EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007070 (Gene tree)
Gene ID: 111843192
Gene Symbol: alyref
Alias: -
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 3832 bases
Position: chrPGUA01000100.1:1432410-1436241
Accession: 111843192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023445	RRM_1	PF00076.22	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000004130	-	1971	-	ENSPKIP00000023445	257 (aa)	XP_023666322	UPI000CD644D0

Gene Model

Click here to download ENSPKIG00000007070's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG
pki03040	Spliceosome	KEGG
pki05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007070's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007070	alyref	99	73.783	ENSPKIG00000006233	-	80	73.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007070	alyref	100	54.647	ENSAPOG00000000183	-	100	53.623	Acanthochromis_polyacanthus
ENSPKIG00000007070	alyref	100	51.379	ENSACIG00000020351	-	100	51.916	Amphilophus_citrinellus
ENSPKIG00000007070	alyref	99	68.750	ENSACIG00000006351	alyref	98	71.533	Amphilophus_citrinellus
ENSPKIG00000007070	alyref	100	55.147	ENSAOCG00000019305	-	100	52.297	Amphiprion_ocellaris
ENSPKIG00000007070	alyref	100	72.727	ENSAOCG00000014012	alyref	100	76.364	Amphiprion_ocellaris
ENSPKIG00000007070	alyref	100	56.985	ENSAPEG00000013527	-	100	52.297	Amphiprion_percula
ENSPKIG00000007070	alyref	100	72.727	ENSAPEG00000014603	alyref	100	76.364	Amphiprion_percula
ENSPKIG00000007070	alyref	100	59.108	ENSATEG00000000382	-	100	58.364	Anabas_testudineus
ENSPKIG00000007070	alyref	100	72.043	ENSATEG00000004307	alyref	100	75.269	Anabas_testudineus
ENSPKIG00000007070	alyref	100	70.652	ENSACLG00000008432	alyref	100	75.000	Astatotilapia_calliptera
ENSPKIG00000007070	alyref	100	54.064	ENSACLG00000010184	-	100	54.770	Astatotilapia_calliptera
ENSPKIG00000007070	alyref	100	74.643	ENSAMXG00000007359	alyref	100	76.429	Astyanax_mexicanus
ENSPKIG00000007070	alyref	99	46.454	ENSCING00000013568	-	99	48.188	Ciona_intestinalis
ENSPKIG00000007070	alyref	99	49.425	ENSCSAVG00000003324	-	99	45.620	Ciona_savignyi
ENSPKIG00000007070	alyref	100	68.364	ENSCSEG00000017800	alyref	100	70.909	Cynoglossus_semilaevis
ENSPKIG00000007070	alyref	100	69.485	ENSCVAG00000014869	alyref	100	74.632	Cyprinodon_variegatus
ENSPKIG00000007070	alyref	100	52.290	ENSCVAG00000007789	-	100	48.561	Cyprinodon_variegatus
ENSPKIG00000007070	alyref	100	74.021	ENSDARG00000077732	alyref	100	75.000	Danio_rerio
ENSPKIG00000007070	alyref	97	44.118	FBgn0010774	Ref1	65	52.601	Drosophila_melanogaster
ENSPKIG00000007070	alyref	69	47.895	ENSEBUG00000006305	alyref	100	42.963	Eptatretus_burgeri
ENSPKIG00000007070	alyref	99	55.294	ENSEBUG00000008253	alyref	95	53.725	Eptatretus_burgeri
ENSPKIG00000007070	alyref	100	64.769	ENSELUG00000008849	-	100	64.413	Esox_lucius
ENSPKIG00000007070	alyref	100	72.593	ENSELUG00000017178	alyref	100	75.185	Esox_lucius
ENSPKIG00000007070	alyref	58	77.358	ENSFALG00000011923	-	99	77.019	Ficedula_albicollis
ENSPKIG00000007070	alyref	100	53.585	ENSFHEG00000004698	-	100	49.638	Fundulus_heteroclitus
ENSPKIG00000007070	alyref	100	72.491	ENSFHEG00000019426	alyref	100	74.908	Fundulus_heteroclitus
ENSPKIG00000007070	alyref	67	60.417	ENSGMOG00000013122	-	100	60.938	Gadus_morhua
