EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007643 (Gene tree)
Gene ID: 111835355
Gene Symbol: gfi1b
Alias: -
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 5743 bases
Position: chrPGUA01000512.1:255014-260756
Accession: 111835355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000024359	zf-C2H2	PF00096.26	1.5e-22	1	5
ENSPKIP00000024359	zf-C2H2	PF00096.26	1.5e-22	2	5
ENSPKIP00000024359	zf-C2H2	PF00096.26	1.5e-22	3	5
ENSPKIP00000024359	zf-C2H2	PF00096.26	1.5e-22	4	5
ENSPKIP00000024359	zf-C2H2	PF00096.26	1.5e-22	5	5
ENSPKIP00000024359	zf-met	PF12874.7	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000005065	-	1853	-	ENSPKIP00000024359	336 (aa)	XP_023651330	UPI000CD64E79

Gene Model

Click here to download ENSPKIG00000007643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007643	gfi1b	57	43.662	ENSPKIG00000006563	-	98	41.718
ENSPKIG00000007643	gfi1b	89	37.647	ENSPKIG00000018633	-	82	37.647
ENSPKIG00000007643	gfi1b	100	49.010	ENSPKIG00000004263	GFI1	100	49.010
ENSPKIG00000007643	gfi1b	80	40.964	ENSPKIG00000009111	-	97	41.667
ENSPKIG00000007643	gfi1b	63	41.964	ENSPKIG00000012069	-	97	43.125
ENSPKIG00000007643	gfi1b	50	34.906	ENSPKIG00000006393	snai1a	67	34.906
ENSPKIG00000007643	gfi1b	51	32.237	ENSPKIG00000018202	-	74	39.450
ENSPKIG00000007643	gfi1b	93	35.252	ENSPKIG00000017781	-	93	35.252
ENSPKIG00000007643	gfi1b	53	45.833	ENSPKIG00000015951	-	67	45.833
ENSPKIG00000007643	gfi1b	57	42.105	ENSPKIG00000020324	-	50	37.791
ENSPKIG00000007643	gfi1b	58	41.071	ENSPKIG00000020085	scrt1a	68	41.071
ENSPKIG00000007643	gfi1b	53	32.593	ENSPKIG00000001492	-	84	32.593
ENSPKIG00000007643	gfi1b	57	45.614	ENSPKIG00000002670	-	62	45.614
ENSPKIG00000007643	gfi1b	54	38.562	ENSPKIG00000005164	-	52	38.562
ENSPKIG00000007643	gfi1b	54	38.393	ENSPKIG00000015492	prdm5	67	38.053
ENSPKIG00000007643	gfi1b	79	41.844	ENSPKIG00000012290	-	99	42.708
ENSPKIG00000007643	gfi1b	58	41.071	ENSPKIG00000022303	SCRT1	68	41.071
ENSPKIG00000007643	gfi1b	100	34.711	ENSPKIG00000007872	SNAI3	98	34.711
ENSPKIG00000007643	gfi1b	67	43.011	ENSPKIG00000018168	znf236	64	43.011
ENSPKIG00000007643	gfi1b	63	42.857	ENSPKIG00000015139	znf319b	88	42.857
ENSPKIG00000007643	gfi1b	57	40.000	ENSPKIG00000006616	-	60	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007643	gfi1b	100	70.536	ENSAPOG00000001296	gfi1b	100	70.536	Acanthochromis_polyacanthus
ENSPKIG00000007643	gfi1b	71	82.353	ENSACIG00000002190	gfi1b	79	82.353	Amphilophus_citrinellus
ENSPKIG00000007643	gfi1b	100	71.429	ENSAOCG00000021187	gfi1b	100	71.429	Amphiprion_ocellaris
ENSPKIG00000007643	gfi1b	100	71.429	ENSAPEG00000016196	gfi1b	100	71.429	Amphiprion_percula
ENSPKIG00000007643	gfi1b	100	73.156	ENSATEG00000002534	gfi1b	100	73.156	Anabas_testudineus
ENSPKIG00000007643	gfi1b	100	61.318	ENSAPLG00000003373	GFI1B	100	61.318	Anas_platyrhynchos
ENSPKIG00000007643	gfi1b	100	66.964	ENSACLG00000027053	gfi1b	100	66.964	Astatotilapia_calliptera
