EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000007204 (Gene tree)
Gene ID
111847188
Gene Symbol
srsf1a
Alias
-
Full Name
serine/arginine-rich splicing factor 1B-like
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
2183 bases
Position
chrPGUA01000165.1:1017676-1019858
Accession
111847188
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000023675RRM_1PF00076.224.1e-3312
ENSPKIP00000023675RRM_1PF00076.224.1e-3322
ENSPKIP00000023661RRM_1PF00076.225e-3312
ENSPKIP00000023661RRM_1PF00076.225e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000004348-1346-ENSPKIP00000023661245 (aa)XP_023673931UPI000CD66037
ENSPKIT00000004362-696-ENSPKIP00000023675231 (aa)--
Gene Model
Click here to download ENSPKIG00000007204's gene model file
Pathways
Pathway IDPathway NameSource
pki03040SpliceosomeKEGG
pki05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007204's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000007204srsf1a9442.570ENSPKIG00000018463-6546.479
ENSPKIG00000007204srsf1a7144.134ENSPKIG00000002054srsf5a6341.899
ENSPKIG00000007204srsf1a5244.094ENSPKIG00000015603-8643.307
ENSPKIG00000007204srsf1a7671.023ENSPKIG00000024851SRSF96968.182
ENSPKIG00000007204srsf1a7767.978ENSPKIG00000023787srsf97267.614
ENSPKIG00000007204srsf1a9996.311ENSPKIG00000012857srsf1b9996.311
ENSPKIG00000007204srsf1a6945.665ENSPKIG00000015703-9641.379
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000007204srsf1a9995.102ENSG00000136450SRSF19995.102Homo_sapiens
ENSPKIG00000007204srsf1a8388.542ENSAPOG00000008542-8087.000Acanthochromis_polyacanthus
ENSPKIG00000007204srsf1a8390.625ENSAPOG00000002748-7890.625Acanthochromis_polyacanthus
ENSPKIG00000007204srsf1a8391.623ENSAMEG00000002635SRSF17892.708Ailuropoda_melanoleuca
ENSPKIG00000007204srsf1a8390.625ENSACIG00000008091srsf1a8388.542Amphilophus_citrinellus
ENSPKIG00000007204srsf1a8387.940ENSAOCG00000000337-8187.000Amphiprion_ocellaris
ENSPKIG00000007204srsf1a8391.146ENSAOCG00000010671-8391.146Amphiprion_ocellaris
ENSPKIG00000007204srsf1a8391.146ENSAPEG00000009915-8391.146Amphiprion_percula
ENSPKIG00000007204srsf1a8387.940ENSAPEG00000023352-7987.500Amphiprion_percula
ENSPKIG00000007204srsf1a8686.364ENSATEG00000021567-9682.251Anabas_testudineus
ENSPKIG00000007204srsf1a8391.146ENSATEG00000022403-7891.146Anabas_testudineus
ENSPKIG00000007204srsf1a9995.918ENSACAG00000005542-9995.918Anolis_carolinensis
ENSPKIG00000007204srsf1a8468.041ENSANAG00000025417-7367.708Aotus_nancymaae
ENSPKIG00000007204srsf1a9895.062ENSANAG00000020583-9695.062Aotus_nancymaae
ENSPKIG00000007204srsf1a9690.041ENSAMXG00000035996srsf1a8092.040Astyanax_mexicanus
ENSPKIG00000007204srsf1a5778.710ENSAMXG00000024373-7280.000Astyanax_mexicanus
ENSPKIG00000007204srsf1a9995.102ENSBTAG00000014766SRSF19995.102Bos_taurus
ENSPKIG00000007204srsf1a9895.062ENSCJAG00000041713-9695.062Callithrix_jacchus
ENSPKIG00000007204srsf1a8386.010ENSCJAG00000008111-8686.082Callithrix_jacchus
