EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007228 (Gene tree)
Gene ID: 111842702
Gene Symbol: prdm12b
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 5151 bases
Position: chrPGUA01000095.1:296026-301176
Accession: 111842702
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023713	zf-C2H2	PF00096.26	3.4e-12	1	2
ENSPKIP00000023713	zf-C2H2	PF00096.26	3.4e-12	2	2
ENSPKIP00000023713	zf-met	PF12874.7	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000004401	-	2727	-	ENSPKIP00000023713	372 (aa)	XP_023665372	UPI000CD60FA2

Gene Model

Click here to download ENSPKIG00000007228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007228's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007228	prdm12b	68	41.509	ENSPKIG00000015492	prdm5	83	41.509
ENSPKIG00000007228	prdm12b	90	85.075	ENSPKIG00000004305	PRDM12	94	84.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007228	prdm12b	94	85.057	ENSG00000130711	PRDM12	99	79.790	Homo_sapiens
ENSPKIG00000007228	prdm12b	100	70.667	ENSAPOG00000018234	-	100	70.933	Acanthochromis_polyacanthus
ENSPKIG00000007228	prdm12b	100	83.594	ENSAPOG00000016051	prdm12b	100	82.812	Acanthochromis_polyacanthus
ENSPKIG00000007228	prdm12b	90	84.431	ENSAMEG00000016234	PRDM12	99	83.832	Ailuropoda_melanoleuca
ENSPKIG00000007228	prdm12b	100	85.979	ENSACIG00000019578	prdm12b	100	85.714	Amphilophus_citrinellus
ENSPKIG00000007228	prdm12b	100	81.443	ENSACIG00000005193	-	100	81.818	Amphilophus_citrinellus
ENSPKIG00000007228	prdm12b	100	84.211	ENSAOCG00000015040	prdm12b	100	83.421	Amphiprion_ocellaris
ENSPKIG00000007228	prdm12b	100	72.774	ENSAPEG00000022849	-	99	74.555	Amphiprion_percula
ENSPKIG00000007228	prdm12b	100	84.615	ENSAPEG00000015092	prdm12b	100	84.085	Amphiprion_percula
ENSPKIG00000007228	prdm12b	100	82.597	ENSATEG00000014595	-	100	84.675	Anabas_testudineus
ENSPKIG00000007228	prdm12b	95	84.943	ENSANAG00000020616	PRDM12	98	85.057	Aotus_nancymaae
ENSPKIG00000007228	prdm12b	100	81.818	ENSACLG00000011876	prdm12b	100	81.818	Astatotilapia_calliptera
ENSPKIG00000007228	prdm12b	100	78.589	ENSACLG00000007631	-	100	79.345	Astatotilapia_calliptera
ENSPKIG00000007228	prdm12b	100	86.400	ENSAMXG00000033665	prdm12b	100	87.200	Astyanax_mexicanus
ENSPKIG00000007228	prdm12b	100	81.867	ENSAMXG00000008540	PRDM12	100	80.585	Astyanax_mexicanus
ENSPKIG00000007228	prdm12b	94	85.632	ENSBTAG00000023797	PRDM12	99	82.133	Bos_taurus
ENSPKIG00000007228	prdm12b	94	85.345	ENSCJAG00000020540	PRDM12	99	81.551	Callithrix_jacchus
ENSPKIG00000007228	prdm12b	82	85.621	ENSCAFG00000023076	PRDM12	99	80.060	Canis_familiaris
ENSPKIG00000007228	prdm12b	94	85.632	ENSCAFG00020024046	PRDM12	99	80.688	Canis_lupus_dingo
ENSPKIG00000007228	prdm12b	94	85.632	ENSCHIG00000025005	PRDM12	99	81.383	Capra_hircus
