EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000007421 (Gene tree)
Gene ID: 111860364
Gene Symbol: r3hdm4
Alias: -
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7709 bases
Position: chrPGUA01000005.1:853015-860723
Accession: 111860364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000023996	R3H	PF01424.22	1.6e-06	1	1
ENSPKIP00000024012	R3H	PF01424.22	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000004695	-	4305	-	ENSPKIP00000023996	260 (aa)	XP_023699762	UPI000CD5F645
ENSPKIT00000004711	-	4228	-	ENSPKIP00000024012	260 (aa)	XP_023699762	UPI000CD5F645

Gene Model

Click here to download ENSPKIG00000007421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007421's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007421	r3hdm4	88	55.745	ENSG00000198858	R3HDM4	90	56.250	Homo_sapiens
ENSPKIG00000007421	r3hdm4	88	55.745	ENSAMEG00000003001	R3HDM4	94	56.277	Ailuropoda_melanoleuca
ENSPKIG00000007421	r3hdm4	100	67.176	ENSACIG00000004672	r3hdm4	100	65.649	Amphilophus_citrinellus
ENSPKIG00000007421	r3hdm4	98	71.705	ENSATEG00000015913	r3hdm4	99	70.155	Anabas_testudineus
ENSPKIG00000007421	r3hdm4	88	55.319	ENSANAG00000029748	R3HDM4	95	55.411	Aotus_nancymaae
ENSPKIG00000007421	r3hdm4	88	55.983	ENSBTAG00000046406	R3HDM4	86	56.087	Bos_taurus
ENSPKIG00000007421	r3hdm4	88	55.556	ENSCJAG00000020114	R3HDM4	86	55.652	Callithrix_jacchus
ENSPKIG00000007421	r3hdm4	88	56.596	ENSCAFG00000019665	R3HDM4	85	57.143	Canis_familiaris
ENSPKIG00000007421	r3hdm4	88	56.170	ENSCAFG00020016880	R3HDM4	85	56.710	Canis_lupus_dingo
ENSPKIG00000007421	r3hdm4	100	50.368	ENSCHIG00000020110	R3HDM4	88	55.652	Capra_hircus
ENSPKIG00000007421	r3hdm4	99	52.091	ENSCCAG00000019955	R3HDM4	93	52.091	Cebus_capucinus
ENSPKIG00000007421	r3hdm4	88	55.882	ENSCATG00000037269	R3HDM4	86	55.794	Cercocebus_atys
ENSPKIG00000007421	r3hdm4	88	55.983	ENSCLAG00000007094	R3HDM4	94	56.522	Chinchilla_lanigera
ENSPKIG00000007421	r3hdm4	88	56.596	ENSCSAG00000012574	R3HDM4	86	56.710	Chlorocebus_sabaeus
ENSPKIG00000007421	r3hdm4	100	57.795	ENSCPBG00000009805	R3HDM4	100	57.795	Chrysemys_picta_bellii
ENSPKIG00000007421	r3hdm4	88	56.170	ENSCANG00000040439	R3HDM4	81	56.277	Colobus_angolensis_palliatus
ENSPKIG00000007421	r3hdm4	88	56.223	ENSCGRG00001021650	R3hdm4	86	56.769	Cricetulus_griseus_chok1gshd
ENSPKIG00000007421	r3hdm4	88	56.223	ENSCGRG00000013169	R3hdm4	86	56.769	Cricetulus_griseus_crigri
