EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007777 (Gene tree)
Gene ID: 111852596
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 50858 bases
Position: chrPGUA01000242.1:648076-698933
Accession: 111852596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000024619	AF-4	PF05110.13	1.3e-289	1	3
ENSPKIP00000024619	AF-4	PF05110.13	1.3e-289	2	3
ENSPKIP00000024619	AF-4	PF05110.13	1.3e-289	3	3
ENSPKIP00000024668	AF-4	PF05110.13	6.3e-288	1	2
ENSPKIP00000024668	AF-4	PF05110.13	6.3e-288	2	2
ENSPKIP00000024723	AF-4	PF05110.13	1.1e-255	1	3
ENSPKIP00000024723	AF-4	PF05110.13	1.1e-255	2	3
ENSPKIP00000024723	AF-4	PF05110.13	1.1e-255	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000005381	-	4090	XM_023828695	ENSPKIP00000024668	1149 (aa)	XP_023684463	UPI000CD665A4
ENSPKIT00000005329	-	4983	-	ENSPKIP00000024619	1138 (aa)	XP_023684464	UPI000CD5F624
ENSPKIT00000005437	-	3210	-	ENSPKIP00000024723	1069 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000007777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007777	-	60	45.455	ENSPKIG00000024325	AFF4	71	47.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007777	-	55	57.490	ENSAPOG00000002994	-	52	57.490	Acanthochromis_polyacanthus
ENSPKIG00000007777	-	55	47.561	ENSACIG00000022732	aff2	60	50.207	Amphilophus_citrinellus
ENSPKIG00000007777	-	53	39.950	ENSACIG00000021066	-	53	85.294	Amphilophus_citrinellus
ENSPKIG00000007777	-	99	37.939	ENSAOCG00000020283	-	93	56.071	Amphiprion_ocellaris
ENSPKIG00000007777	-	99	38.160	ENSAPEG00000018794	-	93	56.071	Amphiprion_percula
ENSPKIG00000007777	-	99	37.341	ENSATEG00000015552	-	86	56.383	Anabas_testudineus
ENSPKIG00000007777	-	57	60.000	ENSAPLG00000004059	AFF1	74	52.439	Anas_platyrhynchos
ENSPKIG00000007777	-	72	53.147	ENSACAG00000010688	AFF2	56	50.579	Anolis_carolinensis
ENSPKIG00000007777	-	52	55.474	ENSACAG00000012192	AFF1	92	48.611	Anolis_carolinensis
ENSPKIG00000007777	-	56	47.479	ENSANAG00000023509	AFF2	59	47.479	Aotus_nancymaae
ENSPKIG00000007777	-	51	49.758	ENSANAG00000017095	AFF1	81	54.589	Aotus_nancymaae
ENSPKIG00000007777	-	55	57.143	ENSACLG00000002905	-	91	56.274	Astatotilapia_calliptera
ENSPKIG00000007777	-	65	66.111	ENSAMXG00000015641	-	72	65.957	Astyanax_mexicanus
ENSPKIG00000007777	-	54	49.587	ENSBTAG00000012449	AFF3	58	49.805	Bos_taurus
ENSPKIG00000007777	-	55	48.780	ENSCJAG00000006047	AFF1	83	52.846	Callithrix_jacchus
ENSPKIG00000007777	-	56	47.479	ENSCJAG00000000061	AFF2	78	47.479	Callithrix_jacchus
ENSPKIG00000007777	-	55	48.163	ENSCAFG00000023079	AFF3	58	49.615	Canis_familiaris
ENSPKIG00000007777	-	50	63.095	ENSCAFG00000009476	AFF1	69	69.333	Canis_familiaris
ENSPKIG00000007777	-	54	49.587	ENSCHIG00000026653	AFF3	58	49.805	Capra_hircus
ENSPKIG00000007777	-	54	48.163	ENSCPOG00000006346	AFF3	65	51.515	Cavia_porcellus
