EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007038 (Gene tree)
Gene ID: 111860871
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 78082 bases
Position: chrPGUA01000042.1:1070077-1148158
Accession: 111860871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023545	RRM_1	PF00076.22	2.3e-33	1	2
ENSPKIP00000023545	RRM_1	PF00076.22	2.3e-33	2	2
ENSPKIP00000023512	RRM_1	PF00076.22	2.7e-33	1	2
ENSPKIP00000023512	RRM_1	PF00076.22	2.7e-33	2	2
ENSPKIP00000023411	RRM_1	PF00076.22	3.4e-33	1	2
ENSPKIP00000023411	RRM_1	PF00076.22	3.4e-33	2	2
ENSPKIP00000023384	RRM_1	PF00076.22	3.6e-33	1	2
ENSPKIP00000023384	RRM_1	PF00076.22	3.6e-33	2	2
ENSPKIP00000023477	RRM_1	PF00076.22	3.8e-33	1	2
ENSPKIP00000023477	RRM_1	PF00076.22	3.8e-33	2	2
ENSPKIP00000023455	RRM_1	PF00076.22	7.5e-29	1	2
ENSPKIP00000023455	RRM_1	PF00076.22	7.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000004068	-	2033	-	ENSPKIP00000023384	379 (aa)	XP_023700722	UPI000CD62DE4
ENSPKIT00000004161	-	2057	-	ENSPKIP00000023477	387 (aa)	-	-
ENSPKIT00000004232	-	1865	-	ENSPKIP00000023545	323 (aa)	-	-
ENSPKIT00000004199	-	1925	-	ENSPKIP00000023512	343 (aa)	-	-
ENSPKIT00000004140	-	1044	-	ENSPKIP00000023455	347 (aa)	-	-
ENSPKIT00000004095	-	2038	-	ENSPKIP00000023411	371 (aa)	XP_023700723	UPI000CD602ED

Gene Model

Click here to download ENSPKIG00000007038's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007038	-	95	65.278	ENSPKIG00000023575	-	96	69.851
ENSPKIG00000007038	-	57	38.172	ENSPKIG00000020290	-	91	34.375
ENSPKIG00000007038	-	56	40.761	ENSPKIG00000006240	hnrnpa1b	59	41.111
ENSPKIG00000007038	-	56	35.385	ENSPKIG00000025417	rbm38	72	35.385
ENSPKIG00000007038	-	78	38.516	ENSPKIG00000025514	hnrnpdl	93	38.516
ENSPKIG00000007038	-	61	44.390	ENSPKIG00000025512	hnrnpd	78	44.444
ENSPKIG00000007038	-	69	37.647	ENSPKIG00000018122	-	90	37.647
ENSPKIG00000007038	-	54	40.571	ENSPKIG00000020281	-	79	34.800
ENSPKIG00000007038	-	57	48.087	ENSPKIG00000018904	-	61	46.377
ENSPKIG00000007038	-	50	93.407	ENSPKIG00000017107	-	81	93.407
ENSPKIG00000007038	-	54	41.143	ENSPKIG00000020270	HNRNPA0	93	35.391
ENSPKIG00000007038	-	99	34.441	ENSPKIG00000007696	dazap1	81	33.636
ENSPKIG00000007038	-	57	46.875	ENSPKIG00000008659	hnrnpaba	60	46.411
ENSPKIG00000007038	-	94	69.394	ENSPKIG00000016497	MSI1	96	73.734
ENSPKIG00000007038	-	55	40.884	ENSPKIG00000003028	hnrnpa1b	63	40.884
ENSPKIG00000007038	-	56	40.437	ENSPKIG00000022916	hnrnpa3	66	40.761

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007038	-	96	86.061	ENSG00000153944	MSI2	96	91.209	Homo_sapiens