ENSPKIG00000007421	r3hdm4	100	64.751	ENSCSEG00000018211	r3hdm4	100	63.218	Cynoglossus_semilaevis
ENSPKIG00000007421	r3hdm4	100	67.557	ENSCVAG00000017127	r3hdm4	100	66.031	Cyprinodon_variegatus
ENSPKIG00000007421	r3hdm4	88	55.556	ENSDORG00000006605	R3hdm4	94	55.652	Dipodomys_ordii
ENSPKIG00000007421	r3hdm4	88	55.983	ENSEASG00005021556	R3HDM4	84	56.522	Equus_asinus_asinus
ENSPKIG00000007421	r3hdm4	88	55.983	ENSECAG00000000003	R3HDM4	85	56.522	Equus_caballus
ENSPKIG00000007421	r3hdm4	88	56.596	ENSFCAG00000042437	R3HDM4	85	57.143	Felis_catus
ENSPKIG00000007421	r3hdm4	88	61.638	ENSFALG00000013938	R3HDM4	95	61.135	Ficedula_albicollis
ENSPKIG00000007421	r3hdm4	88	55.085	ENSFDAG00000017040	R3HDM4	94	55.172	Fukomys_damarensis
ENSPKIG00000007421	r3hdm4	100	65.649	ENSFHEG00000017636	r3hdm4	100	64.122	Fundulus_heteroclitus
ENSPKIG00000007421	r3hdm4	91	63.983	ENSGMOG00000001231	r3hdm4	94	64.602	Gadus_morhua
ENSPKIG00000007421	r3hdm4	88	61.277	ENSGALG00000001998	R3HDM4	87	60.606	Gallus_gallus
ENSPKIG00000007421	r3hdm4	100	65.649	ENSGAFG00000004173	r3hdm4	100	64.122	Gambusia_affinis
ENSPKIG00000007421	r3hdm4	100	58.175	ENSGAGG00000019698	R3HDM4	100	58.175	Gopherus_agassizii
ENSPKIG00000007421	r3hdm4	88	55.556	ENSGGOG00000008040	R3HDM4	94	55.652	Gorilla_gorilla
ENSPKIG00000007421	r3hdm4	100	69.084	ENSHBUG00000014810	r3hdm4	100	67.939	Haplochromis_burtoni
ENSPKIG00000007421	r3hdm4	88	55.983	ENSHGLG00000016194	R3HDM4	86	56.522	Heterocephalus_glaber_female
ENSPKIG00000007421	r3hdm4	99	64.368	ENSHCOG00000008422	r3hdm4	99	62.835	Hippocampus_comes
ENSPKIG00000007421	r3hdm4	100	67.050	ENSIPUG00000006716	r3hdm4	100	67.050	Ictalurus_punctatus
ENSPKIG00000007421	r3hdm4	88	53.419	ENSSTOG00000023015	R3HDM4	94	54.783	Ictidomys_tridecemlineatus
ENSPKIG00000007421	r3hdm4	88	56.223	ENSJJAG00000012475	R3hdm4	87	56.769	Jaculus_jaculus
ENSPKIG00000007421	r3hdm4	100	66.794	ENSKMAG00000005853	r3hdm4	100	64.885	Kryptolebias_marmoratus
ENSPKIG00000007421	r3hdm4	100	68.321	ENSLBEG00000000730	r3hdm4	100	66.794	Labrus_bergylta
ENSPKIG00000007421	r3hdm4	100	58.801	ENSLACG00000016445	R3HDM4	100	58.801	Latimeria_chalumnae
ENSPKIG00000007421	r3hdm4	100	68.061	ENSLOCG00000002423	r3hdm4	100	68.821	Lepisosteus_oculatus
ENSPKIG00000007421	r3hdm4	89	55.745	ENSLAFG00000017796	R3HDM4	88	56.579	Loxodonta_africana
ENSPKIG00000007421	r3hdm4	88	56.170	ENSMFAG00000044131	R3HDM4	86	56.277	Macaca_fascicularis
