EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000007697 (Gene tree)
Gene ID: 111834195
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 2674 bases
Position: chrPGUA01000472.1:119097-121770
Accession: 111834195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000024445	Clp1	PF06807.14	6.7e-29	1	1
ENSPKIP00000024463	Clp1	PF06807.14	6.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000005152	-	1358	-	ENSPKIP00000024445	449 (aa)	XP_023648998	UPI000CD62CC8
ENSPKIT00000005170	-	1308	-	ENSPKIP00000024463	435 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000007697's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007697	clp1	99	77.829	ENSG00000172409	CLP1	97	80.630	Homo_sapiens
ENSPKIG00000007697	clp1	100	86.067	ENSAPOG00000008242	clp1	100	86.067	Acanthochromis_polyacanthus
ENSPKIG00000007697	clp1	99	77.829	ENSAMEG00000014551	CLP1	99	77.829	Ailuropoda_melanoleuca
ENSPKIG00000007697	clp1	100	85.393	ENSACIG00000006310	clp1	99	85.393	Amphilophus_citrinellus
ENSPKIG00000007697	clp1	100	86.067	ENSAOCG00000010681	clp1	98	89.524	Amphiprion_ocellaris
ENSPKIG00000007697	clp1	100	86.067	ENSAPEG00000012165	clp1	98	89.524	Amphiprion_percula
ENSPKIG00000007697	clp1	100	85.843	ENSATEG00000012374	clp1	100	85.618	Anabas_testudineus
ENSPKIG00000007697	clp1	94	80.872	ENSACAG00000007139	CLP1	97	80.872	Anolis_carolinensis
ENSPKIG00000007697	clp1	99	77.829	ENSANAG00000034935	CLP1	97	80.630	Aotus_nancymaae
ENSPKIG00000007697	clp1	100	84.944	ENSACLG00000013573	clp1	100	84.944	Astatotilapia_calliptera
ENSPKIG00000007697	clp1	100	89.755	ENSAMXG00000014194	clp1	100	89.755	Astyanax_mexicanus
ENSPKIG00000007697	clp1	94	80.387	ENSBTAG00000006493	CLP1	97	80.387	Bos_taurus
ENSPKIG00000007697	clp1	94	48.798	WBGene00010304	clpf-1	97	48.798	Caenorhabditis_elegans
ENSPKIG00000007697	clp1	99	77.829	ENSCJAG00000008748	CLP1	97	80.630	Callithrix_jacchus
ENSPKIG00000007697	clp1	94	80.387	ENSCAFG00000007815	CLP1	97	80.387	Canis_familiaris
ENSPKIG00000007697	clp1	94	80.387	ENSCAFG00020000903	CLP1	97	80.387	Canis_lupus_dingo
ENSPKIG00000007697	clp1	94	80.387	ENSCHIG00000023497	CLP1	97	80.387	Capra_hircus
ENSPKIG00000007697	clp1	99	78.060	ENSTSYG00000006824	CLP1	99	78.060	Carlito_syrichta
ENSPKIG00000007697	clp1	94	80.630	ENSCAPG00000009703	CLP1	97	80.630	Cavia_aperea
ENSPKIG00000007697	clp1	94	80.630	ENSCPOG00000012554	CLP1	99	80.630	Cavia_porcellus
ENSPKIG00000007697	clp1	94	80.387	ENSCCAG00000031957	CLP1	97	80.387	Cebus_capucinus
ENSPKIG00000007697	clp1	100	76.941	ENSCATG00000044628	CLP1	97	80.630	Cercocebus_atys
ENSPKIG00000007697	clp1	94	80.630	ENSCLAG00000004094	CLP1	97	80.630	Chinchilla_lanigera