ENSPKIG00000007204srsf1a9895.062ENSCAFG00000017430SRSF19695.062Canis_familiaris
ENSPKIG00000007204srsf1a9895.062ENSCAFG00020025632-9695.062Canis_lupus_dingo
ENSPKIG00000007204srsf1a9995.102ENSCHIG00000010787SRSF19995.102Capra_hircus
ENSPKIG00000007204srsf1a9895.062ENSTSYG00000013899-9695.062Carlito_syrichta
ENSPKIG00000007204srsf1a9995.102ENSCPOG00000032681-9995.102Cavia_porcellus
ENSPKIG00000007204srsf1a9995.102ENSCCAG00000029484-9995.102Cebus_capucinus
ENSPKIG00000007204srsf1a9895.062ENSCATG00000042294-9695.062Cercocebus_atys
ENSPKIG00000007204srsf1a9995.102ENSCLAG00000014707-9995.102Chinchilla_lanigera
ENSPKIG00000007204srsf1a9991.393ENSCSAG00000005642-9485.232Chlorocebus_sabaeus
ENSPKIG00000007204srsf1a9995.102ENSCHOG00000001899SRSF19995.102Choloepus_hoffmanni
ENSPKIG00000007204srsf1a9996.327ENSCPBG00000009851-9996.327Chrysemys_picta_bellii
ENSPKIG00000007204srsf1a9895.062ENSCANG00000029726-9695.062Colobus_angolensis_palliatus
ENSPKIG00000007204srsf1a9895.062ENSCGRG00001000670Srsf19695.062Cricetulus_griseus_chok1gshd
ENSPKIG00000007204srsf1a9995.102ENSCGRG00000005590Srsf19995.102Cricetulus_griseus_crigri
ENSPKIG00000007204srsf1a8490.722ENSCSEG00000014272-7990.863Cynoglossus_semilaevis
ENSPKIG00000007204srsf1a8280.769ENSCSEG00000009973-8079.904Cynoglossus_semilaevis
ENSPKIG00000007204srsf1a8391.146ENSCVAG00000018617-7891.146Cyprinodon_variegatus
ENSPKIG00000007204srsf1a8486.802ENSCVAG00000005458-9287.027Cyprinodon_variegatus
ENSPKIG00000007204srsf1a10095.951ENSDARG00000017843srsf1b10095.951Danio_rerio
ENSPKIG00000007204srsf1a8488.350ENSDARG00000057691srsf1a10090.674Danio_rerio
ENSPKIG00000007204srsf1a9895.062ENSDNOG00000011737-9695.062Dasypus_novemcinctus
ENSPKIG00000007204srsf1a9995.102ENSDORG00000015082Srsf19995.102Dipodomys_ordii
ENSPKIG00000007204srsf1a7791.667ENSETEG00000005349-6292.265Echinops_telfairi
ENSPKIG00000007204srsf1a9895.062ENSEASG00005002922-9695.062Equus_asinus_asinus
ENSPKIG00000007204srsf1a9995.102ENSECAG00000016654SRSF19995.102Equus_caballus
ENSPKIG00000007204srsf1a7795.556ENSEEUG00000009255-6295.556Erinaceus_europaeus
ENSPKIG00000007204srsf1a8494.872ENSELUG00000021646srsf1a7893.846Esox_lucius
ENSPKIG00000007204srsf1a9895.062ENSFCAG00000002250-9695.062Felis_catus
ENSPKIG00000007204srsf1a9880.165ENSFALG00000005062-9680.165Ficedula_albicollis
ENSPKIG00000007204srsf1a9995.102ENSFDAG00000010646-9995.102Fukomys_damarensis
ENSPKIG00000007204srsf1a8391.146ENSFHEG00000003174srsf1a8391.146Fundulus_heteroclitus
ENSPKIG00000007204srsf1a8590.816ENSGMOG00000014787-8089.529Gadus_morhua
ENSPKIG00000007204srsf1a9996.327ENSGALG00000005525SRSF19996.327Gallus_gallus
ENSPKIG00000007204srsf1a8386.458ENSGACG00000020621srsf1b7885.417Gasterosteus_aculeatus
ENSPKIG00000007204srsf1a9896.296ENSGAGG00000022965-9696.296Gopherus_agassizii
ENSPKIG00000007204srsf1a9895.062ENSGGOG00000004386SRSF19695.062Gorilla_gorilla