ENSPKIG00000007228	prdm12b	87	85.759	ENSCPOG00000005901	PRDM12	95	85.759	Cavia_porcellus
ENSPKIG00000007228	prdm12b	94	85.345	ENSCCAG00000037485	PRDM12	99	80.902	Cebus_capucinus
ENSPKIG00000007228	prdm12b	94	85.345	ENSCATG00000020327	PRDM12	99	80.902	Cercocebus_atys
ENSPKIG00000007228	prdm12b	94	84.770	ENSCLAG00000005499	PRDM12	91	84.770	Chinchilla_lanigera
ENSPKIG00000007228	prdm12b	94	85.345	ENSCSAG00000014756	PRDM12	99	80.423	Chlorocebus_sabaeus
ENSPKIG00000007228	prdm12b	100	84.946	ENSCPBG00000022628	PRDM12	99	84.677	Chrysemys_picta_bellii
ENSPKIG00000007228	prdm12b	94	85.345	ENSCGRG00001015005	Prdm12	99	80.263	Cricetulus_griseus_chok1gshd
ENSPKIG00000007228	prdm12b	100	80.256	ENSCVAG00000000944	-	100	81.282	Cyprinodon_variegatus
ENSPKIG00000007228	prdm12b	100	84.409	ENSCVAG00000017166	prdm12b	100	85.215	Cyprinodon_variegatus
ENSPKIG00000007228	prdm12b	100	90.860	ENSDARG00000007430	prdm12b	100	90.860	Danio_rerio
ENSPKIG00000007228	prdm12b	93	85.100	ENSDNOG00000042302	PRDM12	99	81.383	Dasypus_novemcinctus
ENSPKIG00000007228	prdm12b	91	63.380	ENSEBUG00000016780	prdm12b	84	61.741	Eptatretus_burgeri
ENSPKIG00000007228	prdm12b	95	84.943	ENSEASG00005008472	PRDM12	99	81.117	Equus_asinus_asinus
ENSPKIG00000007228	prdm12b	95	84.659	ENSECAG00000005933	PRDM12	99	80.851	Equus_caballus
ENSPKIG00000007228	prdm12b	100	83.598	ENSELUG00000013674	PRDM12	100	84.881	Esox_lucius
ENSPKIG00000007228	prdm12b	100	90.374	ENSELUG00000009905	prdm12b	100	90.374	Esox_lucius
ENSPKIG00000007228	prdm12b	94	85.632	ENSFCAG00000043086	PRDM12	99	81.167	Felis_catus
ENSPKIG00000007228	prdm12b	100	85.215	ENSFALG00000001445	PRDM12	89	84.946	Ficedula_albicollis
ENSPKIG00000007228	prdm12b	100	77.582	ENSFHEG00000007746	-	100	77.582	Fundulus_heteroclitus
ENSPKIG00000007228	prdm12b	100	84.000	ENSFHEG00000003944	prdm12b	100	84.000	Fundulus_heteroclitus
ENSPKIG00000007228	prdm12b	100	82.804	ENSGMOG00000011797	prdm12b	100	81.481	Gadus_morhua
ENSPKIG00000007228	prdm12b	100	85.215	ENSGALG00000003895	PRDM12	99	84.946	Gallus_gallus
ENSPKIG00000007228	prdm12b	100	82.804	ENSGAFG00000010827	prdm12b	99	82.804	Gambusia_affinis
ENSPKIG00000007228	prdm12b	100	83.155	ENSGACG00000016713	prdm12b	99	82.038	Gasterosteus_aculeatus
ENSPKIG00000007228	prdm12b	100	84.946	ENSGAGG00000014083	PRDM12	99	84.677	Gopherus_agassizii
ENSPKIG00000007228	prdm12b	94	84.770	ENSGGOG00000010568	PRDM12	99	79.737	Gorilla_gorilla
ENSPKIG00000007228	prdm12b	100	84.840	ENSHBUG00000022878	prdm12b	100	84.840	Haplochromis_burtoni
ENSPKIG00000007228	prdm12b	100	78.589	ENSHBUG00000022537	-	93	79.345	Haplochromis_burtoni
ENSPKIG00000007228	prdm12b	91	85.546	ENSHGLG00000013939	PRDM12	99	80.267	Heterocephalus_glaber_female
ENSPKIG00000007228	prdm12b	90	83.918	ENSHCOG00000003663	prdm12b	100	76.786	Hippocampus_comes