ENSPKIG00000007421	r3hdm4	84	56.696	ENSMMUG00000009682	R3HDM4	90	56.696	Macaca_mulatta
ENSPKIG00000007421	r3hdm4	88	56.170	ENSMNEG00000044115	R3HDM4	93	56.277	Macaca_nemestrina
ENSPKIG00000007421	r3hdm4	88	55.882	ENSMLEG00000035693	R3HDM4	86	55.794	Mandrillus_leucophaeus
ENSPKIG00000007421	r3hdm4	87	71.616	ENSMAMG00000005652	r3hdm4	91	70.306	Mastacembelus_armatus
ENSPKIG00000007421	r3hdm4	88	55.983	ENSMAUG00000010611	R3hdm4	89	56.522	Mesocricetus_auratus
ENSPKIG00000007421	r3hdm4	88	56.838	ENSMICG00000010124	R3HDM4	85	57.391	Microcebus_murinus
ENSPKIG00000007421	r3hdm4	88	54.113	ENSMOCG00000002646	R3hdm4	86	56.332	Microtus_ochrogaster
ENSPKIG00000007421	r3hdm4	100	70.229	ENSMMOG00000008253	r3hdm4	100	68.702	Mola_mola
ENSPKIG00000007421	r3hdm4	87	60.435	ENSMODG00000005698	R3HDM4	99	60.699	Monodelphis_domestica
ENSPKIG00000007421	r3hdm4	100	67.557	ENSMALG00000018856	r3hdm4	100	66.031	Monopterus_albus
ENSPKIG00000007421	r3hdm4	89	53.419	MGP_CAROLIEiJ_G0015551	R3hdm4	86	56.140	Mus_caroli
ENSPKIG00000007421	r3hdm4	88	53.913	ENSMUSG00000035781	R3hdm4	86	57.018	Mus_musculus
ENSPKIG00000007421	r3hdm4	88	53.680	MGP_PahariEiJ_G0030964	R3hdm4	86	56.140	Mus_pahari
ENSPKIG00000007421	r3hdm4	86	54.425	MGP_SPRETEiJ_G0016369	-	72	57.018	Mus_spretus
ENSPKIG00000007421	r3hdm4	87	57.759	ENSMPUG00000009394	R3HDM4	86	58.009	Mustela_putorius_furo
ENSPKIG00000007421	r3hdm4	100	69.466	ENSNBRG00000004438	r3hdm4	100	68.321	Neolamprologus_brichardi
ENSPKIG00000007421	r3hdm4	83	53.982	ENSNLEG00000001022	R3HDM4	96	54.054	Nomascus_leucogenys
ENSPKIG00000007421	r3hdm4	89	59.574	ENSMEUG00000011020	R3HDM4	96	59.565	Notamacropus_eugenii
ENSPKIG00000007421	r3hdm4	88	56.410	ENSODEG00000011745	R3HDM4	86	56.957	Octodon_degus
ENSPKIG00000007421	r3hdm4	100	68.702	ENSONIG00000012675	r3hdm4	92	67.557	Oreochromis_niloticus
ENSPKIG00000007421	r3hdm4	100	67.557	ENSOMEG00000003005	r3hdm4	100	66.412	Oryzias_melastigma
ENSPKIG00000007421	r3hdm4	88	56.652	ENSOGAG00000025656	R3HDM4	86	57.205	Otolemur_garnettii
ENSPKIG00000007421	r3hdm4	88	55.556	ENSOARG00000009945	R3HDM4	94	55.652	Ovis_aries
ENSPKIG00000007421	r3hdm4	88	55.983	ENSPPAG00000042371	R3HDM4	94	56.087	Pan_paniscus
ENSPKIG00000007421	r3hdm4	51	54.887	ENSPTRG00000049897	-	100	54.887	Pan_troglodytes
ENSPKIG00000007421	r3hdm4	88	56.170	ENSPANG00000015203	R3HDM4	86	56.277	Papio_anubis
ENSPKIG00000007421	r3hdm4	100	61.217	ENSPMGG00000020467	r3hdm4	100	61.217	Periophthalmus_magnuspinnatus