ENSPKIG00000007697	clp1	94	80.630	ENSCSAG00000005994	CLP1	97	80.630	Chlorocebus_sabaeus
ENSPKIG00000007697	clp1	94	80.145	ENSCPBG00000016843	CLP1	97	80.145	Chrysemys_picta_bellii
ENSPKIG00000007697	clp1	94	63.592	ENSCING00000003779	-	96	63.592	Ciona_intestinalis
ENSPKIG00000007697	clp1	94	63.747	ENSCSAVG00000003437	-	96	63.747	Ciona_savignyi
ENSPKIG00000007697	clp1	99	77.829	ENSCANG00000034335	CLP1	97	80.630	Colobus_angolensis_palliatus
ENSPKIG00000007697	clp1	94	80.145	ENSCGRG00001002227	CLP1	97	80.145	Cricetulus_griseus_chok1gshd
ENSPKIG00000007697	clp1	94	80.145	ENSCGRG00000004328	CLP1	97	80.145	Cricetulus_griseus_crigri
ENSPKIG00000007697	clp1	100	83.146	ENSCSEG00000008614	clp1	100	82.921	Cynoglossus_semilaevis
ENSPKIG00000007697	clp1	100	85.169	ENSCVAG00000020101	clp1	100	84.719	Cyprinodon_variegatus
ENSPKIG00000007697	clp1	100	89.616	ENSDARG00000063663	clp1	100	89.616	Danio_rerio
ENSPKIG00000007697	clp1	94	80.097	ENSDNOG00000042415	CLP1	87	80.097	Dasypus_novemcinctus
ENSPKIG00000007697	clp1	94	80.387	ENSDORG00000014685	Clp1	97	80.387	Dipodomys_ordii
ENSPKIG00000007697	clp1	94	54.699	FBgn0033842	cbc	97	54.854	Drosophila_melanogaster
ENSPKIG00000007697	clp1	94	80.630	ENSETEG00000003009	CLP1	97	80.630	Echinops_telfairi
ENSPKIG00000007697	clp1	94	68.750	ENSEBUG00000011648	clp1	97	68.750	Eptatretus_burgeri
ENSPKIG00000007697	clp1	94	80.630	ENSEASG00005002093	CLP1	97	80.630	Equus_asinus_asinus
ENSPKIG00000007697	clp1	99	78.291	ENSECAG00000011597	CLP1	97	80.630	Equus_caballus
ENSPKIG00000007697	clp1	94	80.145	ENSEEUG00000012771	CLP1	97	80.145	Erinaceus_europaeus
ENSPKIG00000007697	clp1	94	93.160	ENSELUG00000024048	clp1	100	90.646	Esox_lucius
ENSPKIG00000007697	clp1	99	78.060	ENSFCAG00000006633	CLP1	97	80.387	Felis_catus
ENSPKIG00000007697	clp1	94	80.145	ENSFALG00000011145	CLP1	97	80.145	Ficedula_albicollis
ENSPKIG00000007697	clp1	94	80.630	ENSFDAG00000000234	CLP1	97	80.630	Fukomys_damarensis
ENSPKIG00000007697	clp1	100	85.393	ENSFHEG00000014760	CLP1	100	84.719	Fundulus_heteroclitus
ENSPKIG00000007697	clp1	100	90.950	ENSGMOG00000019340	clp1	100	90.498	Gadus_morhua
ENSPKIG00000007697	clp1	94	80.387	ENSGALG00000007370	CLP1	97	80.387	Gallus_gallus
ENSPKIG00000007697	clp1	100	85.169	ENSGAFG00000003020	clp1	97	88.095	Gambusia_affinis
ENSPKIG00000007697	clp1	100	85.843	ENSGACG00000017832	clp1	100	85.843	Gasterosteus_aculeatus
ENSPKIG00000007697	clp1	94	80.387	ENSGAGG00000013279	CLP1	97	80.387	Gopherus_agassizii
ENSPKIG00000007697	clp1	99	77.829	ENSGGOG00000023006	CLP1	97	80.630	Gorilla_gorilla
ENSPKIG00000007697	clp1	100	85.169	ENSHBUG00000010436	clp1	100	85.169	Haplochromis_burtoni
