EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000007322 (Gene tree)
Gene ID
111844682
Gene Symbol
pabpc1l
Alias
-
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Plus strand
Length
13566 bases
Position
chrPGUA01000138.1:1461266-1474831
Accession
111844682
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000023920PABPPF00658.182.6e-2911
ENSPKIP00000023901PABPPF00658.182.8e-2911
ENSPKIP00000023955PABPPF00658.186.8e-2611
ENSPKIP00000023920RRM_5PF13893.63.2e-0812
ENSPKIP00000023920RRM_5PF13893.63.2e-0822
ENSPKIP00000023981RRM_5PF13893.66.8e-0812
ENSPKIP00000023981RRM_5PF13893.66.8e-0822
ENSPKIP00000023955RRM_5PF13893.68.9e-0812
ENSPKIP00000023955RRM_5PF13893.68.9e-0822
ENSPKIP00000023901RRM_5PF13893.69.3e-0812
ENSPKIP00000023901RRM_5PF13893.69.3e-0822
ENSPKIP00000023981RRM_1PF00076.229.8e-9014
ENSPKIP00000023981RRM_1PF00076.229.8e-9024
ENSPKIP00000023981RRM_1PF00076.229.8e-9034
ENSPKIP00000023981RRM_1PF00076.229.8e-9044
ENSPKIP00000023955RRM_1PF00076.221.2e-8914
ENSPKIP00000023955RRM_1PF00076.221.2e-8924
ENSPKIP00000023955RRM_1PF00076.221.2e-8934
ENSPKIP00000023955RRM_1PF00076.221.2e-8944
ENSPKIP00000023901RRM_1PF00076.221.3e-8914
ENSPKIP00000023901RRM_1PF00076.221.3e-8924
ENSPKIP00000023901RRM_1PF00076.221.3e-8934
ENSPKIP00000023901RRM_1PF00076.221.3e-8944
ENSPKIP00000023920RRM_1PF00076.221.7e-8914
ENSPKIP00000023920RRM_1PF00076.221.7e-8924
ENSPKIP00000023920RRM_1PF00076.221.7e-8934
ENSPKIP00000023920RRM_1PF00076.221.7e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000004680-1857-ENSPKIP00000023981614 (aa)--
ENSPKIT00000004653-1937-ENSPKIP00000023955641 (aa)--
ENSPKIT00000004616-2220XM_023813370ENSPKIP00000023920624 (aa)XP_023669138UPI000CD5FEE7
ENSPKIT00000004596-2307XM_023813366ENSPKIP00000023901653 (aa)XP_023669134UPI000CD6501F
Gene Model
Click here to download ENSPKIG00000007322's gene model file
Pathways
Pathway IDPathway NameSource
pki03013RNA transportKEGG
pki03015mRNA surveillance pathwayKEGG
pki03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007322's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000007322pabpc1l5937.209ENSPKIG00000004198si:dkey-205h23.29234.737
ENSPKIG00000007322pabpc1l6336.145ENSPKIG00000006187ELAVL28436.145
ENSPKIG00000007322pabpc1l6336.145ENSPKIG00000001903-8936.145
ENSPKIG00000007322pabpc1l5766.406ENSPKIG00000002089-8866.406
ENSPKIG00000007322pabpc1l6236.145ENSPKIG00000016207elavl39036.145
ENSPKIG00000007322pabpc1l5037.209ENSPKIG00000019554-6537.209
ENSPKIG00000007322pabpc1l7665.272ENSPKIG00000016835-9765.272
ENSPKIG00000007322pabpc1l10069.401ENSPKIG00000025356pabpc49869.919