ENSPKIG00000007643	gfi1b	100	74.487	ENSAMXG00000037544	GFI1B	100	74.487	Astyanax_mexicanus
ENSPKIG00000007643	gfi1b	100	59.420	ENSCAPG00000010404	GFI1B	100	59.420	Cavia_aperea
ENSPKIG00000007643	gfi1b	100	61.281	ENSCPBG00000021186	GFI1B	100	61.281	Chrysemys_picta_bellii
ENSPKIG00000007643	gfi1b	100	67.456	ENSCSEG00000001315	gfi1b	100	67.456	Cynoglossus_semilaevis
ENSPKIG00000007643	gfi1b	100	68.546	ENSCVAG00000017168	gfi1b	100	68.546	Cyprinodon_variegatus
ENSPKIG00000007643	gfi1b	100	72.647	ENSDARG00000079947	gfi1b	99	86.076	Danio_rerio
ENSPKIG00000007643	gfi1b	61	54.146	ENSEEUG00000012609	-	90	54.146	Erinaceus_europaeus
ENSPKIG00000007643	gfi1b	100	74.636	ENSELUG00000016933	gfi1b	100	74.636	Esox_lucius
ENSPKIG00000007643	gfi1b	100	57.104	ENSFALG00000001479	GFI1B	100	57.104	Ficedula_albicollis
ENSPKIG00000007643	gfi1b	100	70.882	ENSFHEG00000015138	gfi1b	100	70.882	Fundulus_heteroclitus
ENSPKIG00000007643	gfi1b	71	81.667	ENSGMOG00000019123	gfi1b	90	81.667	Gadus_morhua
ENSPKIG00000007643	gfi1b	100	60.969	ENSGALG00000003478	GFI1B	100	60.969	Gallus_gallus
ENSPKIG00000007643	gfi1b	70	84.188	ENSGAFG00000003059	gfi1b	100	84.188	Gambusia_affinis
ENSPKIG00000007643	gfi1b	100	64.820	ENSGACG00000018134	gfi1b	100	64.820	Gasterosteus_aculeatus
ENSPKIG00000007643	gfi1b	100	62.130	ENSGAGG00000021327	GFI1B	100	62.130	Gopherus_agassizii
ENSPKIG00000007643	gfi1b	100	66.964	ENSHBUG00000005451	gfi1b	100	66.964	Haplochromis_burtoni
ENSPKIG00000007643	gfi1b	100	66.369	ENSHCOG00000013713	gfi1b	100	67.062	Hippocampus_comes
ENSPKIG00000007643	gfi1b	100	74.107	ENSIPUG00000012769	gfi1b	100	74.107	Ictalurus_punctatus
ENSPKIG00000007643	gfi1b	99	55.438	ENSJJAG00000016355	Gfi1b	100	55.438	Jaculus_jaculus
ENSPKIG00000007643	gfi1b	100	70.920	ENSKMAG00000016047	gfi1b	100	70.920	Kryptolebias_marmoratus
ENSPKIG00000007643	gfi1b	100	70.326	ENSLBEG00000020297	gfi1b	99	69.617	Labrus_bergylta
ENSPKIG00000007643	gfi1b	100	59.195	ENSLACG00000012207	GFI1B	100	59.195	Latimeria_chalumnae
ENSPKIG00000007643	gfi1b	100	72.141	ENSLOCG00000005750	gfi1b	100	72.141	Lepisosteus_oculatus
ENSPKIG00000007643	gfi1b	100	60.641	ENSLAFG00000022367	GFI1B	100	60.933	Loxodonta_africana
ENSPKIG00000007643	gfi1b	100	72.024	ENSMAMG00000003040	gfi1b	100	72.024	Mastacembelus_armatus
ENSPKIG00000007643	gfi1b	99	66.866	ENSMZEG00005015594	gfi1b	99	66.866	Maylandia_zebra
ENSPKIG00000007643	gfi1b	100	60.969	ENSMGAG00000006129	GFI1B	100	60.969	Meleagris_gallopavo
ENSPKIG00000007643	gfi1b	100	70.294	ENSMMOG00000011764	gfi1b	100	70.294	Mola_mola
ENSPKIG00000007643	gfi1b	100	55.496	ENSMODG00000012600	GFI1B	100	55.496	Monodelphis_domestica
ENSPKIG00000007643	gfi1b	100	69.643	ENSMALG00000004034	gfi1b	100	69.643	Monopterus_albus
ENSPKIG00000007643	gfi1b	99	60.882	ENSNGAG00000003333	Gfi1b	100	60.882	Nannospalax_galili
ENSPKIG00000007643	gfi1b	100	67.062	ENSNBRG00000012391	gfi1b	100	67.062	Neolamprologus_brichardi
