EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000007770 (Gene tree)
Gene ID
111856328
Gene Symbol
SMARCA4
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
14048 bases
Position
chrPGUA01000306.1:609414-623461
Accession
111856328
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000024860ResIIIPF04851.157.5e-1011
ENSPKIP00000024754ResIIIPF04851.158.8e-1011
ENSPKIP00000024684ResIIIPF04851.159.1e-1011
ENSPKIP00000024754BRKPF07533.167.8e-1711
ENSPKIP00000024684BRKPF07533.167.9e-1711
ENSPKIP00000024860BRKPF07533.165.9e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000005471SMARCA4-2025747XM_023836194ENSPKIP000000247541630 (aa)XP_023691962UPI000CD5D445
ENSPKIT00000005397SMARCA4-2016497-ENSPKIP000000246841642 (aa)--
ENSPKIT00000005581SMARCA4-2034596-ENSPKIP000000248601531 (aa)--
Gene Model
Click here to download ENSPKIG00000007770's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007770's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000007770SMARCA410072.667ENSPKIG00000018469-9573.740
ENSPKIG00000007770SMARCA49889.774ENSPKIG00000010087-9789.234
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000007770SMARCA410088.200ENSG00000127616SMARCA4100100.000Homo_sapiens
ENSPKIG00000007770SMARCA49586.116ENSAPOG00000004542SMARCA49987.196Acanthochromis_polyacanthus
ENSPKIG00000007770SMARCA47689.952ENSAPOG00000003509smarca4a9887.857Acanthochromis_polyacanthus
ENSPKIG00000007770SMARCA410083.899ENSAMEG00000010868SMARCA410084.075Ailuropoda_melanoleuca
ENSPKIG00000007770SMARCA49990.136ENSACIG00000021550smarca4a9890.081Amphilophus_citrinellus
ENSPKIG00000007770SMARCA49486.367ENSACIG00000003035-9787.015Amphilophus_citrinellus
ENSPKIG00000007770SMARCA49487.264ENSAOCG00000009450-9787.889Amphiprion_ocellaris
ENSPKIG00000007770SMARCA48888.905ENSAOCG00000019167smarca4a10088.985Amphiprion_ocellaris
ENSPKIG00000007770SMARCA48888.977ENSAPEG00000015559smarca4a10089.057Amphiprion_percula
ENSPKIG00000007770SMARCA49887.025ENSAPEG00000023108-9887.639Amphiprion_percula
ENSPKIG00000007770SMARCA410085.904ENSATEG00000001094-9987.755Anabas_testudineus
ENSPKIG00000007770SMARCA410089.805ENSATEG00000011524smarca4a10090.049Anabas_testudineus
ENSPKIG00000007770SMARCA49987.877ENSANAG00000036991SMARCA410085.291Aotus_nancymaae
ENSPKIG00000007770SMARCA49989.814ENSACLG00000000163smarca4a9890.373Astatotilapia_calliptera
ENSPKIG00000007770SMARCA49586.730ENSACLG00000008638-9886.817Astatotilapia_calliptera
ENSPKIG00000007770SMARCA49488.231ENSAMXG00000011238-9588.881Astyanax_mexicanus
ENSPKIG00000007770SMARCA49688.231ENSAMXG00000021023smarca4a9988.363Astyanax_mexicanus
ENSPKIG00000007770SMARCA410088.584ENSBTAG00000019220SMARCA410088.278Bos_taurus
ENSPKIG00000007770SMARCA410084.737ENSCJAG00000005936SMARCA410084.269Callithrix_jacchus
ENSPKIG00000007770SMARCA410088.085ENSCAFG00000017584SMARCA410088.085Canis_familiaris
ENSPKIG00000007770SMARCA410086.691ENSCAFG00020024620SMARCA49988.085Canis_lupus_dingo
ENSPKIG00000007770SMARCA410084.756ENSCHIG00000015318SMARCA410084.573Capra_hircus
ENSPKIG00000007770SMARCA410087.912ENSTSYG00000012966SMARCA410088.095Carlito_syrichta
