EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000006933 (Gene tree)
Gene ID: 111850135
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 12572 bases
Position: chrPGUA01000021.1:1986199-1998770
Accession: 111850135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023245	zf-RanBP	PF00641.18	5.1e-07	1	1
ENSPKIP00000023226	zf-RanBP	PF00641.18	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000003905	-	5287	-	ENSPKIP00000023226	716 (aa)	-	-
ENSPKIT00000003924	-	4964	-	ENSPKIP00000023245	698 (aa)	XP_023679490	UPI000CD5CF96

Gene Model

Click here to download ENSPKIG00000006933's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04217	Necroptosis	KEGG
pki04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000006933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000006933	shrprbck1r	65	70.460	ENSPKIG00000018308	-	96	70.460

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000006933	shrprbck1r	59	66.110	ENSAPOG00000023352	sharpin	95	65.385	Acanthochromis_polyacanthus
ENSPKIG00000006933	shrprbck1r	100	72.943	ENSAPOG00000022737	shrprbck1r	100	72.664	Acanthochromis_polyacanthus
ENSPKIG00000006933	shrprbck1r	100	71.866	ENSACIG00000002184	shrprbck1r	100	71.866	Amphilophus_citrinellus
ENSPKIG00000006933	shrprbck1r	100	73.640	ENSAOCG00000002890	shrprbck1r	100	73.501	Amphiprion_ocellaris
ENSPKIG00000006933	shrprbck1r	59	66.351	ENSAOCG00000017464	sharpin	95	66.348	Amphiprion_ocellaris
ENSPKIG00000006933	shrprbck1r	100	71.827	ENSAPEG00000023274	shrprbck1r	100	71.688	Amphiprion_percula
ENSPKIG00000006933	shrprbck1r	59	66.351	ENSAPEG00000004049	sharpin	95	66.348	Amphiprion_percula
ENSPKIG00000006933	shrprbck1r	100	70.153	ENSATEG00000014561	shrprbck1r	100	70.153	Anabas_testudineus
ENSPKIG00000006933	shrprbck1r	59	66.190	ENSATEG00000007832	sharpin	87	66.187	Anabas_testudineus
ENSPKIG00000006933	shrprbck1r	100	73.259	ENSACLG00000022609	shrprbck1r	100	73.259	Astatotilapia_calliptera
ENSPKIG00000006933	shrprbck1r	100	74.759	ENSAMXG00000021016	shrprbck1r	100	74.759	Astyanax_mexicanus
ENSPKIG00000006933	shrprbck1r	54	61.735	ENSAMXG00000006229	sharpin	97	61.735	Astyanax_mexicanus
ENSPKIG00000006933	shrprbck1r	100	68.150	ENSCSEG00000011306	shrprbck1r	100	67.872	Cynoglossus_semilaevis
ENSPKIG00000006933	shrprbck1r	100	71.569	ENSCVAG00000007250	shrprbck1r	100	71.429	Cyprinodon_variegatus
ENSPKIG00000006933	shrprbck1r	59	62.411	ENSCVAG00000006586	sharpin	94	61.611	Cyprinodon_variegatus
ENSPKIG00000006933	shrprbck1r	100	75.350	ENSDARG00000059871	shrprbck1r	100	75.350	Danio_rerio
ENSPKIG00000006933	shrprbck1r	55	58.942	ENSDARG00000076995	sharpin	95	59.391	Danio_rerio
ENSPKIG00000006933	shrprbck1r	100	76.748	ENSELUG00000016022	shrprbck1r	100	76.462	Esox_lucius
ENSPKIG00000006933	shrprbck1r	59	62.919	ENSFHEG00000013564	sharpin	94	61.962	Fundulus_heteroclitus