ENSPKIG00000007038	-	96	93.004	ENSAPOG00000001658	msi2a	95	90.444	Acanthochromis_polyacanthus
ENSPKIG00000007038	-	94	80.627	ENSAMEG00000002697	MSI2	96	85.577	Ailuropoda_melanoleuca
ENSPKIG00000007038	-	96	86.420	ENSACIG00000009475	msi2a	100	77.551	Amphilophus_citrinellus
ENSPKIG00000007038	-	95	76.000	ENSAOCG00000014822	msi2a	69	84.444	Amphiprion_ocellaris
ENSPKIG00000007038	-	100	80.747	ENSAPEG00000007706	msi2a	96	85.350	Amphiprion_percula
ENSPKIG00000007038	-	97	80.511	ENSATEG00000003301	-	95	90.189	Anabas_testudineus
ENSPKIG00000007038	-	96	93.004	ENSATEG00000010498	msi2a	95	90.444	Anabas_testudineus
ENSPKIG00000007038	-	89	91.935	ENSACAG00000005452	MSI2	88	74.788	Anolis_carolinensis
ENSPKIG00000007038	-	96	86.061	ENSANAG00000037827	MSI2	96	90.159	Aotus_nancymaae
ENSPKIG00000007038	-	96	92.593	ENSACLG00000007752	msi2a	95	89.761	Astatotilapia_calliptera
ENSPKIG00000007038	-	96	93.827	ENSAMXG00000010474	msi2b	91	92.857	Astyanax_mexicanus
ENSPKIG00000007038	-	96	93.827	ENSAMXG00000032796	msi2a	96	90.506	Astyanax_mexicanus
ENSPKIG00000007038	-	93	87.333	ENSBTAG00000004406	MSI2	93	91.156	Bos_taurus
ENSPKIG00000007038	-	76	59.398	WBGene00003423	msi-1	77	59.770	Caenorhabditis_elegans
ENSPKIG00000007038	-	96	86.061	ENSCJAG00000013998	MSI2	96	90.159	Callithrix_jacchus
ENSPKIG00000007038	-	94	79.701	ENSCAFG00020025620	MSI2	73	89.954	Canis_lupus_dingo
ENSPKIG00000007038	-	96	84.545	ENSCHIG00000016580	MSI2	96	88.571	Capra_hircus
ENSPKIG00000007038	-	97	75.710	ENSCPOG00000034042	MSI2	95	85.502	Cavia_porcellus
ENSPKIG00000007038	-	96	86.061	ENSCCAG00000033927	MSI2	96	90.159	Cebus_capucinus
ENSPKIG00000007038	-	93	86.520	ENSCATG00000040879	MSI2	96	89.841	Cercocebus_atys
ENSPKIG00000007038	-	100	80.645	ENSCLAG00000014325	MSI2	100	81.720	Chinchilla_lanigera
ENSPKIG00000007038	-	96	86.061	ENSCSAG00000005633	MSI2	96	90.159	Chlorocebus_sabaeus
ENSPKIG00000007038	-	67	84.314	ENSCHOG00000008660	MSI2	83	84.314	Choloepus_hoffmanni
ENSPKIG00000007038	-	89	93.407	ENSCPBG00000009942	MSI2	92	84.762	Chrysemys_picta_bellii
ENSPKIG00000007038	-	82	50.739	ENSCING00000018579	-	94	52.113	Ciona_intestinalis
ENSPKIG00000007038	-	83	54.817	ENSCSAVG00000010397	-	95	56.026	Ciona_savignyi
ENSPKIG00000007038	-	95	82.819	ENSCANG00000036414	MSI2	92	92.000	Colobus_angolensis_palliatus
ENSPKIG00000007038	-	96	85.498	ENSCGRG00001013330	Msi2	96	89.557	Cricetulus_griseus_chok1gshd
ENSPKIG00000007038	-	94	80.398	ENSCGRG00000003141	Msi2	100	81.534	Cricetulus_griseus_crigri