ENSPKIG00000007777	-	70	60.256	ENSCCAG00000027623	AFF1	97	41.058	Cebus_capucinus
ENSPKIG00000007777	-	56	47.479	ENSCATG00000040342	AFF2	57	47.479	Cercocebus_atys
ENSPKIG00000007777	-	64	48.347	ENSCLAG00000017100	AFF3	70	50.826	Chinchilla_lanigera
ENSPKIG00000007777	-	56	47.479	ENSCSAG00000007248	AFF2	57	47.479	Chlorocebus_sabaeus
ENSPKIG00000007777	-	79	50.746	ENSCPBG00000005382	AFF1	86	53.309	Chrysemys_picta_bellii
ENSPKIG00000007777	-	59	47.917	ENSCPBG00000020831	AFF2	57	50.781	Chrysemys_picta_bellii
ENSPKIG00000007777	-	61	36.304	ENSCGRG00000004837	Aff1	65	47.552	Cricetulus_griseus_crigri
ENSPKIG00000007777	-	52	66.000	ENSDNOG00000048783	-	65	66.000	Dasypus_novemcinctus
ENSPKIG00000007777	-	82	50.403	ENSEASG00005012760	AFF1	86	50.000	Equus_asinus_asinus
ENSPKIG00000007777	-	68	62.162	ENSECAG00000003619	AFF1	82	55.346	Equus_caballus
ENSPKIG00000007777	-	59	53.731	ENSELUG00000023871	aff4	83	47.718	Esox_lucius
ENSPKIG00000007777	-	90	68.163	ENSELUG00000019953	-	83	71.138	Esox_lucius
ENSPKIG00000007777	-	80	42.339	ENSFALG00000005554	AFF1	86	46.350	Ficedula_albicollis
ENSPKIG00000007777	-	67	47.656	ENSGALG00000009168	AFF2	69	50.391	Gallus_gallus
ENSPKIG00000007777	-	91	61.250	ENSGALG00000043935	AFF1	50	50.826	Gallus_gallus
ENSPKIG00000007777	-	99	35.800	ENSGACG00000016333	-	85	56.506	Gasterosteus_aculeatus
ENSPKIG00000007777	-	92	56.274	ENSHBUG00000005828	-	91	56.274	Haplochromis_burtoni
ENSPKIG00000007777	-	50	65.152	ENSHGLG00000001384	AFF1	70	49.187	Heterocephalus_glaber_female
ENSPKIG00000007777	-	100	34.860	ENSHCOG00000000539	-	99	34.882	Hippocampus_comes
ENSPKIG00000007777	-	54	48.347	ENSSTOG00000012140	AFF3	61	50.000	Ictidomys_tridecemlineatus
ENSPKIG00000007777	-	54	47.934	ENSJJAG00000013155	Aff3	65	51.515	Jaculus_jaculus
ENSPKIG00000007777	-	66	47.479	ENSJJAG00000022176	Aff2	58	47.479	Jaculus_jaculus
ENSPKIG00000007777	-	56	59.274	ENSKMAG00000013113	-	57	58.431	Kryptolebias_marmoratus
ENSPKIG00000007777	-	99	36.234	ENSLBEG00000016928	-	89	53.268	Labrus_bergylta
ENSPKIG00000007777	-	99	38.902	ENSLACG00000007303	AFF1	99	38.964	Latimeria_chalumnae
ENSPKIG00000007777	-	86	64.050	ENSLOCG00000004025	AFF1	93	65.972	Lepisosteus_oculatus
ENSPKIG00000007777	-	99	38.226	ENSMAMG00000016189	-	90	56.146	Mastacembelus_armatus
ENSPKIG00000007777	-	92	56.274	ENSMZEG00005020442	-	91	56.274	Maylandia_zebra
ENSPKIG00000007777	-	55	55.224	ENSMGAG00000009144	AFF4	68	55.224	Meleagris_gallopavo
ENSPKIG00000007777	-	84	35.645	ENSMGAG00000007646	AFF1	52	50.413	Meleagris_gallopavo
ENSPKIG00000007777	-	64	47.082	ENSMICG00000011580	AFF2	61	47.082	Microcebus_murinus
ENSPKIG00000007777	-	59	66.667	ENSMOCG00000017389	Aff1	58	66.667	Microtus_ochrogaster
ENSPKIG00000007777	-	54	45.902	ENSMMOG00000010019	aff2	62	46.718	Mola_mola