ENSPKIG00000007697	clp1	94	80.630	ENSHGLG00000009914	CLP1	97	80.630	Heterocephalus_glaber_female
ENSPKIG00000007697	clp1	94	80.630	ENSHGLG00100006105	CLP1	97	80.630	Heterocephalus_glaber_male
ENSPKIG00000007697	clp1	100	86.517	ENSHCOG00000010072	clp1	100	86.067	Hippocampus_comes
ENSPKIG00000007697	clp1	100	90.000	ENSIPUG00000016238	clp1	99	89.778	Ictalurus_punctatus
ENSPKIG00000007697	clp1	94	80.387	ENSSTOG00000029257	CLP1	97	80.387	Ictidomys_tridecemlineatus
ENSPKIG00000007697	clp1	94	80.387	ENSJJAG00000023691	Clp1	97	80.387	Jaculus_jaculus
ENSPKIG00000007697	clp1	100	85.843	ENSKMAG00000011990	clp1	100	85.393	Kryptolebias_marmoratus
ENSPKIG00000007697	clp1	100	86.517	ENSLBEG00000010201	clp1	100	86.517	Labrus_bergylta
ENSPKIG00000007697	clp1	94	80.387	ENSLACG00000003160	CLP1	97	80.387	Latimeria_chalumnae
ENSPKIG00000007697	clp1	72	90.683	ENSLOCG00000008074	clp1	100	90.683	Lepisosteus_oculatus
ENSPKIG00000007697	clp1	94	80.387	ENSLAFG00000014907	CLP1	97	80.387	Loxodonta_africana
ENSPKIG00000007697	clp1	99	77.829	ENSMFAG00000046074	CLP1	97	80.630	Macaca_fascicularis
ENSPKIG00000007697	clp1	99	77.829	ENSMMUG00000038007	CLP1	96	80.630	Macaca_mulatta
ENSPKIG00000007697	clp1	94	80.630	ENSMNEG00000000259	CLP1	97	80.630	Macaca_nemestrina
ENSPKIG00000007697	clp1	100	76.941	ENSMLEG00000043556	CLP1	97	80.630	Mandrillus_leucophaeus
ENSPKIG00000007697	clp1	100	86.517	ENSMAMG00000002149	clp1	100	86.517	Mastacembelus_armatus
ENSPKIG00000007697	clp1	100	84.944	ENSMZEG00005002850	clp1	100	84.944	Maylandia_zebra
ENSPKIG00000007697	clp1	94	80.387	ENSMGAG00000009643	CLP1	97	80.387	Meleagris_gallopavo
ENSPKIG00000007697	clp1	94	79.903	ENSMAUG00000016261	Clp1	97	79.903	Mesocricetus_auratus
ENSPKIG00000007697	clp1	99	77.523	ENSMICG00000004895	CLP1	97	80.387	Microcebus_murinus
ENSPKIG00000007697	clp1	94	80.387	ENSMOCG00000005498	Clp1	97	80.387	Microtus_ochrogaster
ENSPKIG00000007697	clp1	100	85.169	ENSMMOG00000003229	clp1	100	85.169	Mola_mola
ENSPKIG00000007697	clp1	94	80.387	ENSMODG00000020107	-	97	80.387	Monodelphis_domestica
ENSPKIG00000007697	clp1	94	80.387	ENSMODG00000024148	-	97	80.387	Monodelphis_domestica
ENSPKIG00000007697	clp1	100	85.843	ENSMALG00000014239	clp1	100	85.843	Monopterus_albus
ENSPKIG00000007697	clp1	94	80.145	MGP_CAROLIEiJ_G0023726	Clp1	97	80.145	Mus_caroli
ENSPKIG00000007697	clp1	94	80.145	ENSMUSG00000027079	Clp1	97	80.145	Mus_musculus
ENSPKIG00000007697	clp1	94	80.145	MGP_PahariEiJ_G0025177	Clp1	97	80.145	Mus_pahari
ENSPKIG00000007697	clp1	94	80.145	MGP_SPRETEiJ_G0024646	Clp1	97	80.145	Mus_spretus
ENSPKIG00000007697	clp1	94	80.387	ENSMPUG00000000268	CLP1	97	80.387	Mustela_putorius_furo