ENSPKIG00000007204srsf1a8391.146ENSHBUG00000016788srsf1a8188.542Haplochromis_burtoni
ENSPKIG00000007204srsf1a8795.349ENSHGLG00000000669-10095.349Heterocephalus_glaber_female
ENSPKIG00000007204srsf1a8795.349ENSHGLG00000000600-10095.349Heterocephalus_glaber_female
ENSPKIG00000007204srsf1a9995.102ENSHGLG00100016906-9995.102Heterocephalus_glaber_male
ENSPKIG00000007204srsf1a8484.500ENSHCOG00000018918srsf1a8882.743Hippocampus_comes
ENSPKIG00000007204srsf1a9589.167ENSIPUG00000017039srsf1a7992.500Ictalurus_punctatus
ENSPKIG00000007204srsf1a9996.327ENSIPUG00000008750srsf1b7995.361Ictalurus_punctatus
ENSPKIG00000007204srsf1a9995.102ENSSTOG00000000243-9995.102Ictidomys_tridecemlineatus
ENSPKIG00000007204srsf1a9995.102ENSJJAG00000000102-9995.102Jaculus_jaculus
ENSPKIG00000007204srsf1a5285.246ENSJJAG00000014464-9388.710Jaculus_jaculus
ENSPKIG00000007204srsf1a8391.192ENSKMAG00000019232srsf1a7890.155Kryptolebias_marmoratus
ENSPKIG00000007204srsf1a8392.188ENSLBEG00000020864-8392.188Labrus_bergylta
ENSPKIG00000007204srsf1a8383.163ENSLBEG00000015294-7982.741Labrus_bergylta
ENSPKIG00000007204srsf1a8494.330ENSLACG00000014160srsf1a7393.782Latimeria_chalumnae
ENSPKIG00000007204srsf1a8394.271ENSLOCG00000005994srsf1a7895.337Lepisosteus_oculatus
ENSPKIG00000007204srsf1a9995.102ENSLAFG00000025743SRSF19995.102Loxodonta_africana
ENSPKIG00000007204srsf1a9995.102ENSMFAG00000040003-9995.102Macaca_fascicularis
ENSPKIG00000007204srsf1a9989.754ENSMMUG00000003260-9490.206Macaca_mulatta
ENSPKIG00000007204srsf1a9895.062ENSMMUG00000004725SRSF19695.062Macaca_mulatta
ENSPKIG00000007204srsf1a9989.344ENSMNEG00000015983-9483.122Macaca_nemestrina
ENSPKIG00000007204srsf1a9895.062ENSMNEG00000027680-9695.062Macaca_nemestrina
ENSPKIG00000007204srsf1a9995.102ENSMLEG00000040509SRSF19995.102Mandrillus_leucophaeus
ENSPKIG00000007204srsf1a9990.496ENSMLEG00000015243-9482.979Mandrillus_leucophaeus
ENSPKIG00000007204srsf1a8393.750ENSMAMG00000019691-8092.746Mastacembelus_armatus
ENSPKIG00000007204srsf1a8391.146ENSMAMG00000018454-7891.146Mastacembelus_armatus
ENSPKIG00000007204srsf1a8389.005ENSMAMG00000019687-7887.500Mastacembelus_armatus
ENSPKIG00000007204srsf1a9995.102ENSMAUG00000021845Srsf19995.102Mesocricetus_auratus
ENSPKIG00000007204srsf1a9895.062ENSMICG00000013639-9695.062Microcebus_murinus
ENSPKIG00000007204srsf1a9995.102ENSMOCG00000001996Srsf19995.102Microtus_ochrogaster
ENSPKIG00000007204srsf1a8392.188ENSMMOG00000014354srsf1a8392.188Mola_mola
ENSPKIG00000007204srsf1a7795.580ENSMODG00000014781-6295.580Monodelphis_domestica
ENSPKIG00000007204srsf1a8391.146ENSMALG00000017129-7591.146Monopterus_albus
ENSPKIG00000007204srsf1a8677.778ENSMALG00000007763-7878.646Monopterus_albus
ENSPKIG00000007204srsf1a9995.102MGP_CAROLIEiJ_G0016943Srsf19995.102Mus_caroli
ENSPKIG00000007204srsf1a9995.102ENSMUSG00000018379Srsf19995.102Mus_musculus
ENSPKIG00000007204srsf1a9995.102MGP_PahariEiJ_G0018074Srsf19995.102Mus_pahari