ENSPKIG00000007322pabpc1l6445.783ENSPKIG00000007461-9045.783
ENSPKIG00000007322pabpc1l6532.941ENSPKIG00000002604ncl5230.348
ENSPKIG00000007322pabpc1l6238.372ENSPKIG00000010998celf5a8235.211
ENSPKIG00000007322pabpc1l5881.679ENSPKIG00000016810-9281.679
ENSPKIG00000007322pabpc1l5530.857ENSPKIG00000004295puf60a5330.857
ENSPKIG00000007322pabpc1l7131.081ENSPKIG00000025176a1cf6031.081
ENSPKIG00000007322pabpc1l5530.857ENSPKIG00000012204puf60b5530.857
ENSPKIG00000007322pabpc1l9974.881ENSPKIG00000005676pabpc1b9875.040
ENSPKIG00000007322pabpc1l5534.146ENSPKIG00000020270HNRNPA06330.303
ENSPKIG00000007322pabpc1l5766.406ENSPKIG00000002905-8866.406
ENSPKIG00000007322pabpc1l6234.940ENSPKIG00000006999elavl48634.940
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000007322pabpc1l9970.853ENSG00000101104PABPC1L9878.704Homo_sapiens
ENSPKIG00000007322pabpc1l9975.484ENSAPOG00000010842pabpc1l9975.484Acanthochromis_polyacanthus
ENSPKIG00000007322pabpc1l9965.891ENSAMEG00000004099PABPC1L10066.102Ailuropoda_melanoleuca
ENSPKIG00000007322pabpc1l9981.818ENSACIG00000021004-10081.818Amphilophus_citrinellus
ENSPKIG00000007322pabpc1l10076.312ENSAOCG00000006167-10076.312Amphiprion_ocellaris
ENSPKIG00000007322pabpc1l10076.603ENSAPEG00000010558-9984.862Amphiprion_percula
ENSPKIG00000007322pabpc1l10079.904ENSATEG00000007428pabpc1l10080.223Anabas_testudineus
ENSPKIG00000007322pabpc1l9874.637ENSAPLG00000008415PABPC1L9974.718Anas_platyrhynchos
ENSPKIG00000007322pabpc1l9976.997ENSACAG00000011841PABPC1L9876.997Anolis_carolinensis
ENSPKIG00000007322pabpc1l9969.984ENSANAG00000026826PABPC1L9969.984Aotus_nancymaae
ENSPKIG00000007322pabpc1l10079.048ENSACLG00000024791pabpc1l10079.048Astatotilapia_calliptera
ENSPKIG00000007322pabpc1l10083.307ENSAMXG00000013552pabpc1l10083.307Astyanax_mexicanus
ENSPKIG00000007322pabpc1l6667.647ENSBTAG00000016849PABPC1L8267.647Bos_taurus
ENSPKIG00000007322pabpc1l6885.119ENSBTAG00000055300-10085.119Bos_taurus
ENSPKIG00000007322pabpc1l9970.465ENSCJAG00000017628PABPC1L9970.465Callithrix_jacchus
ENSPKIG00000007322pabpc1l6477.326ENSCJAG00000038506-10078.161Callithrix_jacchus
ENSPKIG00000007322pabpc1l9963.775ENSCAFG00000009573PABPC1L10063.775Canis_familiaris
ENSPKIG00000007322pabpc1l9970.080ENSCAFG00020013828PABPC1L9970.080Canis_lupus_dingo
ENSPKIG00000007322pabpc1l9870.376ENSCHIG00000025759PABPC1L9170.376Capra_hircus
ENSPKIG00000007322pabpc1l9970.257ENSTSYG00000006645PABPC1L9970.257Carlito_syrichta
ENSPKIG00000007322pabpc1l9864.209ENSCAPG00000014519PABPC1L9964.209Cavia_aperea
ENSPKIG00000007322pabpc1l9966.879ENSCPOG00000013633PABPC1L9966.879Cavia_porcellus
ENSPKIG00000007322pabpc1l9970.257ENSCCAG00000023338PABPC1L9970.740Cebus_capucinus