ENSPKIG00000007697	clp1	94	80.872	ENSMLUG00000007904	CLP1	97	80.872	Myotis_lucifugus
ENSPKIG00000007697	clp1	94	80.145	ENSNGAG00000006165	Clp1	97	80.145	Nannospalax_galili
ENSPKIG00000007697	clp1	100	85.169	ENSNBRG00000005225	clp1	100	85.169	Neolamprologus_brichardi
ENSPKIG00000007697	clp1	77	77.108	ENSNLEG00000012809	-	96	77.108	Nomascus_leucogenys
ENSPKIG00000007697	clp1	94	80.145	ENSMEUG00000010949	CLP1	97	80.145	Notamacropus_eugenii
ENSPKIG00000007697	clp1	68	81.271	ENSOPRG00000007329	CLP1	100	81.271	Ochotona_princeps
ENSPKIG00000007697	clp1	94	80.630	ENSODEG00000011410	CLP1	97	80.630	Octodon_degus
ENSPKIG00000007697	clp1	100	84.944	ENSONIG00000005089	clp1	100	84.944	Oreochromis_niloticus
ENSPKIG00000007697	clp1	94	80.387	ENSOCUG00000007045	CLP1	97	80.387	Oryctolagus_cuniculus
ENSPKIG00000007697	clp1	100	84.270	ENSORLG00000003647	clp1	100	84.045	Oryzias_latipes
ENSPKIG00000007697	clp1	100	84.045	ENSORLG00020016676	clp1	100	83.820	Oryzias_latipes_hni
ENSPKIG00000007697	clp1	100	84.270	ENSORLG00015019484	clp1	100	84.045	Oryzias_latipes_hsok
ENSPKIG00000007697	clp1	100	84.944	ENSOMEG00000021303	clp1	100	84.719	Oryzias_melastigma
ENSPKIG00000007697	clp1	94	80.387	ENSOGAG00000004508	CLP1	97	80.387	Otolemur_garnettii
ENSPKIG00000007697	clp1	94	79.419	ENSOARG00000010145	CLP1	95	79.419	Ovis_aries
ENSPKIG00000007697	clp1	99	77.829	ENSPPAG00000041519	CLP1	97	80.630	Pan_paniscus
ENSPKIG00000007697	clp1	94	80.387	ENSPPRG00000006135	CLP1	97	80.387	Panthera_pardus
ENSPKIG00000007697	clp1	94	80.387	ENSPTIG00000015866	CLP1	97	80.387	Panthera_tigris_altaica
ENSPKIG00000007697	clp1	94	80.630	ENSPTRG00000047318	CLP1	97	80.630	Pan_troglodytes
ENSPKIG00000007697	clp1	100	76.941	ENSPANG00000017078	CLP1	94	80.630	Papio_anubis
ENSPKIG00000007697	clp1	89	77.436	ENSPSIG00000005468	CLP1	97	77.436	Pelodiscus_sinensis
ENSPKIG00000007697	clp1	100	85.426	ENSPMGG00000012171	clp1	95	88.599	Periophthalmus_magnuspinnatus
ENSPKIG00000007697	clp1	94	80.387	ENSPEMG00000011213	-	97	80.387	Peromyscus_maniculatus_bairdii
ENSPKIG00000007697	clp1	94	71.256	ENSPMAG00000006707	clp1	97	71.256	Petromyzon_marinus
ENSPKIG00000007697	clp1	94	80.630	ENSPCIG00000011899	CLP1	97	80.630	Phascolarctos_cinereus
ENSPKIG00000007697	clp1	100	85.618	ENSPFOG00000008169	clp1	100	85.169	Poecilia_formosa
ENSPKIG00000007697	clp1	100	85.618	ENSPLAG00000022388	clp1	97	88.571	Poecilia_latipinna
ENSPKIG00000007697	clp1	100	85.618	ENSPMEG00000021088	clp1	97	88.571	Poecilia_mexicana
ENSPKIG00000007697	clp1	100	85.618	ENSPREG00000017802	clp1	100	84.944	Poecilia_reticulata