ENSPKIG00000007770SMARCA49383.678ENSCAPG00000015932SMARCA49490.885Cavia_aperea
ENSPKIG00000007770SMARCA410088.085ENSCPOG00000015549SMARCA410088.024Cavia_porcellus
ENSPKIG00000007770SMARCA410084.997ENSCCAG00000031660SMARCA49985.178Cebus_capucinus
ENSPKIG00000007770SMARCA410088.146ENSCATG00000029530SMARCA410088.085Cercocebus_atys
ENSPKIG00000007770SMARCA410088.088ENSCLAG00000011946SMARCA410088.332Chinchilla_lanigera
ENSPKIG00000007770SMARCA410088.139ENSCPBG00000009994SMARCA410087.949Chrysemys_picta_bellii
ENSPKIG00000007770SMARCA410088.085ENSCANG00000036013SMARCA410088.085Colobus_angolensis_palliatus
ENSPKIG00000007770SMARCA410088.085ENSCGRG00001016732Smarca410087.964Cricetulus_griseus_chok1gshd
ENSPKIG00000007770SMARCA410088.085ENSCGRG00000017242Smarca410087.964Cricetulus_griseus_crigri
ENSPKIG00000007770SMARCA49688.508ENSCSEG00000014771smarca4a9788.328Cynoglossus_semilaevis
ENSPKIG00000007770SMARCA49984.663ENSCVAG00000003018-9885.476Cyprinodon_variegatus
ENSPKIG00000007770SMARCA49988.717ENSCVAG00000006979smarca4a9988.662Cyprinodon_variegatus
ENSPKIG00000007770SMARCA49285.515ENSDARG00000104339SMARCA49485.904Danio_rerio
ENSPKIG00000007770SMARCA410091.004ENSDARG00000077226smarca4a10090.881Danio_rerio
ENSPKIG00000007770SMARCA410079.486ENSDNOG00000048847SMARCA49092.000Dasypus_novemcinctus
ENSPKIG00000007770SMARCA48581.980ENSDORG00000002544Smarca49183.008Dipodomys_ordii
ENSPKIG00000007770SMARCA49476.366ENSETEG00000013361SMARCA49476.493Echinops_telfairi
ENSPKIG00000007770SMARCA410088.207ENSEASG00005006167SMARCA410086.250Equus_asinus_asinus
ENSPKIG00000007770SMARCA410088.267ENSECAG00000008334SMARCA410088.146Equus_caballus
ENSPKIG00000007770SMARCA49880.878ENSELUG00000023232-9779.722Esox_lucius
ENSPKIG00000007770SMARCA410089.569ENSELUG00000010247smarca4a9788.972Esox_lucius
ENSPKIG00000007770SMARCA410088.046ENSFCAG00000004894SMARCA410087.985Felis_catus
ENSPKIG00000007770SMARCA49185.007ENSFALG00000004208SMARCA49285.126Ficedula_albicollis
ENSPKIG00000007770SMARCA49287.798ENSFDAG00000012237SMARCA49788.064Fukomys_damarensis
ENSPKIG00000007770SMARCA49687.759ENSFHEG00000010182smarca4a10087.093Fundulus_heteroclitus
ENSPKIG00000007770SMARCA410086.423ENSFHEG00000007902-9986.841Fundulus_heteroclitus
ENSPKIG00000007770SMARCA48885.593ENSGMOG00000002649smarca4a9485.460Gadus_morhua
ENSPKIG00000007770SMARCA49282.075ENSGMOG00000005756-9080.944Gadus_morhua
ENSPKIG00000007770SMARCA47387.148ENSGALG00000047145SMARCA410087.065Gallus_gallus
ENSPKIG00000007770SMARCA49885.323ENSGAFG00000008827-9885.975Gambusia_affinis
ENSPKIG00000007770SMARCA48889.593ENSGAFG00000014900smarca4a9987.383Gambusia_affinis
ENSPKIG00000007770SMARCA49981.149ENSGACG00000016033-9681.049Gasterosteus_aculeatus
ENSPKIG00000007770SMARCA49888.507ENSGACG00000006691smarca4a9787.713Gasterosteus_aculeatus
ENSPKIG00000007770SMARCA410088.300ENSGAGG00000016757SMARCA410088.110Gopherus_agassizii
ENSPKIG00000007770SMARCA410088.146ENSGGOG00000009882SMARCA410088.085Gorilla_gorilla
ENSPKIG00000007770SMARCA410090.570ENSHBUG00000021172smarca4a10089.781Haplochromis_burtoni
ENSPKIG00000007770SMARCA49986.574ENSHBUG00000005447-9986.959Haplochromis_burtoni