ENSPKIG00000007070	alyref	100	72.453	ENSGMOG00000009882	alyref	100	70.036	Gadus_morhua
ENSPKIG00000007070	alyref	100	49.434	ENSGAFG00000007573	-	100	47.312	Gambusia_affinis
ENSPKIG00000007070	alyref	100	69.424	ENSGAFG00000006014	alyref	100	75.092	Gambusia_affinis
ENSPKIG00000007070	alyref	100	55.439	ENSHBUG00000001454	-	100	55.088	Haplochromis_burtoni
ENSPKIG00000007070	alyref	100	70.652	ENSHBUG00000020196	alyref	100	75.000	Haplochromis_burtoni
ENSPKIG00000007070	alyref	98	49.071	ENSHCOG00000012825	-	94	49.071	Hippocampus_comes
ENSPKIG00000007070	alyref	100	77.239	ENSIPUG00000009469	alyref	100	74.909	Ictalurus_punctatus
ENSPKIG00000007070	alyref	72	68.280	ENSSTOG00000016570	-	92	70.391	Ictidomys_tridecemlineatus
ENSPKIG00000007070	alyref	100	54.373	ENSKMAG00000006462	-	100	51.103	Kryptolebias_marmoratus
ENSPKIG00000007070	alyref	100	73.285	ENSKMAG00000008912	alyref	100	74.182	Kryptolebias_marmoratus
ENSPKIG00000007070	alyref	99	50.000	ENSLBEG00000012930	-	99	48.571	Labrus_bergylta
ENSPKIG00000007070	alyref	100	67.391	ENSLBEG00000023118	alyref	90	70.036	Labrus_bergylta
ENSPKIG00000007070	alyref	100	49.329	ENSLBEG00000005387	-	100	51.903	Labrus_bergylta
ENSPKIG00000007070	alyref	76	66.818	ENSLOCG00000013879	alyref	89	73.953	Lepisosteus_oculatus
ENSPKIG00000007070	alyref	100	53.650	ENSMAMG00000005464	-	100	54.380	Mastacembelus_armatus
ENSPKIG00000007070	alyref	100	70.609	ENSMAMG00000003034	alyref	100	74.275	Mastacembelus_armatus
ENSPKIG00000007070	alyref	100	53.710	ENSMZEG00005012096	-	100	54.930	Maylandia_zebra
ENSPKIG00000007070	alyref	100	70.652	ENSMZEG00005008639	alyref	100	75.000	Maylandia_zebra
ENSPKIG00000007070	alyref	99	72.694	ENSMMOG00000012458	alyref	97	77.206	Mola_mola
ENSPKIG00000007070	alyref	99	48.289	ENSMMOG00000007032	-	98	50.189	Mola_mola
ENSPKIG00000007070	alyref	100	52.128	ENSMALG00000006054	-	100	49.492	Monopterus_albus
ENSPKIG00000007070	alyref	98	51.661	ENSMLUG00000009247	-	98	52.434	Myotis_lucifugus
ENSPKIG00000007070	alyref	98	53.091	ENSMLUG00000028605	-	98	55.720	Myotis_lucifugus
ENSPKIG00000007070	alyref	100	56.940	ENSMLUG00000014372	-	100	58.672	Myotis_lucifugus
ENSPKIG00000007070	alyref	98	56.274	ENSMLUG00000030671	-	72	63.590	Myotis_lucifugus
ENSPKIG00000007070	alyref	98	54.044	ENSMLUG00000022178	-	98	54.753	Myotis_lucifugus
ENSPKIG00000007070	alyref	98	53.791	ENSMLUG00000022467	-	98	52.015	Myotis_lucifugus
ENSPKIG00000007070	alyref	100	57.037	ENSMLUG00000006521	-	100	57.196	Myotis_lucifugus
ENSPKIG00000007070	alyref	100	55.594	ENSMLUG00000004098	-	100	58.672	Myotis_lucifugus
ENSPKIG00000007070	alyref	100	64.504	ENSNGAG00000022014	-	100	60.662	Nannospalax_galili
ENSPKIG00000007070	alyref	100	69.928	ENSNBRG00000001747	alyref	100	74.275	Neolamprologus_brichardi
ENSPKIG00000007070	alyref	100	54.804	ENSNBRG00000017460	-	100	55.516	Neolamprologus_brichardi
ENSPKIG00000007070	alyref	100	71.685	ENSONIG00000019434	alyref	100	74.552	Oreochromis_niloticus
ENSPKIG00000007070	alyref	100	54.317	ENSONIG00000003296	-	100	53.381	Oreochromis_niloticus
ENSPKIG00000007070	alyref	99	42.038	ENSORLG00000001620	-	60	48.198	Oryzias_latipes
ENSPKIG00000007070	alyref	100	50.558	ENSORLG00020015673	-	100	47.018	Oryzias_latipes_hni
ENSPKIG00000007070	alyref	100	70.480	ENSORLG00020011942	alyref	100	71.956	Oryzias_latipes_hni