ENSPKIG00000007697	clp1	51	78.667	ENSPPYG00000003266	-	100	78.667	Pongo_abelii
ENSPKIG00000007697	clp1	99	77.829	ENSPCOG00000000360	CLP1	99	77.829	Propithecus_coquereli
ENSPKIG00000007697	clp1	94	80.387	ENSPVAG00000016270	CLP1	97	80.387	Pteropus_vampyrus
ENSPKIG00000007697	clp1	100	85.169	ENSPNYG00000017274	clp1	99	85.169	Pundamilia_nyererei
ENSPKIG00000007697	clp1	100	91.314	ENSPNAG00000026460	clp1	100	91.314	Pygocentrus_nattereri
ENSPKIG00000007697	clp1	94	80.145	ENSRNOG00000007416	Clp1	97	80.145	Rattus_norvegicus
ENSPKIG00000007697	clp1	94	80.630	ENSRBIG00000018191	CLP1	97	80.630	Rhinopithecus_bieti
ENSPKIG00000007697	clp1	99	77.829	ENSRROG00000039265	CLP1	97	80.630	Rhinopithecus_roxellana
ENSPKIG00000007697	clp1	94	80.630	ENSSBOG00000032517	-	97	80.630	Saimiri_boliviensis_boliviensis
ENSPKIG00000007697	clp1	93	65.926	ENSSBOG00000010558	-	93	65.926	Saimiri_boliviensis_boliviensis
ENSPKIG00000007697	clp1	94	80.387	ENSSHAG00000015695	CLP1	97	80.387	Sarcophilus_harrisii
ENSPKIG00000007697	clp1	100	93.111	ENSSFOG00015000628	clp1	100	93.111	Scleropages_formosus
ENSPKIG00000007697	clp1	100	85.843	ENSSMAG00000019423	clp1	99	85.393	Scophthalmus_maximus
ENSPKIG00000007697	clp1	100	86.517	ENSSDUG00000014495	clp1	100	86.517	Seriola_dumerili
ENSPKIG00000007697	clp1	100	86.292	ENSSLDG00000000937	clp1	100	86.292	Seriola_lalandi_dorsalis
ENSPKIG00000007697	clp1	51	78.571	ENSSARG00000002459	CLP1	100	78.571	Sorex_araneus
ENSPKIG00000007697	clp1	94	79.661	ENSSPUG00000016811	CLP1	97	79.661	Sphenodon_punctatus
ENSPKIG00000007697	clp1	100	85.843	ENSSPAG00000016052	clp1	100	85.843	Stegastes_partitus
ENSPKIG00000007697	clp1	94	80.387	ENSSSCG00000031442	CLP1	97	80.387	Sus_scrofa
ENSPKIG00000007697	clp1	94	80.145	ENSTGUG00000007002	CLP1	97	80.145	Taeniopygia_guttata
ENSPKIG00000007697	clp1	100	85.455	ENSTRUG00000012602	clp1	100	85.455	Takifugu_rubripes
ENSPKIG00000007697	clp1	100	84.545	ENSTNIG00000013125	clp1	100	84.545	Tetraodon_nigroviridis
ENSPKIG00000007697	clp1	94	80.145	ENSTBEG00000009975	CLP1	97	80.145	Tupaia_belangeri
ENSPKIG00000007697	clp1	94	80.145	ENSTTRG00000002096	CLP1	97	80.145	Tursiops_truncatus
ENSPKIG00000007697	clp1	94	80.387	ENSUAMG00000011388	CLP1	97	80.387	Ursus_americanus
ENSPKIG00000007697	clp1	94	80.387	ENSUMAG00000018317	CLP1	97	80.387	Ursus_maritimus
ENSPKIG00000007697	clp1	100	77.169	ENSVVUG00000017138	CLP1	99	77.169	Vulpes_vulpes
ENSPKIG00000007697	clp1	95	74.224	ENSXETG00000007088	clp1	95	75.422	Xenopus_tropicalis
ENSPKIG00000007697	clp1	100	85.393	ENSXCOG00000002287	clp1	100	84.719	Xiphophorus_couchianus
ENSPKIG00000007697	clp1	100	85.393	ENSXMAG00000009783	clp1	100	84.719	Xiphophorus_maculatus