ENSPKIG00000007204srsf1a9995.102MGP_SPRETEiJ_G0017790Srsf19995.102Mus_spretus
ENSPKIG00000007204srsf1a9995.102ENSMPUG00000015369SRSF19995.102Mustela_putorius_furo
ENSPKIG00000007204srsf1a8588.832ENSMLUG00000023995-7886.979Myotis_lucifugus
ENSPKIG00000007204srsf1a9995.102ENSMLUG00000011040SRSF19995.102Myotis_lucifugus
ENSPKIG00000007204srsf1a9995.102ENSNGAG00000011395Srsf19995.102Nannospalax_galili
ENSPKIG00000007204srsf1a9978.601ENSNBRG00000008041srsf1b7881.771Neolamprologus_brichardi
ENSPKIG00000007204srsf1a9895.062ENSNLEG00000008088-9695.062Nomascus_leucogenys
ENSPKIG00000007204srsf1a5392.800ENSMEUG00000002783-9892.800Notamacropus_eugenii
ENSPKIG00000007204srsf1a5689.394ENSOPRG00000001234-7291.667Ochotona_princeps
ENSPKIG00000007204srsf1a9995.102ENSODEG00000011481-9995.102Octodon_degus
ENSPKIG00000007204srsf1a8391.146ENSONIG00000013160-7888.542Oreochromis_niloticus
ENSPKIG00000007204srsf1a9489.655ENSONIG00000004860-7992.746Oreochromis_niloticus
ENSPKIG00000007204srsf1a9969.106ENSOCUG00000010894-7573.016Oryctolagus_cuniculus
ENSPKIG00000007204srsf1a8391.146ENSORLG00000004580srsf1a7891.146Oryzias_latipes
ENSPKIG00000007204srsf1a8391.146ENSORLG00020009456srsf1a8391.146Oryzias_latipes_hni
ENSPKIG00000007204srsf1a8391.146ENSORLG00015014384srsf1a8391.146Oryzias_latipes_hsok
ENSPKIG00000007204srsf1a7589.655ENSOMEG00000004106srsf1a7189.655Oryzias_melastigma
ENSPKIG00000007204srsf1a9995.102ENSOGAG00000025950-9995.102Otolemur_garnettii
ENSPKIG00000007204srsf1a9992.975ENSOARG00000008323SRSF19892.975Ovis_aries
ENSPKIG00000007204srsf1a9995.102ENSPPAG00000043403-9995.102Pan_paniscus
ENSPKIG00000007204srsf1a9995.102ENSPPRG00000004238-9995.102Panthera_pardus
ENSPKIG00000007204srsf1a9895.062ENSPTRG00000049077SRSF19695.062Pan_troglodytes
ENSPKIG00000007204srsf1a9973.770ENSPANG00000030275-9463.559Papio_anubis
ENSPKIG00000007204srsf1a9895.062ENSPANG00000022305-9695.062Papio_anubis
ENSPKIG00000007204srsf1a8386.154ENSPSIG00000009000-7896.528Pelodiscus_sinensis
ENSPKIG00000007204srsf1a9685.470ENSPMGG00000005467-7984.896Periophthalmus_magnuspinnatus
ENSPKIG00000007204srsf1a8389.062ENSPMGG00000013112-8288.021Periophthalmus_magnuspinnatus
ENSPKIG00000007204srsf1a9995.102ENSPEMG00000021416Srsf19995.102Peromyscus_maniculatus_bairdii
ENSPKIG00000007204srsf1a9995.122ENSPCIG00000006076-9995.122Phascolarctos_cinereus
ENSPKIG00000007204srsf1a8587.000ENSPFOG00000018325-7087.245Poecilia_formosa
ENSPKIG00000007204srsf1a8587.000ENSPLAG00000008416srsf1b8087.245Poecilia_latipinna
ENSPKIG00000007204srsf1a5389.344ENSPMEG00000020607-9889.344Poecilia_mexicana
ENSPKIG00000007204srsf1a5389.344ENSPMEG00000014312-9889.344Poecilia_mexicana
ENSPKIG00000007204srsf1a8587.000ENSPMEG00000002388-8087.245Poecilia_mexicana
ENSPKIG00000007204srsf1a8391.146ENSPREG00000009667srsf1a7891.146Poecilia_reticulata
ENSPKIG00000007204srsf1a9995.102ENSPPYG00000008240SRSF19995.102Pongo_abelii