ENSPKIG00000007322pabpc1l9971.014ENSCATG00000034065PABPC1L9971.543Cercocebus_atys
ENSPKIG00000007322pabpc1l9967.200ENSCLAG00000005298PABPC1L9967.840Chinchilla_lanigera
ENSPKIG00000007322pabpc1l9970.853ENSCSAG00000014242PABPC1L9971.383Chlorocebus_sabaeus
ENSPKIG00000007322pabpc1l7182.353ENSCPBG00000017755-9982.353Chrysemys_picta_bellii
ENSPKIG00000007322pabpc1l5875.000ENSCPBG00000007810-9175.000Chrysemys_picta_bellii
ENSPKIG00000007322pabpc1l8763.810ENSCING00000002796-9752.590Ciona_intestinalis
ENSPKIG00000007322pabpc1l9958.202ENSCSAVG00000003102-10082.550Ciona_savignyi
ENSPKIG00000007322pabpc1l9965.668ENSCSAVG00000004246-8972.143Ciona_savignyi
ENSPKIG00000007322pabpc1l9966.984ENSCANG00000037530PABPC1L9967.405Colobus_angolensis_palliatus
ENSPKIG00000007322pabpc1l9963.622ENSCGRG00001021938Pabpc1l9963.622Cricetulus_griseus_chok1gshd
ENSPKIG00000007322pabpc1l9963.622ENSCGRG00000007946Pabpc1l9963.622Cricetulus_griseus_crigri
ENSPKIG00000007322pabpc1l10071.635ENSCSEG00000021295pabpc1l10071.635Cynoglossus_semilaevis
ENSPKIG00000007322pabpc1l10078.115ENSCVAG00000015943-9993.130Cyprinodon_variegatus
ENSPKIG00000007322pabpc1l9982.907ENSDARG00000002597pabpc1l10081.947Danio_rerio
ENSPKIG00000007322pabpc1l9972.669ENSDNOG00000048450PABPC1L9972.669Dasypus_novemcinctus
ENSPKIG00000007322pabpc1l9968.910ENSDORG00000001067Pabpc1l9968.910Dipodomys_ordii
ENSPKIG00000007322pabpc1l9778.049ENSETEG00000009969PABPC1L7178.049Echinops_telfairi
ENSPKIG00000007322pabpc1l6883.333ENSEASG00005023408-10083.333Equus_asinus_asinus
ENSPKIG00000007322pabpc1l5378.261ENSEASG00005023407-6578.261Equus_asinus_asinus
ENSPKIG00000007322pabpc1l7270.168ENSECAG00000040139-8570.168Equus_caballus
ENSPKIG00000007322pabpc1l9968.921ENSEEUG00000005978PABPC1L9968.921Erinaceus_europaeus
ENSPKIG00000007322pabpc1l10083.333ENSELUG00000001811pabpc1l10083.333Esox_lucius
ENSPKIG00000007322pabpc1l9971.360ENSFCAG00000011692PABPC1L9971.360Felis_catus
ENSPKIG00000007322pabpc1l9073.381ENSFALG00000005372PABPC1L8977.419Ficedula_albicollis
ENSPKIG00000007322pabpc1l9966.559ENSFDAG00000008291PABPC1L9966.720Fukomys_damarensis
ENSPKIG00000007322pabpc1l10079.647ENSFHEG00000003398pabpc1l10079.647Fundulus_heteroclitus
ENSPKIG00000007322pabpc1l9979.388ENSGMOG00000004437pabpc1l9979.388Gadus_morhua
ENSPKIG00000007322pabpc1l8482.222ENSGALG00000004123PABPC1L9883.535Gallus_gallus
ENSPKIG00000007322pabpc1l10074.773ENSGAFG00000021057pabpc1l10074.773Gambusia_affinis
ENSPKIG00000007322pabpc1l9978.628ENSGACG00000002792pabpc1l10078.628Gasterosteus_aculeatus
ENSPKIG00000007322pabpc1l9977.671ENSGAGG00000000589PABPC1L9485.870Gopherus_agassizii