ENSPKIG00000007228	prdm12b	100	73.753	ENSHCOG00000021167	-	100	73.228	Hippocampus_comes
ENSPKIG00000007228	prdm12b	100	78.820	ENSIPUG00000019544	PRDM12	100	78.495	Ictalurus_punctatus
ENSPKIG00000007228	prdm12b	100	88.740	ENSIPUG00000017053	prdm12b	100	89.008	Ictalurus_punctatus
ENSPKIG00000007228	prdm12b	97	83.611	ENSSTOG00000005986	PRDM12	87	85.057	Ictidomys_tridecemlineatus
ENSPKIG00000007228	prdm12b	92	85.044	ENSJJAG00000005424	Prdm12	99	85.841	Jaculus_jaculus
ENSPKIG00000007228	prdm12b	99	78.400	ENSKMAG00000021205	-	99	77.867	Kryptolebias_marmoratus
ENSPKIG00000007228	prdm12b	100	77.970	ENSKMAG00000016921	prdm12b	100	78.218	Kryptolebias_marmoratus
ENSPKIG00000007228	prdm12b	100	84.211	ENSLBEG00000007776	-	100	84.211	Labrus_bergylta
ENSPKIG00000007228	prdm12b	100	82.322	ENSLBEG00000017769	prdm12b	100	81.530	Labrus_bergylta
ENSPKIG00000007228	prdm12b	100	86.290	ENSLACG00000017560	PRDM12	99	85.753	Latimeria_chalumnae
ENSPKIG00000007228	prdm12b	100	91.667	ENSLOCG00000005429	prdm12b	100	91.579	Lepisosteus_oculatus
ENSPKIG00000007228	prdm12b	94	83.853	ENSLAFG00000006979	PRDM12	91	83.853	Loxodonta_africana
ENSPKIG00000007228	prdm12b	94	85.345	ENSMFAG00000040322	PRDM12	99	80.157	Macaca_fascicularis
ENSPKIG00000007228	prdm12b	94	85.345	ENSMNEG00000037234	PRDM12	99	80.902	Macaca_nemestrina
ENSPKIG00000007228	prdm12b	100	85.067	ENSMAMG00000013212	prdm12b	100	85.067	Mastacembelus_armatus
ENSPKIG00000007228	prdm12b	100	76.441	ENSMAMG00000018988	-	100	77.444	Mastacembelus_armatus
ENSPKIG00000007228	prdm12b	100	78.195	ENSMZEG00005000415	PRDM12	100	78.947	Maylandia_zebra
ENSPKIG00000007228	prdm12b	98	84.973	ENSMGAG00000005438	PRDM12	98	84.699	Meleagris_gallopavo
ENSPKIG00000007228	prdm12b	100	80.418	ENSMAUG00000013040	Prdm12	99	80.739	Mesocricetus_auratus
ENSPKIG00000007228	prdm12b	95	85.227	ENSMICG00000015480	PRDM12	99	80.526	Microcebus_murinus
ENSPKIG00000007228	prdm12b	99	82.162	ENSMOCG00000021026	Prdm12	91	85.345	Microtus_ochrogaster
ENSPKIG00000007228	prdm12b	100	84.450	ENSMODG00000012108	PRDM12	99	84.182	Monodelphis_domestica
ENSPKIG00000007228	prdm12b	100	70.856	ENSMALG00000021901	prdm12b	99	69.705	Monopterus_albus
ENSPKIG00000007228	prdm12b	94	85.057	MGP_CAROLIEiJ_G0023414	Prdm12	99	80.475	Mus_caroli
ENSPKIG00000007228	prdm12b	94	85.057	ENSMUSG00000079466	Prdm12	99	80.475	Mus_musculus
ENSPKIG00000007228	prdm12b	94	85.057	MGP_PahariEiJ_G0024871	Prdm12	99	80.475	Mus_pahari
ENSPKIG00000007228	prdm12b	94	85.057	MGP_SPRETEiJ_G0024331	Prdm12	99	80.475	Mus_spretus
ENSPKIG00000007228	prdm12b	90	86.269	ENSNGAG00000018480	Prdm12	99	80.376	Nannospalax_galili
ENSPKIG00000007228	prdm12b	100	75.131	ENSNBRG00000024312	-	100	75.654	Neolamprologus_brichardi