ENSPKIG00000007770SMARCA410086.775ENSHGLG00000010519SMARCA410087.712Heterocephalus_glaber_female
ENSPKIG00000007770SMARCA410087.675ENSHGLG00100013774SMARCA410087.371Heterocephalus_glaber_male
ENSPKIG00000007770SMARCA49390.237ENSHCOG00000009510smarca4a9690.424Hippocampus_comes
ENSPKIG00000007770SMARCA49687.468ENSIPUG00000016346-9587.443Ictalurus_punctatus
ENSPKIG00000007770SMARCA410090.648ENSIPUG00000006107smarca4a10091.182Ictalurus_punctatus
ENSPKIG00000007770SMARCA410088.024ENSSTOG00000007939SMARCA410087.964Ictidomys_tridecemlineatus
ENSPKIG00000007770SMARCA410085.936ENSJJAG00000012877Smarca410085.638Jaculus_jaculus
ENSPKIG00000007770SMARCA49986.005ENSKMAG00000019518-9488.133Kryptolebias_marmoratus
ENSPKIG00000007770SMARCA410089.229ENSKMAG00000011931smarca4a10088.659Kryptolebias_marmoratus
ENSPKIG00000007770SMARCA49586.945ENSLBEG00000017383smarca4a9786.236Labrus_bergylta
ENSPKIG00000007770SMARCA49485.759ENSLBEG00000020655-9885.578Labrus_bergylta
ENSPKIG00000007770SMARCA45282.767ENSLACG00000015309SMARCA410082.181Latimeria_chalumnae
ENSPKIG00000007770SMARCA410088.142ENSLOCG00000007820smarca4a9987.353Lepisosteus_oculatus
ENSPKIG00000007770SMARCA410087.985ENSLAFG00000001433SMARCA410087.925Loxodonta_africana
ENSPKIG00000007770SMARCA410086.751ENSMFAG00000032146SMARCA49988.085Macaca_fascicularis
ENSPKIG00000007770SMARCA410088.146ENSMMUG00000012042SMARCA49593.116Macaca_mulatta
ENSPKIG00000007770SMARCA410088.192ENSMNEG00000028512SMARCA410088.131Macaca_nemestrina
ENSPKIG00000007770SMARCA410087.925ENSMLEG00000034976SMARCA410087.864Mandrillus_leucophaeus
ENSPKIG00000007770SMARCA49985.360ENSMAMG00000002841-9888.175Mastacembelus_armatus
ENSPKIG00000007770SMARCA410090.190ENSMAMG00000009256smarca4a10090.159Mastacembelus_armatus
ENSPKIG00000007770SMARCA410090.453ENSMZEG00005003889smarca4a10089.726Maylandia_zebra
ENSPKIG00000007770SMARCA49587.334ENSMZEG00005023861-9887.547Maylandia_zebra
ENSPKIG00000007770SMARCA410087.803ENSMAUG00000020731Smarca410087.682Mesocricetus_auratus
ENSPKIG00000007770SMARCA410087.985ENSMICG00000009806SMARCA410087.925Microcebus_murinus
ENSPKIG00000007770SMARCA410087.561ENSMOCG00000022209Smarca410087.561Microtus_ochrogaster
ENSPKIG00000007770SMARCA49886.723ENSMMOG00000008466-9886.680Mola_mola
ENSPKIG00000007770SMARCA49588.752ENSMMOG00000007571smarca4a9888.674Mola_mola
ENSPKIG00000007770SMARCA410086.798ENSMODG00000006287SMARCA410086.380Monodelphis_domestica
ENSPKIG00000007770SMARCA48984.510ENSMALG00000021534-9985.653Monopterus_albus
ENSPKIG00000007770SMARCA49689.690ENSMALG00000003388smarca4a10089.628Monopterus_albus
ENSPKIG00000007770SMARCA410087.956MGP_CAROLIEiJ_G0031879Smarca410087.835Mus_caroli
ENSPKIG00000007770SMARCA410087.956ENSMUSG00000032187Smarca410087.835Mus_musculus
ENSPKIG00000007770SMARCA410087.393MGP_PahariEiJ_G0014745Smarca410087.881Mus_pahari
ENSPKIG00000007770SMARCA410087.956MGP_SPRETEiJ_G0033003Smarca410087.835Mus_spretus
ENSPKIG00000007770SMARCA410088.085ENSMPUG00000005711SMARCA410088.024Mustela_putorius_furo
ENSPKIG00000007770SMARCA410088.267ENSMLUG00000004491-10088.207Myotis_lucifugus