ENSPKIG00000007322pabpc1l9971.337ENSGGOG00000004584PABPC1L9971.543Gorilla_gorilla
ENSPKIG00000007322pabpc1l10079.048ENSHBUG00000006134pabpc1l10079.048Haplochromis_burtoni
ENSPKIG00000007322pabpc1l9967.840ENSHGLG00000008434PABPC1L9968.000Heterocephalus_glaber_female
ENSPKIG00000007322pabpc1l5884.615ENSHGLG00100019506-10084.615Heterocephalus_glaber_male
ENSPKIG00000007322pabpc1l9967.840ENSHGLG00100012151PABPC1L9968.000Heterocephalus_glaber_male
ENSPKIG00000007322pabpc1l9976.987ENSHCOG00000009270pabpc1l10076.987Hippocampus_comes
ENSPKIG00000007322pabpc1l5959.487ENSIPUG00000006780-9459.487Ictalurus_punctatus
ENSPKIG00000007322pabpc1l5862.644ENSIPUG00000006760-8862.644Ictalurus_punctatus
ENSPKIG00000007322pabpc1l10082.884ENSIPUG00000012602pabpc1l10082.884Ictalurus_punctatus
ENSPKIG00000007322pabpc1l9970.900ENSSTOG00000003739PABPC1L9970.900Ictidomys_tridecemlineatus
ENSPKIG00000007322pabpc1l9955.296ENSJJAG00000022406Pabpc1l9953.418Jaculus_jaculus
ENSPKIG00000007322pabpc1l9979.516ENSKMAG00000016847pabpc1l9979.516Kryptolebias_marmoratus
ENSPKIG00000007322pabpc1l10078.855ENSLBEG00000010084pabpc1l10078.855Labrus_bergylta
ENSPKIG00000007322pabpc1l9975.158ENSLACG00000005762PABPC1L9976.937Latimeria_chalumnae
ENSPKIG00000007322pabpc1l9988.019ENSLOCG00000007519pabpc1l9988.019Lepisosteus_oculatus
ENSPKIG00000007322pabpc1l9970.541ENSLAFG00000003553PABPC1L10070.541Loxodonta_africana
ENSPKIG00000007322pabpc1l9971.014ENSMFAG00000040365PABPC1L9971.543Macaca_fascicularis
ENSPKIG00000007322pabpc1l9969.726ENSMNEG00000032298PABPC1L9970.257Macaca_nemestrina
ENSPKIG00000007322pabpc1l9971.014ENSMLEG00000043139PABPC1L9971.543Mandrillus_leucophaeus
ENSPKIG00000007322pabpc1l9779.669ENSMAMG00000011854pabpc1l9779.669Mastacembelus_armatus
ENSPKIG00000007322pabpc1l10079.048ENSMZEG00005023713pabpc1l10079.048Maylandia_zebra
ENSPKIG00000007322pabpc1l9976.565ENSMGAG00000003674PABPC1L9976.565Meleagris_gallopavo
ENSPKIG00000007322pabpc1l9961.807ENSMOCG00000013186Pabpc1l9961.807Microtus_ochrogaster
ENSPKIG00000007322pabpc1l9978.365ENSMMOG00000020574-9093.077Mola_mola
ENSPKIG00000007322pabpc1l9773.203ENSMODG00000016198PABPC1L9973.203Monodelphis_domestica
ENSPKIG00000007322pabpc1l9778.418ENSMALG00000021622pabpc1l10078.418Monopterus_albus
ENSPKIG00000007322pabpc1l9963.141MGP_CAROLIEiJ_G0024627Pabpc1l9963.141Mus_caroli
ENSPKIG00000007322pabpc1l9963.124ENSMUSG00000054582Pabpc1l9963.124Mus_musculus
ENSPKIG00000007322pabpc1l10063.434MGP_PahariEiJ_G0026071Pabpc1l10063.434Mus_pahari
ENSPKIG00000007322pabpc1l9963.141MGP_SPRETEiJ_G0025549Pabpc1l9963.141Mus_spretus
