EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007274 (Gene tree)
Gene ID: 111839491
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein lark-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 1047 bases
Position: chrPGUA01000072.1:2422655-2423701
Accession: 111839491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023764	RRM_5	PF13893.6	3.2e-08	1	2
ENSPKIP00000023764	RRM_5	PF13893.6	3.2e-08	2	2
ENSPKIP00000023764	RRM_1	PF00076.22	3.6e-34	1	2
ENSPKIP00000023764	RRM_1	PF00076.22	3.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000004453	-	1047	-	ENSPKIP00000023764	348 (aa)	XP_023659209	UPI000CD667BC

Gene Model

Click here to download ENSPKIG00000007274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007274	-	54	41.176	ENSPKIG00000007001	rbm4.3	67	42.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007274	-	61	37.915	ENSAMXG00000040224	rbm4.3	66	42.236	Astyanax_mexicanus
ENSPKIG00000007274	-	100	69.828	ENSAMXG00000025173	-	100	74.425	Astyanax_mexicanus
ENSPKIG00000007274	-	57	42.714	ENSLBEG00000001025	rbm4.3	67	45.946	Labrus_bergylta
ENSPKIG00000007274	-	66	37.450	ENSPLAG00000006077	rbm4.3	64	38.017	Poecilia_latipinna
ENSPKIG00000007274	-	100	73.276	ENSPNAG00000012130	-	100	76.437	Pygocentrus_nattereri