ENSPKIG00000007770SMARCA410086.991ENSNGAG00000021852Smarca410087.705Nannospalax_galili
ENSPKIG00000007770SMARCA49489.919ENSNBRG00000011457smarca4a9689.986Neolamprologus_brichardi
ENSPKIG00000007770SMARCA48985.205ENSNBRG00000018865-9986.529Neolamprologus_brichardi
ENSPKIG00000007770SMARCA49585.240ENSNLEG00000012389SMARCA49485.339Nomascus_leucogenys
ENSPKIG00000007770SMARCA481100.000ENSOPRG00000000885-79100.000Ochotona_princeps
ENSPKIG00000007770SMARCA410085.602ENSODEG00000017127SMARCA410085.394Octodon_degus
ENSPKIG00000007770SMARCA49986.755ENSONIG00000018040-9987.142Oreochromis_niloticus
ENSPKIG00000007770SMARCA410090.232ENSONIG00000008196smarca4a10089.435Oreochromis_niloticus
ENSPKIG00000007770SMARCA49882.896ENSOCUG00000001787SMARCA49882.843Oryctolagus_cuniculus
ENSPKIG00000007770SMARCA49586.157ENSORLG00000003955-9586.355Oryzias_latipes
ENSPKIG00000007770SMARCA49689.023ENSORLG00000015452smarca4a10088.142Oryzias_latipes
ENSPKIG00000007770SMARCA49586.229ENSORLG00020009728-9586.490Oryzias_latipes_hni
ENSPKIG00000007770SMARCA49688.261ENSORLG00020004611smarca4a10088.142Oryzias_latipes_hni
ENSPKIG00000007770SMARCA49688.135ENSORLG00015016560smarca4a10088.020Oryzias_latipes_hsok
ENSPKIG00000007770SMARCA49985.879ENSORLG00015007739-9586.418Oryzias_latipes_hsok
ENSPKIG00000007770SMARCA49686.035ENSOMEG00000016626-9586.671Oryzias_melastigma
ENSPKIG00000007770SMARCA410089.393ENSOMEG00000007486smarca4a10088.855Oryzias_melastigma
ENSPKIG00000007770SMARCA48985.589ENSOGAG00000016148SMARCA410086.635Otolemur_garnettii
ENSPKIG00000007770SMARCA410087.919ENSOARG00000017454SMARCA49787.886Ovis_aries
ENSPKIG00000007770SMARCA410088.146ENSPPAG00000043191SMARCA410088.085Pan_paniscus
ENSPKIG00000007770SMARCA410088.046ENSPPRG00000000064SMARCA410087.985Panthera_pardus
ENSPKIG00000007770SMARCA47986.917ENSPTIG00000017447SMARCA410081.710Panthera_tigris_altaica
ENSPKIG00000007770SMARCA410088.146ENSPTRG00000010488SMARCA410088.085Pan_troglodytes
ENSPKIG00000007770SMARCA410086.938ENSPANG00000011042SMARCA49988.253Papio_anubis
ENSPKIG00000007770SMARCA410082.946ENSPSIG00000005547SMARCA410083.004Pelodiscus_sinensis
ENSPKIG00000007770SMARCA410087.743ENSPEMG00000020389Smarca410087.621Peromyscus_maniculatus_bairdii
ENSPKIG00000007770SMARCA410088.429ENSPCIG00000017138SMARCA410088.429Phascolarctos_cinereus
ENSPKIG00000007770SMARCA410086.236ENSPFOG00000012930-9986.667Poecilia_formosa
ENSPKIG00000007770SMARCA410087.220ENSPFOG00000007892smarca4a10087.530Poecilia_formosa
ENSPKIG00000007770SMARCA49986.957ENSPLAG00000018616-9887.376Poecilia_latipinna
ENSPKIG00000007770SMARCA410087.280ENSPLAG00000014294smarca4a10087.591Poecilia_latipinna
ENSPKIG00000007770SMARCA49587.890ENSPMEG00000003725smarca4a9788.599Poecilia_mexicana
ENSPKIG00000007770SMARCA49885.321ENSPMEG00000008929-9787.729Poecilia_mexicana
ENSPKIG00000007770SMARCA49885.733ENSPREG00000014823-9886.544Poecilia_reticulata
ENSPKIG00000007770SMARCA410087.183ENSPREG00000014608smarca4a10087.976Poecilia_reticulata
ENSPKIG00000007770SMARCA410085.553ENSPPYG00000009568SMARCA410085.876Pongo_abelii
ENSPKIG00000007770SMARCA47988.079ENSPCAG00000014054SMARCA47592.248Procavia_capensis
