partitus
ENSPKIG00000006917	-	61	62.079	ENSTRUG00000008622	acin1b	89	58.172	Takifugu_rubripes
ENSPKIG00000006917	-	50	62.939	ENSXCOG00000000454	acin1b	86	59.768	Xiphophorus_couchianus
ENSPKIG00000006917	-	53	63.158	ENSXMAG00000001598	acin1b	63	62.148	Xiphophorus_maculatus