ENSPKIG00000007322pabpc1l9971.224ENSMPUG00000017646PABPC1L9971.224Mustela_putorius_furo
ENSPKIG00000007322pabpc1l9868.480ENSMLUG00000006324PABPC1L9868.480Myotis_lucifugus
ENSPKIG00000007322pabpc1l9965.224ENSNGAG00000010458Pabpc1l9965.224Nannospalax_galili
ENSPKIG00000007322pabpc1l9983.693ENSNBRG00000016633pabpc1l10083.693Neolamprologus_brichardi
ENSPKIG00000007322pabpc1l9664.636ENSMEUG00000007905-8967.972Notamacropus_eugenii
ENSPKIG00000007322pabpc1l9969.663ENSOPRG00000011846PABPC1L9969.663Ochotona_princeps
ENSPKIG00000007322pabpc1l9963.871ENSODEG00000015482PABPC1L9963.871Octodon_degus
ENSPKIG00000007322pabpc1l6378.750ENSODEG00000002920-9778.750Octodon_degus
ENSPKIG00000007322pabpc1l10079.365ENSONIG00000017314pabpc1l10079.365Oreochromis_niloticus
ENSPKIG00000007322pabpc1l9661.046ENSOANG00000015793-10063.668Ornithorhynchus_anatinus
ENSPKIG00000007322pabpc1l9966.718ENSOCUG00000003005PABPC1L9967.075Oryctolagus_cuniculus
ENSPKIG00000007322pabpc1l10077.083ENSORLG00000010322pabpc1l10085.882Oryzias_latipes
ENSPKIG00000007322pabpc1l10076.763ENSORLG00020021193pabpc1l10085.882Oryzias_latipes_hni
ENSPKIG00000007322pabpc1l10076.923ENSORLG00015017018pabpc1l10084.706Oryzias_latipes_hsok
ENSPKIG00000007322pabpc1l10074.772ENSOMEG00000010789pabpc1l10074.772Oryzias_melastigma
ENSPKIG00000007322pabpc1l9970.701ENSOGAG00000032999PABPC1L9970.701Otolemur_garnettii
ENSPKIG00000007322pabpc1l9970.806ENSOARG00000004578PABPC1L9970.806Ovis_aries
ENSPKIG00000007322pabpc1l9971.014ENSPPAG00000039677PABPC1L9971.429Pan_paniscus
ENSPKIG00000007322pabpc1l6862.890ENSPPRG00000019327-9868.519Panthera_pardus
ENSPKIG00000007322pabpc1l9871.683ENSPTIG00000006524PABPC1L9971.683Panthera_tigris_altaica
ENSPKIG00000007322pabpc1l6279.012ENSPTRG00000013531PABPC1L9879.012Pan_troglodytes
ENSPKIG00000007322pabpc1l9971.014ENSPANG00000018788PABPC1L9971.543Papio_anubis
ENSPKIG00000007322pabpc1l7278.281ENSPSIG00000013289PABPC1L9883.777Pelodiscus_sinensis
ENSPKIG00000007322pabpc1l7076.020ENSPMGG00000023121-9176.020Periophthalmus_magnuspinnatus
ENSPKIG00000007322pabpc1l6291.667ENSPMGG00000023117pabpc1l9788.837Periophthalmus_magnuspinnatus
ENSPKIG00000007322pabpc1l9961.465ENSPEMG00000020671Pabpc1l9962.179Peromyscus_maniculatus_bairdii
ENSPKIG00000007322pabpc1l10078.526ENSPFOG00000013241pabpc1l10078.219Poecilia_formosa
ENSPKIG00000007322pabpc1l5293.846ENSPLAG00000023686-9293.846Poecilia_latipinna
ENSPKIG00000007322pabpc1l10078.219ENSPLAG00000017490-10078.219Poecilia_latipinna
ENSPKIG00000007322pabpc1l10078.309ENSPMEG00000007677pabpc1l10078.309Poecilia_mexicana
ENSPKIG00000007322pabpc1l5293.846ENSPMEG00000009185-8893.846Poecilia_mexicana