ENSPKIG00000007228	prdm12b	100	84.697	ENSNBRG00000006727	prdm12b	100	84.433	Neolamprologus_brichardi
ENSPKIG00000007228	prdm12b	100	75.871	ENSMEUG00000003828	PRDM12	99	75.603	Notamacropus_eugenii
ENSPKIG00000007228	prdm12b	91	85.546	ENSOPRG00000008680	PRDM12	99	85.546	Ochotona_princeps
ENSPKIG00000007228	prdm12b	97	83.889	ENSODEG00000016282	PRDM12	62	85.057	Octodon_degus
ENSPKIG00000007228	prdm12b	63	82.203	ENSOANG00000001043	PRDM12	100	81.780	Ornithorhynchus_anatinus
ENSPKIG00000007228	prdm12b	83	85.161	ENSOCUG00000008241	PRDM12	96	85.161	Oryctolagus_cuniculus
ENSPKIG00000007228	prdm12b	100	81.481	ENSORLG00000007114	prdm12b	99	81.746	Oryzias_latipes
ENSPKIG00000007228	prdm12b	100	81.026	ENSORLG00000017558	-	100	82.308	Oryzias_latipes
ENSPKIG00000007228	prdm12b	100	81.316	ENSORLG00020019565	prdm12b	99	81.579	Oryzias_latipes_hni
ENSPKIG00000007228	prdm12b	100	80.563	ENSORLG00020013167	-	100	82.097	Oryzias_latipes_hni
ENSPKIG00000007228	prdm12b	100	81.746	ENSORLG00015007621	prdm12b	99	82.275	Oryzias_latipes_hsok
ENSPKIG00000007228	prdm12b	100	80.769	ENSORLG00015003435	-	100	82.051	Oryzias_latipes_hsok
ENSPKIG00000007228	prdm12b	100	81.510	ENSOMEG00000007762	-	100	81.771	Oryzias_melastigma
ENSPKIG00000007228	prdm12b	100	81.723	ENSOMEG00000004134	prdm12b	99	81.723	Oryzias_melastigma
ENSPKIG00000007228	prdm12b	93	85.591	ENSOGAG00000007557	PRDM12	99	85.591	Otolemur_garnettii
ENSPKIG00000007228	prdm12b	81	83.168	ENSPPAG00000031506	-	99	83.168	Pan_paniscus
ENSPKIG00000007228	prdm12b	100	75.871	ENSPPRG00000023024	PRDM12	92	75.603	Panthera_pardus
ENSPKIG00000007228	prdm12b	94	85.057	ENSPTRG00000043324	-	99	80.000	Pan_troglodytes
ENSPKIG00000007228	prdm12b	94	85.057	ENSPTRG00000021475	PRDM12	99	80.000	Pan_troglodytes
ENSPKIG00000007228	prdm12b	94	85.345	ENSPANG00000025967	PRDM12	99	80.902	Papio_anubis
ENSPKIG00000007228	prdm12b	100	84.140	ENSPSIG00000006739	PRDM12	99	83.871	Pelodiscus_sinensis
ENSPKIG00000007228	prdm12b	100	82.353	ENSPMGG00000008867	prdm12b	99	82.888	Periophthalmus_magnuspinnatus
ENSPKIG00000007228	prdm12b	100	75.635	ENSPMGG00000002356	-	100	76.142	Periophthalmus_magnuspinnatus
ENSPKIG00000007228	prdm12b	98	81.868	ENSPEMG00000009969	Prdm12	90	86.136	Peromyscus_maniculatus_bairdii
ENSPKIG00000007228	prdm12b	100	84.450	ENSPCIG00000024119	PRDM12	99	84.182	Phascolarctos_cinereus
ENSPKIG00000007228	prdm12b	100	83.777	ENSPFOG00000019841	prdm12b	100	83.690	Poecilia_formosa
ENSPKIG00000007228	prdm12b	100	81.890	ENSPLAG00000016626	prdm12b	99	82.152	Poecilia_latipinna
ENSPKIG00000007228	prdm12b	98	81.452	ENSPMEG00000016698	prdm12b	100	81.720	Poecilia_mexicana
ENSPKIG00000007228	prdm12b	95	75.967	ENSPREG00000003211	-	94	75.967	Poecilia_reticulata
ENSPKIG00000007228	prdm12b	100	82.199	ENSPREG00000015073	prdm12b	99	82.199	Poecilia_reticulata