ENSPKIG00000007038	-	82	62.281	ENSCSEG00000013557	msi2a	76	70.391	Cynoglossus_semilaevis
ENSPKIG00000007038	-	96	75.152	ENSCSEG00000003266	-	96	77.389	Cynoglossus_semilaevis
ENSPKIG00000007038	-	71	73.770	ENSCSEG00000013549	msi2a	100	73.770	Cynoglossus_semilaevis
ENSPKIG00000007038	-	96	93.004	ENSCVAG00000017075	msi2a	95	90.102	Cyprinodon_variegatus
ENSPKIG00000007038	-	96	91.358	ENSDARG00000033901	msi2a	100	80.670	Danio_rerio
ENSPKIG00000007038	-	96	94.650	ENSDARG00000032614	msi2b	100	100.000	Danio_rerio
ENSPKIG00000007038	-	97	79.876	ENSDNOG00000014501	MSI2	95	90.182	Dasypus_novemcinctus
ENSPKIG00000007038	-	82	66.234	ENSDORG00000005394	Msi2	79	77.717	Dipodomys_ordii
ENSPKIG00000007038	-	63	95.575	ENSDORG00000028440	-	100	95.575	Dipodomys_ordii
ENSPKIG00000007038	-	97	53.747	FBgn0260943	Rbp6	90	67.114	Drosophila_melanogaster
ENSPKIG00000007038	-	53	92.708	ENSETEG00000012450	-	50	92.708	Echinops_telfairi
ENSPKIG00000007038	-	94	57.692	ENSEBUG00000006732	msi2a	83	64.527	Eptatretus_burgeri
ENSPKIG00000007038	-	89	92.000	ENSEASG00005002965	MSI2	97	79.387	Equus_asinus_asinus
ENSPKIG00000007038	-	96	92.694	ENSECAG00000011435	MSI2	100	79.737	Equus_caballus
ENSPKIG00000007038	-	87	65.625	ENSEEUG00000007810	MSI2	100	75.889	Erinaceus_europaeus
ENSPKIG00000007038	-	89	95.062	ENSELUG00000011747	msi2a	96	86.984	Esox_lucius
ENSPKIG00000007038	-	96	94.262	ENSELUG00000001361	msi2b	100	81.612	Esox_lucius
ENSPKIG00000007038	-	51	75.510	ENSFCAG00000033787	-	82	75.641	Felis_catus
ENSPKIG00000007038	-	96	86.061	ENSFCAG00000041686	MSI2	96	91.209	Felis_catus
ENSPKIG00000007038	-	94	80.627	ENSFDAG00000016118	MSI2	100	81.766	Fukomys_damarensis
ENSPKIG00000007038	-	96	93.004	ENSFHEG00000000084	msi2a	96	92.763	Fundulus_heteroclitus
ENSPKIG00000007038	-	56	91.346	ENSGMOG00000007596	-	100	91.346	Gadus_morhua
ENSPKIG00000007038	-	100	79.301	ENSGALG00000005567	MSI2	100	80.376	Gallus_gallus
ENSPKIG00000007038	-	92	77.019	ENSGAFG00000006974	msi2a	90	93.377	Gambusia_affinis
ENSPKIG00000007038	-	96	86.475	ENSGAGG00000016542	MSI2	100	78.485	Gopherus_agassizii
ENSPKIG00000007038	-	94	80.571	ENSGGOG00000013182	MSI2	92	91.593	Gorilla_gorilla
ENSPKIG00000007038	-	96	92.593	ENSHBUG00000020800	msi2a	95	89.761	Haplochromis_burtoni
ENSPKIG00000007038	-	100	72.581	ENSHGLG00000012444	MSI2	100	73.656	Heterocephalus_glaber_female
ENSPKIG00000007038	-	79	70.690	ENSHGLG00100003744	MSI2	100	73.820	Heterocephalus_glaber_male
ENSPKIG00000007038	-	63	95.614	ENSHGLG00100004028	-	87	95.614	Heterocephalus_glaber_male