ENSPKIG00000007204srsf1a9995.102ENSPCAG00000005199SRSF19995.102Procavia_capensis
ENSPKIG00000007204srsf1a8474.242ENSPCOG00000025736-9474.479Propithecus_coquereli
ENSPKIG00000007204srsf1a9995.102ENSPCOG00000023654-9995.102Propithecus_coquereli
ENSPKIG00000007204srsf1a7498.361ENSPVAG00000000519-7398.361Pteropus_vampyrus
ENSPKIG00000007204srsf1a9693.590ENSPNAG00000022241srsf1a7992.784Pygocentrus_nattereri
ENSPKIG00000007204srsf1a9995.062ENSPNAG00000014601srsf1b9995.062Pygocentrus_nattereri
ENSPKIG00000007204srsf1a9995.102ENSRNOG00000050323Srsf19995.102Rattus_norvegicus
ENSPKIG00000007204srsf1a9895.062ENSRBIG00000034445-9695.062Rhinopithecus_bieti
ENSPKIG00000007204srsf1a9995.102ENSRROG00000041506-9995.102Rhinopithecus_roxellana
ENSPKIG00000007204srsf1a9995.102ENSSBOG00000025377-9995.102Saimiri_boliviensis_boliviensis
ENSPKIG00000007204srsf1a9995.122ENSSHAG00000002552-9995.122Sarcophilus_harrisii
ENSPKIG00000007204srsf1a9997.531ENSSFOG00015004800srsf1a9897.531Scleropages_formosus
ENSPKIG00000007204srsf1a9386.441ENSSMAG00000009719-7985.572Scophthalmus_maximus
ENSPKIG00000007204srsf1a8391.667ENSSMAG00000007018-7891.667Scophthalmus_maximus
ENSPKIG00000007204srsf1a9980.687ENSSDUG00000003929-8282.741Seriola_dumerili
ENSPKIG00000007204srsf1a8392.188ENSSDUG00000011303-8392.188Seriola_dumerili
ENSPKIG00000007204srsf1a8378.646ENSSLDG00000016868-8781.106Seriola_lalandi_dorsalis
ENSPKIG00000007204srsf1a8392.188ENSSLDG00000010543-7892.188Seriola_lalandi_dorsalis
ENSPKIG00000007204srsf1a9775.983ENSSLDG00000016895-7985.027Seriola_lalandi_dorsalis
ENSPKIG00000007204srsf1a7795.556ENSSARG00000010949-6295.556Sorex_araneus
ENSPKIG00000007204srsf1a9896.296ENSSPUG00000000804-9696.296Sphenodon_punctatus
ENSPKIG00000007204srsf1a8391.710ENSSPAG00000022562-7890.674Stegastes_partitus
ENSPKIG00000007204srsf1a8385.437ENSSPAG00000014152-8084.951Stegastes_partitus
ENSPKIG00000007204srsf1a9995.102ENSSSCG00000017626-9995.102Sus_scrofa
ENSPKIG00000007204srsf1a7496.196ENSTGUG00000008416-10096.196Taeniopygia_guttata
ENSPKIG00000007204srsf1a8390.625ENSTRUG00000003691srsf1a7890.625Takifugu_rubripes
ENSPKIG00000007204srsf1a8390.625ENSTNIG00000016223srsf1a7890.625Tetraodon_nigroviridis
ENSPKIG00000007204srsf1a7790.556ENSTBEG00000015378-6291.713Tupaia_belangeri
ENSPKIG00000007204srsf1a5689.394ENSTTRG00000007310SRSF17291.667Tursiops_truncatus
ENSPKIG00000007204srsf1a9995.102ENSUAMG00000009858SRSF19995.102Ursus_americanus
ENSPKIG00000007204srsf1a9895.062ENSUMAG00000000455-9695.062Ursus_maritimus
ENSPKIG00000007204srsf1a8391.710ENSVPAG00000010094SRSF17892.784Vicugna_pacos
ENSPKIG00000007204srsf1a9895.062ENSVVUG00000011882-9695.062Vulpes_vulpes
ENSPKIG00000007204srsf1a8394.764ENSXETG00000008954srsf18084.507Xenopus_tropicalis
ENSPKIG00000007204srsf1a8391.146ENSXMAG00000011766srsf1a7891.146Xiphophorus_maculatus

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