ENSPKIG00000007228	prdm12b	96	83.193	ENSPPYG00000019694	PRDM12	93	85.799	Pongo_abelii
ENSPKIG00000007228	prdm12b	94	85.632	ENSPCOG00000022255	PRDM12	99	80.526	Propithecus_coquereli
ENSPKIG00000007228	prdm12b	94	85.632	ENSPVAG00000001511	PRDM12	99	80.526	Pteropus_vampyrus
ENSPKIG00000007228	prdm12b	100	84.392	ENSPNYG00000009607	prdm12b	100	84.921	Pundamilia_nyererei
ENSPKIG00000007228	prdm12b	100	78.195	ENSPNYG00000013589	-	100	78.947	Pundamilia_nyererei
ENSPKIG00000007228	prdm12b	100	76.702	ENSPNAG00000013396	PRDM12	100	76.702	Pygocentrus_nattereri
ENSPKIG00000007228	prdm12b	100	87.936	ENSPNAG00000024532	prdm12b	100	89.008	Pygocentrus_nattereri
ENSPKIG00000007228	prdm12b	94	85.057	ENSRNOG00000009218	Prdm12	99	80.475	Rattus_norvegicus
ENSPKIG00000007228	prdm12b	88	86.239	ENSRBIG00000042712	PRDM12	91	83.824	Rhinopithecus_bieti
ENSPKIG00000007228	prdm12b	89	86.405	ENSRROG00000043554	PRDM12	99	86.405	Rhinopithecus_roxellana
ENSPKIG00000007228	prdm12b	100	83.957	ENSSHAG00000015972	PRDM12	99	83.690	Sarcophilus_harrisii
ENSPKIG00000007228	prdm12b	100	81.491	ENSSMAG00000003754	prdm12b	100	81.491	Scophthalmus_maximus
ENSPKIG00000007228	prdm12b	100	83.636	ENSSDUG00000023498	prdm12b	100	82.292	Seriola_dumerili
ENSPKIG00000007228	prdm12b	100	84.073	ENSSDUG00000019071	-	100	84.073	Seriola_dumerili
ENSPKIG00000007228	prdm12b	100	84.293	ENSSLDG00000009557	prdm12b	100	83.202	Seriola_lalandi_dorsalis
ENSPKIG00000007228	prdm12b	100	80.429	ENSSLDG00000013562	-	100	80.161	Seriola_lalandi_dorsalis
ENSPKIG00000007228	prdm12b	100	84.677	ENSSPUG00000013424	PRDM12	99	84.409	Sphenodon_punctatus
ENSPKIG00000007228	prdm12b	100	74.160	ENSSPAG00000022420	-	100	74.872	Stegastes_partitus
ENSPKIG00000007228	prdm12b	100	83.202	ENSSPAG00000018824	prdm12b	100	82.677	Stegastes_partitus
ENSPKIG00000007228	prdm12b	94	85.632	ENSSSCG00000005703	PRDM12	99	80.688	Sus_scrofa
ENSPKIG00000007228	prdm12b	100	82.933	ENSTRUG00000018659	prdm12b	100	82.667	Takifugu_rubripes
ENSPKIG00000007228	prdm12b	100	80.106	ENSTRUG00000013239	-	100	80.000	Takifugu_rubripes
ENSPKIG00000007228	prdm12b	100	75.266	ENSTNIG00000005859	-	99	74.468	Tetraodon_nigroviridis
ENSPKIG00000007228	prdm12b	100	82.667	ENSTNIG00000009020	prdm12b	99	82.400	Tetraodon_nigroviridis
ENSPKIG00000007228	prdm12b	94	85.632	ENSUAMG00000009653	PRDM12	92	85.345	Ursus_americanus
ENSPKIG00000007228	prdm12b	91	86.431	ENSVVUG00000027662	PRDM12	78	86.431	Vulpes_vulpes
ENSPKIG00000007228	prdm12b	100	83.511	ENSXCOG00000002836	prdm12b	99	83.511	Xiphophorus_couchianus
ENSPKIG00000007228	prdm12b	100	83.777	ENSXMAG00000005537	prdm12b	100	83.777	Xiphophorus_maculatus
ENSPKIG00000007228	prdm12b	100	78.500	ENSXMAG00000028012	-	100	79.500	Xiphophorus_maculatus