ENSPKIG00000006933	shrprbck1r	100	69.048	ENSGAFG00000009309	shrprbck1r	100	68.768	Gambusia_affinis
ENSPKIG00000006933	shrprbck1r	59	48.926	ENSGAFG00000021405	sharpin	95	48.449	Gambusia_affinis
ENSPKIG00000006933	shrprbck1r	76	71.107	ENSGACG00000002544	shrprbck1r	99	71.107	Gasterosteus_aculeatus
ENSPKIG00000006933	shrprbck1r	100	73.398	ENSHBUG00000021933	shrprbck1r	100	73.120	Haplochromis_burtoni
ENSPKIG00000006933	shrprbck1r	59	61.707	ENSHCOG00000018847	sharpin	79	62.019	Hippocampus_comes
ENSPKIG00000006933	shrprbck1r	97	72.993	ENSIPUG00000014247	shrprbck1r	96	72.993	Ictalurus_punctatus
ENSPKIG00000006933	shrprbck1r	55	59.640	ENSIPUG00000011951	sharpin	100	59.640	Ictalurus_punctatus
ENSPKIG00000006933	shrprbck1r	59	65.632	ENSKMAG00000015204	sharpin	76	64.678	Kryptolebias_marmoratus
ENSPKIG00000006933	shrprbck1r	100	70.776	ENSKMAG00000015215	shrprbck1r	100	70.055	Kryptolebias_marmoratus
ENSPKIG00000006933	shrprbck1r	100	71.827	ENSLBEG00000016876	shrprbck1r	100	72.106	Labrus_bergylta
ENSPKIG00000006933	shrprbck1r	59	67.703	ENSLBEG00000016624	sharpin	95	67.703	Labrus_bergylta
ENSPKIG00000006933	shrprbck1r	95	55.786	ENSLACG00000010948	-	96	55.786	Latimeria_chalumnae
ENSPKIG00000006933	shrprbck1r	100	77.574	ENSLOCG00000008910	shrprbck1r	100	77.856	Lepisosteus_oculatus
ENSPKIG00000006933	shrprbck1r	51	64.516	ENSMAMG00000014645	sharpin	95	64.516	Mastacembelus_armatus
ENSPKIG00000006933	shrprbck1r	100	69.874	ENSMAMG00000022930	shrprbck1r	100	69.874	Mastacembelus_armatus
ENSPKIG00000006933	shrprbck1r	100	73.120	ENSMZEG00005021257	shrprbck1r	100	73.120	Maylandia_zebra
ENSPKIG00000006933	shrprbck1r	100	68.698	ENSMMOG00000003764	shrprbck1r	100	68.698	Mola_mola
ENSPKIG00000006933	shrprbck1r	96	72.807	ENSMALG00000008861	shrprbck1r	95	72.807	Monopterus_albus
ENSPKIG00000006933	shrprbck1r	51	64.516	ENSMALG00000020528	sharpin	95	64.516	Monopterus_albus
ENSPKIG00000006933	shrprbck1r	100	72.841	ENSNBRG00000002270	shrprbck1r	100	72.841	Neolamprologus_brichardi
ENSPKIG00000006933	shrprbck1r	100	72.563	ENSONIG00000014401	shrprbck1r	100	72.423	Oreochromis_niloticus
ENSPKIG00000006933	shrprbck1r	55	61.940	ENSONIG00000009626	-	97	61.940	Oreochromis_niloticus
ENSPKIG00000006933	shrprbck1r	100	69.274	ENSORLG00000007392	shrprbck1r	100	69.134	Oryzias_latipes
ENSPKIG00000006933	shrprbck1r	59	62.884	ENSORLG00000017281	sharpin	95	62.884	Oryzias_latipes
ENSPKIG00000006933	shrprbck1r	61	62.385	ENSORLG00020000801	sharpin	98	62.385	Oryzias_latipes_hni
ENSPKIG00000006933	shrprbck1r	100	69.735	ENSORLG00020018619	shrprbck1r	100	69.596	Oryzias_latipes_hni
ENSPKIG00000006933	shrprbck1r	59	63.033	ENSORLG00015009860	sharpin	95	63.033	Oryzias_latipes_hsok
ENSPKIG00000006933	shrprbck1r	100	68.759	ENSORLG00015018865	shrprbck1r	100	68.619	Oryzias_latipes_hsok