ENSPKIG00000007770SMARCA410087.925ENSPCOG00000023011SMARCA410087.985Propithecus_coquereli
ENSPKIG00000007770SMARCA49584.173ENSPVAG00000007787SMARCA49683.993Pteropus_vampyrus
ENSPKIG00000007770SMARCA49585.235ENSPNYG00000023995-9886.823Pundamilia_nyererei
ENSPKIG00000007770SMARCA49889.518ENSPNYG00000000717smarca4a9689.955Pundamilia_nyererei
ENSPKIG00000007770SMARCA49688.904ENSPNAG00000024136smarca4a9789.564Pygocentrus_nattereri
ENSPKIG00000007770SMARCA49587.910ENSPNAG00000006636-9488.431Pygocentrus_nattereri
ENSPKIG00000007770SMARCA410087.956ENSRNOG00000009271Smarca410087.835Rattus_norvegicus
ENSPKIG00000007770SMARCA410086.691ENSRBIG00000038696SMARCA49988.024Rhinopithecus_bieti
ENSPKIG00000007770SMARCA410088.085ENSRROG00000045509SMARCA410088.024Rhinopithecus_roxellana
ENSPKIG00000007770SMARCA49988.047ENSSBOG00000026896SMARCA49888.390Saimiri_boliviensis_boliviensis
ENSPKIG00000007770SMARCA410088.307ENSSHAG00000001642SMARCA410088.307Sarcophilus_harrisii
ENSPKIG00000007770SMARCA49686.785ENSSFOG00015009921-9686.824Scleropages_formosus
ENSPKIG00000007770SMARCA410094.547ENSSFOG00015013823smarca410094.179Scleropages_formosus
ENSPKIG00000007770SMARCA49983.728ENSSMAG00000014082-9984.587Scophthalmus_maximus
ENSPKIG00000007770SMARCA49888.042ENSSMAG00000003200smarca4a10088.445Scophthalmus_maximus
ENSPKIG00000007770SMARCA410085.497ENSSDUG00000017298smarca4a10085.158Seriola_dumerili
ENSPKIG00000007770SMARCA49987.277ENSSDUG00000005388-9887.414Seriola_dumerili
ENSPKIG00000007770SMARCA410089.758ENSSLDG00000024486smarca4a10089.703Seriola_lalandi_dorsalis
ENSPKIG00000007770SMARCA49587.379ENSSLDG00000023663-9788.504Seriola_lalandi_dorsalis
ENSPKIG00000007770SMARCA46596.894ENSSARG00000013477SMARCA48196.894Sorex_araneus
ENSPKIG00000007770SMARCA49584.831ENSSPUG00000004558SMARCA49884.542Sphenodon_punctatus
ENSPKIG00000007770SMARCA410089.636ENSSPAG00000004248smarca4a10089.643Stegastes_partitus
ENSPKIG00000007770SMARCA49985.341ENSSPAG00000012533-9986.607Stegastes_partitus
ENSPKIG00000007770SMARCA410088.350ENSSSCG00000013629SMARCA410088.046Sus_scrofa
ENSPKIG00000007770SMARCA48983.573ENSTRUG00000004885smarca4a9684.735Takifugu_rubripes
ENSPKIG00000007770SMARCA49584.968ENSTRUG00000001378SMARCA49885.950Takifugu_rubripes
ENSPKIG00000007770SMARCA49983.908ENSTNIG00000004536SMARCA49984.630Tetraodon_nigroviridis
ENSPKIG00000007770SMARCA47387.234ENSTNIG00000004859-10087.234Tetraodon_nigroviridis
ENSPKIG00000007770SMARCA410085.382ENSTTRG00000009519SMARCA410084.606Tursiops_truncatus
ENSPKIG00000007770SMARCA410088.146ENSUAMG00000014661SMARCA410088.085Ursus_americanus
ENSPKIG00000007770SMARCA410080.832ENSUMAG00000022005SMARCA49991.383Ursus_maritimus
ENSPKIG00000007770SMARCA410086.691ENSVVUG00000017820SMARCA49788.085Vulpes_vulpes
ENSPKIG00000007770SMARCA410083.223ENSXETG00000009355smarca49982.805Xenopus_tropicalis
ENSPKIG00000007770SMARCA49886.216ENSXCOG00000013494-9886.550Xiphophorus_couchianus
ENSPKIG00000007770SMARCA410087.303ENSXMAG00000006321smarca4a10087.138Xiphophorus_maculatus
ENSPKIG00000007770SMARCA410086.763ENSXMAG00000007030-9987.020Xiphophorus_maculatus

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