ENSPKIG00000007038	-	96	92.593	ENSHCOG00000000266	msi2a	95	83.784	Hippocampus_comes
ENSPKIG00000007038	-	90	81.070	ENSHCOG00000017241	-	98	64.677	Hippocampus_comes
ENSPKIG00000007038	-	96	94.650	ENSIPUG00000003732	msi2b	92	91.429	Ictalurus_punctatus
ENSPKIG00000007038	-	96	93.004	ENSIPUG00000021097	msi2a	96	90.136	Ictalurus_punctatus
ENSPKIG00000007038	-	97	75.710	ENSSTOG00000007884	MSI2	95	85.502	Ictidomys_tridecemlineatus
ENSPKIG00000007038	-	63	95.575	ENSJJAG00000009467	-	100	95.575	Jaculus_jaculus
ENSPKIG00000007038	-	79	68.750	ENSJJAG00000006292	-	93	76.344	Jaculus_jaculus
ENSPKIG00000007038	-	96	93.004	ENSKMAG00000009494	msi2a	96	89.172	Kryptolebias_marmoratus
ENSPKIG00000007038	-	96	93.004	ENSLBEG00000007061	msi2a	96	85.350	Labrus_bergylta
ENSPKIG00000007038	-	89	85.492	ENSLBEG00000026223	-	96	85.514	Labrus_bergylta
ENSPKIG00000007038	-	52	92.941	ENSLACG00000016798	MSI2	98	90.110	Latimeria_chalumnae
ENSPKIG00000007038	-	96	94.650	ENSLOCG00000004675	msi2b	100	84.553	Lepisosteus_oculatus
ENSPKIG00000007038	-	95	82.819	ENSMFAG00000003775	MSI2	92	92.000	Macaca_fascicularis
ENSPKIG00000007038	-	94	80.571	ENSMMUG00000002069	MSI2	92	92.000	Macaca_mulatta
ENSPKIG00000007038	-	96	86.061	ENSMNEG00000045275	MSI2	96	90.159	Macaca_nemestrina
ENSPKIG00000007038	-	95	82.819	ENSMLEG00000033888	MSI2	92	92.000	Mandrillus_leucophaeus
ENSPKIG00000007038	-	96	93.004	ENSMAMG00000010503	msi2a	95	90.444	Mastacembelus_armatus
ENSPKIG00000007038	-	96	93.004	ENSMAMG00000002488	-	99	93.377	Mastacembelus_armatus
ENSPKIG00000007038	-	96	92.593	ENSMZEG00005007676	msi2a	96	89.490	Maylandia_zebra
ENSPKIG00000007038	-	100	80.161	ENSMAUG00000003862	Msi2	100	81.233	Mesocricetus_auratus
ENSPKIG00000007038	-	96	86.061	ENSMICG00000013598	-	96	90.159	Microcebus_murinus
ENSPKIG00000007038	-	96	70.149	ENSMICG00000032913	-	96	73.125	Microcebus_murinus
ENSPKIG00000007038	-	100	80.376	ENSMOCG00000005820	Msi2	100	81.452	Microtus_ochrogaster
ENSPKIG00000007038	-	92	86.831	ENSMMOG00000008348	msi2a	90	92.701	Mola_mola
ENSPKIG00000007038	-	79	70.259	ENSMODG00000014790	MSI2	100	73.391	Monodelphis_domestica
ENSPKIG00000007038	-	100	92.810	ENSMALG00000000071	msi2a	100	92.810	Monopterus_albus
ENSPKIG00000007038	-	96	85.758	MGP_CAROLIEiJ_G0016948	Msi2	100	95.575	Mus_caroli
ENSPKIG00000007038	-	96	85.758	ENSMUSG00000069769	Msi2	100	95.575	Mus_musculus
ENSPKIG00000007038	-	96	85.758	MGP_PahariEiJ_G0018079	Msi2	100	95.575	Mus_pahari
ENSPKIG00000007038	-	96	85.758	MGP_SPRETEiJ_G0017795	Msi2	100	95.575	Mus_spretus