ENSPKIG00000007421	r3hdm4	88	56.034	ENSPEMG00000008365	Tmem259	94	56.579	Peromyscus_maniculatus_bairdii
ENSPKIG00000007421	r3hdm4	100	65.267	ENSPFOG00000003199	r3hdm4	100	63.740	Poecilia_formosa
ENSPKIG00000007421	r3hdm4	100	65.267	ENSPMEG00000014183	r3hdm4	100	63.740	Poecilia_mexicana
ENSPKIG00000007421	r3hdm4	100	64.504	ENSPREG00000010709	r3hdm4	100	62.977	Poecilia_reticulata
ENSPKIG00000007421	r3hdm4	88	56.223	ENSPPYG00000009297	R3HDM4	86	56.332	Pongo_abelii
ENSPKIG00000007421	r3hdm4	57	53.642	ENSPCAG00000010997	R3HDM4	55	53.642	Procavia_capensis
ENSPKIG00000007421	r3hdm4	88	57.447	ENSPCOG00000016785	R3HDM4	85	57.576	Propithecus_coquereli
ENSPKIG00000007421	r3hdm4	100	69.084	ENSPNYG00000017489	r3hdm4	100	67.939	Pundamilia_nyererei
ENSPKIG00000007421	r3hdm4	88	53.680	ENSRNOG00000011489	R3hdm4	86	55.895	Rattus_norvegicus
ENSPKIG00000007421	r3hdm4	88	56.170	ENSRROG00000028842	R3HDM4	86	56.277	Rhinopithecus_roxellana
ENSPKIG00000007421	r3hdm4	88	52.301	ENSSBOG00000019298	R3HDM4	68	53.617	Saimiri_boliviensis_boliviensis
ENSPKIG00000007421	r3hdm4	55	59.589	ENSSHAG00000003036	-	100	59.589	Sarcophilus_harrisii
ENSPKIG00000007421	r3hdm4	100	70.741	ENSSFOG00015020574	r3hdm4	100	70.741	Scleropages_formosus
ENSPKIG00000007421	r3hdm4	100	67.939	ENSSMAG00000021090	r3hdm4	74	66.794	Scophthalmus_maximus
ENSPKIG00000007421	r3hdm4	100	70.611	ENSSDUG00000008488	r3hdm4	100	69.084	Seriola_dumerili
ENSPKIG00000007421	r3hdm4	100	70.611	ENSSLDG00000025328	r3hdm4	100	69.084	Seriola_lalandi_dorsalis
ENSPKIG00000007421	r3hdm4	89	61.017	ENSSPUG00000005434	R3HDM4	89	61.135	Sphenodon_punctatus
ENSPKIG00000007421	r3hdm4	99	65.900	ENSSPAG00000002562	r3hdm4	99	65.900	Stegastes_partitus
ENSPKIG00000007421	r3hdm4	88	56.838	ENSSSCG00000013419	R3HDM4	85	56.957	Sus_scrofa
ENSPKIG00000007421	r3hdm4	75	55.172	ENSTGUG00000000663	R3HDM4	95	56.000	Taeniopygia_guttata
ENSPKIG00000007421	r3hdm4	88	57.576	ENSTTRG00000001470	R3HDM4	94	58.590	Tursiops_truncatus
ENSPKIG00000007421	r3hdm4	84	56.250	ENSUAMG00000005751	R3HDM4	100	56.250	Ursus_americanus
ENSPKIG00000007421	r3hdm4	88	56.596	ENSVVUG00000022685	R3HDM4	85	57.143	Vulpes_vulpes
ENSPKIG00000007421	r3hdm4	95	45.565	ENSXETG00000033624	R3HDM4	87	47.321	Xenopus_tropicalis
ENSPKIG00000007421	r3hdm4	100	65.779	ENSXCOG00000005127	r3hdm4	100	64.259	Xiphophorus_couchianus
ENSPKIG00000007421	r3hdm4	100	66.031	ENSXMAG00000022875	r3hdm4	100	64.504	Xiphophorus_maculatus