ENSPKIG00000006933	shrprbck1r	59	50.122	ENSOMEG00000005729	sharpin	88	50.122	Oryzias_melastigma
ENSPKIG00000006933	shrprbck1r	100	70.432	ENSOMEG00000012749	shrprbck1r	100	70.432	Oryzias_melastigma
ENSPKIG00000006933	shrprbck1r	100	69.886	ENSPMGG00000013254	shrprbck1r	100	69.744	Periophthalmus_magnuspinnatus
ENSPKIG00000006933	shrprbck1r	100	70.308	ENSPFOG00000004214	shrprbck1r	100	70.308	Poecilia_formosa
ENSPKIG00000006933	shrprbck1r	59	63.309	ENSPFOG00000015253	sharpin	94	62.590	Poecilia_formosa
ENSPKIG00000006933	shrprbck1r	59	63.309	ENSPLAG00000000423	sharpin	94	62.590	Poecilia_latipinna
ENSPKIG00000006933	shrprbck1r	100	70.308	ENSPLAG00000020523	shrprbck1r	100	70.308	Poecilia_latipinna
ENSPKIG00000006933	shrprbck1r	100	69.930	ENSPMEG00000006877	shrprbck1r	100	69.930	Poecilia_mexicana
ENSPKIG00000006933	shrprbck1r	59	44.417	ENSPMEG00000023030	sharpin	88	43.309	Poecilia_mexicana
ENSPKIG00000006933	shrprbck1r	100	69.510	ENSPREG00000014689	shrprbck1r	100	69.510	Poecilia_reticulata
ENSPKIG00000006933	shrprbck1r	59	63.549	ENSPREG00000009702	sharpin	94	62.830	Poecilia_reticulata
ENSPKIG00000006933	shrprbck1r	100	73.259	ENSPNYG00000022601	shrprbck1r	100	73.259	Pundamilia_nyererei
ENSPKIG00000006933	shrprbck1r	100	72.992	ENSPNAG00000007847	shrprbck1r	100	72.992	Pygocentrus_nattereri
ENSPKIG00000006933	shrprbck1r	54	58.869	ENSPNAG00000002911	sharpin	98	58.974	Pygocentrus_nattereri
ENSPKIG00000006933	shrprbck1r	76	69.981	ENSSFOG00015014150	-	98	69.981	Scleropages_formosus
ENSPKIG00000006933	shrprbck1r	58	75.172	ENSSFOG00015004028	sharpin	99	60.204	Scleropages_formosus
ENSPKIG00000006933	shrprbck1r	100	69.188	ENSSMAG00000018085	shrprbck1r	100	69.146	Scophthalmus_maximus
ENSPKIG00000006933	shrprbck1r	59	52.370	ENSSDUG00000019039	sharpin	96	52.029	Seriola_dumerili
ENSPKIG00000006933	shrprbck1r	100	72.803	ENSSDUG00000002959	shrprbck1r	100	72.385	Seriola_dumerili
ENSPKIG00000006933	shrprbck1r	100	73.082	ENSSLDG00000009026	shrprbck1r	100	72.664	Seriola_lalandi_dorsalis
ENSPKIG00000006933	shrprbck1r	96	70.707	ENSSPAG00000016097	shrprbck1r	99	70.418	Stegastes_partitus
ENSPKIG00000006933	shrprbck1r	59	59.709	ENSTRUG00000011046	sharpin	95	59.952	Takifugu_rubripes
ENSPKIG00000006933	shrprbck1r	100	67.967	ENSTRUG00000006949	shrprbck1r	100	68.384	Takifugu_rubripes
ENSPKIG00000006933	shrprbck1r	55	63.544	ENSTNIG00000008521	sharpin	94	63.544	Tetraodon_nigroviridis
ENSPKIG00000006933	shrprbck1r	59	48.926	ENSXCOG00000015019	sharpin	96	47.847	Xiphophorus_couchianus
ENSPKIG00000006933	shrprbck1r	100	67.643	ENSXCOG00000006701	shrprbck1r	100	67.364	Xiphophorus_couchianus
ENSPKIG00000006933	shrprbck1r	59	63.942	ENSXMAG00000022076	sharpin	94	63.221	Xiphophorus_maculatus
ENSPKIG00000006933	shrprbck1r	100	67.643	ENSXMAG00000018972	shrprbck1r	100	67.364	Xiphophorus_maculatus