ENSPKIG00000007038	-	90	86.408	ENSMPUG00000015377	MSI2	93	90.816	Mustela_putorius_furo
ENSPKIG00000007038	-	90	86.084	ENSMLUG00000007865	MSI2	93	90.476	Myotis_lucifugus
ENSPKIG00000007038	-	100	80.376	ENSNGAG00000017807	Msi2	100	81.452	Nannospalax_galili
ENSPKIG00000007038	-	96	92.593	ENSNBRG00000014596	msi2a	92	93.421	Neolamprologus_brichardi
ENSPKIG00000007038	-	94	79.822	ENSNLEG00000008059	MSI2	96	91.469	Nomascus_leucogenys
ENSPKIG00000007038	-	68	81.699	ENSOPRG00000000872	-	64	81.699	Ochotona_princeps
ENSPKIG00000007038	-	100	80.645	ENSODEG00000011974	MSI2	100	81.720	Octodon_degus
ENSPKIG00000007038	-	70	93.377	ENSONIG00000001972	msi2a	84	93.377	Oreochromis_niloticus
ENSPKIG00000007038	-	90	93.750	ENSOANG00000005667	MSI2	97	74.757	Ornithorhynchus_anatinus
ENSPKIG00000007038	-	90	86.408	ENSOCUG00000010440	MSI2	93	90.816	Oryctolagus_cuniculus
ENSPKIG00000007038	-	96	93.004	ENSORLG00000009671	msi2a	95	90.102	Oryzias_latipes
ENSPKIG00000007038	-	96	93.004	ENSORLG00020021556	msi2a	95	90.102	Oryzias_latipes_hni
ENSPKIG00000007038	-	96	93.004	ENSORLG00015004592	msi2a	95	90.102	Oryzias_latipes_hsok
ENSPKIG00000007038	-	96	93.004	ENSOMEG00000000146	msi2a	95	90.102	Oryzias_melastigma
ENSPKIG00000007038	-	90	82.524	ENSOGAG00000005621	MSI2	95	86.735	Otolemur_garnettii
ENSPKIG00000007038	-	94	80.571	ENSPPAG00000037697	MSI2	92	91.593	Pan_paniscus
ENSPKIG00000007038	-	90	86.408	ENSPPRG00000001848	MSI2	92	92.000	Panthera_pardus
ENSPKIG00000007038	-	74	73.950	ENSPTIG00000021873	-	90	73.950	Panthera_tigris_altaica
ENSPKIG00000007038	-	94	79.822	ENSPTIG00000021678	MSI2	96	81.009	Panthera_tigris_altaica
ENSPKIG00000007038	-	94	80.571	ENSPTRG00000009437	MSI2	92	91.593	Pan_troglodytes
ENSPKIG00000007038	-	96	86.061	ENSPANG00000022319	MSI2	96	90.159	Papio_anubis
ENSPKIG00000007038	-	96	92.593	ENSPSIG00000008618	MSI2	100	79.259	Pelodiscus_sinensis
ENSPKIG00000007038	-	100	80.747	ENSPMGG00000005888	msi2a	96	85.350	Periophthalmus_magnuspinnatus
ENSPKIG00000007038	-	63	95.575	ENSPEMG00000021793	-	100	95.575	Peromyscus_maniculatus_bairdii
ENSPKIG00000007038	-	100	77.628	ENSPCIG00000006063	MSI2	100	79.474	Phascolarctos_cinereus
ENSPKIG00000007038	-	58	91.429	ENSPFOG00000019337	MSI2	92	91.429	Poecilia_formosa
ENSPKIG00000007038	-	70	89.510	ENSPLAG00000000436	msi2a	76	90.141	Poecilia_latipinna
ENSPKIG00000007038	-	78	79.021	ENSPMEG00000013247	msi2a	91	79.021	Poecilia_mexicana
ENSPKIG00000007038	-	96	93.004	ENSPREG00000000881	msi2a	95	85.032	Poecilia_reticulata