ENSPKIG00000007322pabpc1l7280.045ENSPREG00000015886pabpc1l9985.680Poecilia_reticulata
ENSPKIG00000007322pabpc1l9970.692ENSPPYG00000011042PABPC1L9971.222Pongo_abelii
ENSPKIG00000007322pabpc1l6281.250ENSPCAG00000011787-7581.250Procavia_capensis
ENSPKIG00000007322pabpc1l9970.853ENSPCOG00000020630PABPC1L9971.337Propithecus_coquereli
ENSPKIG00000007322pabpc1l9969.132ENSPVAG00000012663PABPC1L9969.132Pteropus_vampyrus
ENSPKIG00000007322pabpc1l9983.693ENSPNYG00000004101pabpc1l10083.693Pundamilia_nyererei
ENSPKIG00000007322pabpc1l10076.349ENSPNAG00000021248pabpc1l10076.349Pygocentrus_nattereri
ENSPKIG00000007322pabpc1l9961.882ENSRNOG00000012750Pabpc1l9963.082Rattus_norvegicus
ENSPKIG00000007322pabpc1l9971.176ENSRBIG00000035381PABPC1L9971.589Rhinopithecus_bieti
ENSPKIG00000007322pabpc1l9970.853ENSRROG00000044498PABPC1L9971.268Rhinopithecus_roxellana
ENSPKIG00000007322pabpc1l9970.144ENSSBOG00000009532-9970.144Saimiri_boliviensis_boliviensis
ENSPKIG00000007322pabpc1l9870.648ENSSHAG00000011446PABPC1L10070.648Sarcophilus_harrisii
ENSPKIG00000007322pabpc1l10088.160ENSSFOG00015017304pabpc1l10088.160Scleropages_formosus
ENSPKIG00000007322pabpc1l10078.720ENSSMAG00000010516pabpc1l9991.045Scophthalmus_maximus
ENSPKIG00000007322pabpc1l10078.855ENSSDUG00000014743pabpc1l10078.855Seriola_dumerili
ENSPKIG00000007322pabpc1l9883.693ENSSLDG00000006981pabpc1l9991.388Seriola_lalandi_dorsalis
ENSPKIG00000007322pabpc1l9976.837ENSSPUG00000004233PABPC1L9876.837Sphenodon_punctatus
ENSPKIG00000007322pabpc1l8783.158ENSSPAG00000017137pabpc1l9783.158Stegastes_partitus
ENSPKIG00000007322pabpc1l9970.900ENSSSCG00000007382PABPC1L9970.900Sus_scrofa
ENSPKIG00000007322pabpc1l10075.392ENSTGUG00000005114PABPC1L10075.392Taeniopygia_guttata
ENSPKIG00000007322pabpc1l9779.310ENSTRUG00000011085pabpc1l9779.310Takifugu_rubripes
ENSPKIG00000007322pabpc1l9977.083ENSTNIG00000017903pabpc1l9877.083Tetraodon_nigroviridis
ENSPKIG00000007322pabpc1l9479.110ENSTBEG00000002851PABPC1L7979.110Tupaia_belangeri
ENSPKIG00000007322pabpc1l9468.761ENSTTRG00000007618PABPC1L10068.926Tursiops_truncatus
ENSPKIG00000007322pabpc1l9968.960ENSUAMG00000017682PABPC1L9968.960Ursus_americanus
ENSPKIG00000007322pabpc1l7468.966ENSUMAG00000025436PABPC1L9474.271Ursus_maritimus
ENSPKIG00000007322pabpc1l9877.866ENSVVUG00000018939PABPC1L9977.866Vulpes_vulpes
ENSPKIG00000007322pabpc1l9973.046ENSXETG00000022831pabpc1l9973.046Xenopus_tropicalis
ENSPKIG00000007322pabpc1l10077.564ENSXCOG00000005459pabpc1l9989.362Xiphophorus_couchianus
ENSPKIG00000007322pabpc1l10077.424ENSXMAG00000017135pabpc1l10077.424Xiphophorus_maculatus

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