ENSPKIG00000007777	-	59	52.174	ENSMALG00000017690	aff4	62	52.941	Monopterus_albus
ENSPKIG00000007777	-	99	37.560	ENSMALG00000002436	-	77	55.442	Monopterus_albus
ENSPKIG00000007777	-	54	45.868	ENSMUSG00000037138	Aff3	57	50.826	Mus_musculus
ENSPKIG00000007777	-	54	47.347	ENSNGAG00000002408	Aff3	55	50.000	Nannospalax_galili
ENSPKIG00000007777	-	55	47.917	ENSOPRG00000017154	-	53	48.971	Ochotona_princeps
ENSPKIG00000007777	-	52	47.479	ENSODEG00000009737	AFF2	84	47.431	Octodon_degus
ENSPKIG00000007777	-	76	40.039	ENSONIG00000007636	-	56	55.639	Oreochromis_niloticus
ENSPKIG00000007777	-	70	63.636	ENSORLG00020003991	-	86	63.636	Oryzias_latipes_hni
ENSPKIG00000007777	-	63	65.333	ENSPTIG00000011838	AFF1	51	67.143	Panthera_tigris_altaica
ENSPKIG00000007777	-	56	47.479	ENSPANG00000002926	AFF2	57	47.479	Papio_anubis
ENSPKIG00000007777	-	85	66.250	ENSPSIG00000003759	AFF1	88	47.797	Pelodiscus_sinensis
ENSPKIG00000007777	-	59	55.814	ENSPSIG00000010309	AFF2	55	55.629	Pelodiscus_sinensis
ENSPKIG00000007777	-	54	48.347	ENSPEMG00000014802	Aff3	65	48.485	Peromyscus_maniculatus_bairdii
ENSPKIG00000007777	-	51	49.174	ENSPMAG00000007807	aff4	68	51.653	Petromyzon_marinus
ENSPKIG00000007777	-	61	53.177	ENSPFOG00000004581	-	61	54.643	Poecilia_formosa
ENSPKIG00000007777	-	58	53.156	ENSPREG00000003514	-	61	54.643	Poecilia_reticulata
ENSPKIG00000007777	-	54	48.361	ENSRROG00000045716	AFF1	83	51.639	Rhinopithecus_roxellana
ENSPKIG00000007777	-	67	38.004	ENSSHAG00000013198	AFF4	74	47.670	Sarcophilus_harrisii
ENSPKIG00000007777	-	87	71.605	ENSSFOG00015021743	-	83	71.605	Scleropages_formosus
ENSPKIG00000007777	-	99	36.574	ENSSMAG00000007062	-	95	38.402	Scophthalmus_maximus
ENSPKIG00000007777	-	99	36.118	ENSSLDG00000006836	-	88	57.193	Seriola_lalandi_dorsalis
ENSPKIG00000007777	-	91	62.162	ENSSPUG00000001574	AFF1	87	50.352	Sphenodon_punctatus
ENSPKIG00000007777	-	78	35.463	ENSSPUG00000012215	AFF4	62	32.210	Sphenodon_punctatus
ENSPKIG00000007777	-	97	37.521	ENSSPAG00000003972	-	90	56.967	Stegastes_partitus
ENSPKIG00000007777	-	68	55.952	ENSSSCG00000023593	AFF1	53	59.184	Sus_scrofa
ENSPKIG00000007777	-	59	67.742	ENSTGUG00000004690	AFF2	63	62.821	Taeniopygia_guttata
ENSPKIG00000007777	-	92	40.152	ENSTGUG00000002726	AFF1	84	45.902	Taeniopygia_guttata
ENSPKIG00000007777	-	86	55.417	ENSTNIG00000007537	-	87	54.874	Tetraodon_nigroviridis
ENSPKIG00000007777	-	55	46.122	ENSTTRG00000014061	AFF3	59	47.692	Tursiops_truncatus
ENSPKIG00000007777	-	63	47.826	ENSUMAG00000009395	AFF2	51	47.826	Ursus_maritimus
ENSPKIG00000007777	-	55	48.163	ENSVVUG00000028696	AFF3	61	49.615	Vulpes_vulpes
ENSPKIG00000007777	-	91	52.459	ENSXETG00000019955	aff1	85	58.781	Xenopus_tropicalis
ENSPKIG00000007777	-	61	52.013	ENSXMAG00000004657	-	61	52.962	Xiphophorus_maculatus