ENSPKIG00000007038	-	97	74.359	ENSPPYG00000008244	-	94	85.778	Pongo_abelii
ENSPKIG00000007038	-	60	77.500	ENSPCAG00000010552	MSI2	84	74.790	Procavia_capensis
ENSPKIG00000007038	-	63	96.154	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSPKIG00000007038	-	90	78.305	ENSPVAG00000017053	MSI2	96	82.500	Pteropus_vampyrus
ENSPKIG00000007038	-	96	92.593	ENSPNYG00000018393	msi2a	96	89.490	Pundamilia_nyererei
ENSPKIG00000007038	-	96	93.827	ENSPNAG00000000844	msi2b	100	83.033	Pygocentrus_nattereri
ENSPKIG00000007038	-	96	93.416	ENSPNAG00000014957	msi2a	96	90.190	Pygocentrus_nattereri
ENSPKIG00000007038	-	97	79.553	ENSRNOG00000025338	Msi2	95	90.189	Rattus_norvegicus
ENSPKIG00000007038	-	63	95.614	ENSRROG00000034421	-	92	95.614	Rhinopithecus_roxellana
ENSPKIG00000007038	-	94	80.571	ENSSBOG00000026425	MSI2	92	92.000	Saimiri_boliviensis_boliviensis
ENSPKIG00000007038	-	94	80.571	ENSSHAG00000008672	MSI2	100	81.714	Sarcophilus_harrisii
ENSPKIG00000007038	-	90	90.260	ENSSFOG00015021687	-	93	94.139	Scleropages_formosus
ENSPKIG00000007038	-	100	62.408	ENSSFOG00015012168	msi2b	100	62.408	Scleropages_formosus
ENSPKIG00000007038	-	96	93.004	ENSSMAG00000018484	msi2a	95	90.102	Scophthalmus_maximus
ENSPKIG00000007038	-	96	93.004	ENSSDUG00000014507	msi2a	95	90.444	Seriola_dumerili
ENSPKIG00000007038	-	100	76.389	ENSSDUG00000021968	-	99	92.715	Seriola_dumerili
ENSPKIG00000007038	-	96	93.004	ENSSLDG00000017172	msi2a	95	90.444	Seriola_lalandi_dorsalis
ENSPKIG00000007038	-	70	88.957	ENSSPUG00000000913	-	96	88.957	Sphenodon_punctatus
ENSPKIG00000007038	-	96	93.004	ENSSPAG00000017793	msi2a	95	90.444	Stegastes_partitus
ENSPKIG00000007038	-	96	86.061	ENSSSCG00000038505	MSI2	96	90.816	Sus_scrofa
ENSPKIG00000007038	-	79	70.690	ENSTGUG00000008452	MSI2	100	73.820	Taeniopygia_guttata
ENSPKIG00000007038	-	92	92.593	ENSTRUG00000021248	msi2a	96	83.801	Takifugu_rubripes
ENSPKIG00000007038	-	75	75.207	ENSTBEG00000001241	MSI2	73	75.207	Tupaia_belangeri
ENSPKIG00000007038	-	97	72.426	ENSTTRG00000002189	MSI2	95	81.778	Tursiops_truncatus
ENSPKIG00000007038	-	89	88.194	ENSUAMG00000000700	MSI2	92	92.000	Ursus_americanus
ENSPKIG00000007038	-	85	90.984	ENSUMAG00000000505	MSI2	95	90.984	Ursus_maritimus
ENSPKIG00000007038	-	56	79.670	ENSVPAG00000006837	-	62	79.670	Vicugna_pacos
ENSPKIG00000007038	-	96	85.666	ENSVVUG00000011783	MSI2	98	89.954	Vulpes_vulpes
ENSPKIG00000007038	-	95	90.909	ENSXCOG00000006113	msi2a	100	79.070	Xiphophorus_couchianus
ENSPKIG00000007038	-	96	93.004	ENSXMAG00000000608	msi2a	95	89.761	Xiphophorus_maculatus