ENSPKIG00000007643	gfi1b	100	67.359	ENSONIG00000013011	gfi1b	94	88.268	Oreochromis_niloticus
ENSPKIG00000007643	gfi1b	100	60.882	ENSOANG00000014723	GFI1B	100	60.882	Ornithorhynchus_anatinus
ENSPKIG00000007643	gfi1b	100	54.167	ENSORLG00000014390	GFI1B	96	61.189	Oryzias_latipes
ENSPKIG00000007643	gfi1b	100	67.656	ENSORLG00020003719	GFI1B	100	67.656	Oryzias_latipes_hni
ENSPKIG00000007643	gfi1b	100	67.456	ENSORLG00015017142	gfi1b	100	67.456	Oryzias_latipes_hsok
ENSPKIG00000007643	gfi1b	100	67.262	ENSOMEG00000015149	GFI1B	100	68.155	Oryzias_melastigma
ENSPKIG00000007643	gfi1b	100	59.710	ENSOGAG00000008879	GFI1B	100	59.884	Otolemur_garnettii
ENSPKIG00000007643	gfi1b	100	62.396	ENSPSIG00000012112	GFI1B	100	62.396	Pelodiscus_sinensis
ENSPKIG00000007643	gfi1b	99	63.557	ENSPMGG00000006021	gfi1b	99	63.557	Periophthalmus_magnuspinnatus
ENSPKIG00000007643	gfi1b	100	54.155	ENSPCIG00000019724	GFI1B	100	54.155	Phascolarctos_cinereus
ENSPKIG00000007643	gfi1b	100	71.217	ENSPFOG00000003460	gfi1b	100	71.217	Poecilia_formosa
ENSPKIG00000007643	gfi1b	100	71.513	ENSPLAG00000021960	GFI1B	100	71.513	Poecilia_latipinna
ENSPKIG00000007643	gfi1b	100	70.294	ENSPLAG00000017181	GFI1B	100	70.294	Poecilia_latipinna
ENSPKIG00000007643	gfi1b	100	71.217	ENSPMEG00000001556	GFI1B	100	71.217	Poecilia_mexicana
ENSPKIG00000007643	gfi1b	100	71.217	ENSPMEG00000019220	gfi1b	100	71.217	Poecilia_mexicana
ENSPKIG00000007643	gfi1b	100	71.217	ENSPREG00000021718	gfi1b	100	71.217	Poecilia_reticulata
ENSPKIG00000007643	gfi1b	100	66.964	ENSPNYG00000018422	gfi1b	100	66.964	Pundamilia_nyererei
ENSPKIG00000007643	gfi1b	100	73.256	ENSPNAG00000021118	gfi1b	100	73.256	Pygocentrus_nattereri
ENSPKIG00000007643	gfi1b	100	49.333	ENSSHAG00000006462	GFI1B	100	49.333	Sarcophilus_harrisii
ENSPKIG00000007643	gfi1b	83	70.567	ENSSFOG00015011566	gfi1b	90	70.567	Scleropages_formosus
ENSPKIG00000007643	gfi1b	99	71.045	ENSSMAG00000015181	gfi1b	99	71.045	Scophthalmus_maximus
ENSPKIG00000007643	gfi1b	100	71.429	ENSSDUG00000011604	gfi1b	100	71.429	Seriola_dumerili
ENSPKIG00000007643	gfi1b	100	71.429	ENSSLDG00000013823	gfi1b	100	71.429	Seriola_lalandi_dorsalis
ENSPKIG00000007643	gfi1b	100	52.174	ENSSPUG00000016039	GFI1B	100	52.174	Sphenodon_punctatus
ENSPKIG00000007643	gfi1b	100	72.024	ENSSPAG00000022914	gfi1b	100	72.024	Stegastes_partitus
ENSPKIG00000007643	gfi1b	51	61.864	ENSTGUG00000015953	-	61	61.864	Taeniopygia_guttata
ENSPKIG00000007643	gfi1b	100	67.262	ENSTRUG00000004525	gfi1b	100	67.262	Takifugu_rubripes
ENSPKIG00000007643	gfi1b	100	66.172	ENSTNIG00000003834	gfi1b	100	66.172	Tetraodon_nigroviridis
ENSPKIG00000007643	gfi1b	100	44.898	ENSTBEG00000014459	GFI1B	100	44.898	Tupaia_belangeri
ENSPKIG00000007643	gfi1b	100	57.434	ENSXETG00000006263	gfi1b	100	55.866	Xenopus_tropicalis
ENSPKIG00000007643	gfi1b	100	69.477	ENSXMAG00000027589	gfi1b	100	69.477	Xiphophorus_maculatus