ENSPKIG00000007070	alyref	100	52.030	ENSORLG00015015143	-	100	47.018	Oryzias_latipes_hsok
ENSPKIG00000007070	alyref	100	72.694	ENSORLG00015022664	alyref	100	74.170	Oryzias_latipes_hsok
ENSPKIG00000007070	alyref	100	68.864	ENSOMEG00000019176	alyref	100	71.691	Oryzias_melastigma
ENSPKIG00000007070	alyref	99	54.307	ENSOMEG00000007158	-	97	50.752	Oryzias_melastigma
ENSPKIG00000007070	alyref	92	61.200	ENSPPAG00000036403	-	68	76.966	Pan_paniscus
ENSPKIG00000007070	alyref	99	70.632	ENSPMGG00000016600	alyref	91	73.529	Periophthalmus_magnuspinnatus
ENSPKIG00000007070	alyref	74	49.231	ENSPMGG00000012994	-	99	48.259	Periophthalmus_magnuspinnatus
ENSPKIG00000007070	alyref	100	63.424	ENSPEMG00000016628	-	100	60.536	Peromyscus_maniculatus_bairdii
ENSPKIG00000007070	alyref	100	50.562	ENSPFOG00000017094	-	100	46.975	Poecilia_formosa
ENSPKIG00000007070	alyref	100	69.818	ENSPFOG00000022825	alyref	99	72.364	Poecilia_formosa
ENSPKIG00000007070	alyref	100	50.562	ENSPLAG00000014380	-	100	46.975	Poecilia_latipinna
ENSPKIG00000007070	alyref	100	70.073	ENSPLAG00000006948	alyref	100	72.628	Poecilia_latipinna
ENSPKIG00000007070	alyref	100	50.562	ENSPMEG00000023039	-	100	46.975	Poecilia_mexicana
ENSPKIG00000007070	alyref	100	69.818	ENSPMEG00000003547	alyref	100	72.364	Poecilia_mexicana
ENSPKIG00000007070	alyref	100	70.438	ENSPREG00000015795	alyref	100	73.358	Poecilia_reticulata
ENSPKIG00000007070	alyref	100	51.838	ENSPREG00000003649	-	100	47.703	Poecilia_reticulata
ENSPKIG00000007070	alyref	99	51.799	ENSPNYG00000002879	-	98	49.462	Pundamilia_nyererei
ENSPKIG00000007070	alyref	100	70.652	ENSPNYG00000017498	alyref	100	75.000	Pundamilia_nyererei
ENSPKIG00000007070	alyref	100	74.632	ENSPNAG00000002531	alyref	100	72.794	Pygocentrus_nattereri
ENSPKIG00000007070	alyref	71	76.064	ENSSBOG00000030924	-	87	76.471	Saimiri_boliviensis_boliviensis
ENSPKIG00000007070	alyref	99	56.977	ENSSHAG00000012866	-	78	62.245	Sarcophilus_harrisii
ENSPKIG00000007070	alyref	99	54.643	ENSSHAG00000000609	-	99	56.031	Sarcophilus_harrisii
ENSPKIG00000007070	alyref	76	78.818	ENSSFOG00015003923	alyref	73	81.281	Scleropages_formosus
ENSPKIG00000007070	alyref	67	79.891	ENSSFOG00015003678	alyref	83	79.891	Scleropages_formosus
ENSPKIG00000007070	alyref	100	52.465	ENSSMAG00000011169	-	100	57.000	Scophthalmus_maximus
ENSPKIG00000007070	alyref	100	69.343	ENSSMAG00000009283	alyref	100	72.628	Scophthalmus_maximus
ENSPKIG00000007070	alyref	100	71.636	ENSSDUG00000016158	alyref	100	74.909	Seriola_dumerili
ENSPKIG00000007070	alyref	100	71.014	ENSSLDG00000017803	alyref	100	74.638	Seriola_lalandi_dorsalis
ENSPKIG00000007070	alyref	99	55.474	ENSSPAG00000017028	-	96	53.986	Stegastes_partitus
ENSPKIG00000007070	alyref	100	53.114	ENSTRUG00000003051	-	100	51.273	Takifugu_rubripes
ENSPKIG00000007070	alyref	100	62.718	ENSTNIG00000011595	alyref	100	63.899	Tetraodon_nigroviridis
ENSPKIG00000007070	alyref	100	54.580	ENSTNIG00000014136	-	100	50.575	Tetraodon_nigroviridis
ENSPKIG00000007070	alyref	68	76.374	ENSVVUG00000000272	-	82	77.901	Vulpes_vulpes
ENSPKIG00000007070	alyref	99	68.727	ENSXCOG00000018047	alyref	99	73.260	Xiphophorus_couchianus
ENSPKIG00000007070	alyref	100	51.527	ENSXMAG00000018086	-	100	48.551	Xiphophorus_maculatus
ENSPKIG00000007070	alyref	99	68.727	ENSXMAG00000012218	alyref	99	73.626	Xiphophorus_maculatus