EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000007989 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 86688 bases
Position: chrPGUA01000180.1:1206240-1292927
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000024934	RRM_1	PF00076.22	6.9e-32	1	2
ENSPKIP00000024934	RRM_1	PF00076.22	6.9e-32	2	2
ENSPKIP00000024953	RRM_1	PF00076.22	6.9e-32	1	2
ENSPKIP00000024953	RRM_1	PF00076.22	6.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000005656	-	4050	-	ENSPKIP00000024934	255 (aa)	-	-
ENSPKIT00000005675	-	4093	-	ENSPKIP00000024953	255 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000007989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000007989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000007989	-	70	39.286	ENSPKIG00000012324	celf1	53	39.286
ENSPKIG00000007989	-	66	35.838	ENSPKIG00000003894	ELAVL1	86	35.838
ENSPKIG00000007989	-	74	35.714	ENSPKIG00000016207	elavl3	55	35.714
ENSPKIG00000007989	-	100	74.632	ENSPKIG00000001498	rbms1a	67	74.632
ENSPKIG00000007989	-	69	35.227	ENSPKIG00000019554	-	52	35.227
ENSPKIG00000007989	-	66	36.416	ENSPKIG00000023897	-	90	36.416
ENSPKIG00000007989	-	67	35.227	ENSPKIG00000010833	celf3a	55	35.227
ENSPKIG00000007989	-	69	35.227	ENSPKIG00000004198	si:dkey-205h23.2	55	35.227
ENSPKIG00000007989	-	82	35.484	ENSPKIG00000006999	elavl4	67	36.788
ENSPKIG00000007989	-	73	37.879	ENSPKIG00000006187	ELAVL2	65	38.144
ENSPKIG00000007989	-	81	93.750	ENSPKIG00000016025	-	73	93.750
ENSPKIG00000007989	-	82	84.834	ENSPKIG00000006676	rbms2a	60	80.672
ENSPKIG00000007989	-	71	38.342	ENSPKIG00000001903	-	69	38.144
ENSPKIG00000007989	-	58	36.508	ENSPKIG00000024667	-	77	36.364
ENSPKIG00000007989	-	83	78.704	ENSPKIG00000012818	rbms1a	67	72.015
ENSPKIG00000007989	-	67	39.286	ENSPKIG00000025033	-	53	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000007989	-	100	87.500	ENSG00000144642	RBMS3	100	87.500	Homo_sapiens
ENSPKIG00000007989	-	100	85.019	ENSAPOG00000007266	rbms3	65	85.019	Acanthochromis_polyacanthus
ENSPKIG00000007989	-	100	92.636	ENSAPOG00000003432	-	62	92.636	Acanthochromis_polyacanthus
ENSPKIG00000007989	-	84	92.166	ENSACIG00000006987	-	59	92.166	Amphilophus_citrinellus
ENSPKIG00000007989	-	87	78.166	ENSACIG00000021113	RBMS3	73	80.628	Amphilophus_citrinellus
ENSPKIG00000007989	-	94	93.776	ENSAOCG00000024104	-	56	93.776	Amphiprion_ocellaris
ENSPKIG00000007989	-	100	84.701	ENSAOCG00000021274	rbms3	63	84.701	Amphiprion_ocellaris
ENSPKIG00000007989	-	87	83.761	ENSAPEG00000016299	rbms3	55	90.385	Amphiprion_percula
ENSPKIG00000007989	-	94	93.776	ENSAPEG00000009481	-	60	93.776	Amphiprion_percula
ENSPKIG00000007989	-	100	85.338	ENSATEG00000024295	rbms3	63	85.338	Anabas_testudineus
ENSPKIG00000007989	-	100	92.636	ENSATEG00000008433	-	62	92.636	Anabas_testudineus
ENSPKIG00000007989	-	100	88.213	ENSAPLG00000012270	RBMS3	61	88.593	Anas_platyrhynchos
ENSPKIG00000007989	-	100	88.213	ENSACAG00000028664	RBMS3	63	88.593	Anolis_carolinensis
ENSPKIG00000007989	-	100	87.500	ENSANAG00000021899	RBMS3	63	87.121	Aotus_nancymaae
ENSPKIG00000007989	-	94	93.776	ENSACLG00000008976	-	52	93.776	Astatotilapia_calliptera
ENSPKIG00000007989	-	100	85.283	ENSACLG00000018506	rbms3	63	85.283	Astatotilapia_calliptera
ENSPKIG00000007989	-	100	84.496	ENSAMXG00000043770	-	100	84.496	Astyanax_mexicanus
ENSPKIG00000007989	-	100	90.698	ENSAMXG00000020388	rbms3	73	92.019	Astyanax_mexicanus
ENSPKIG00000007989	-	100	87.500	ENSBTAG00000044062	RBMS3	63	87.500	Bos_taurus
ENSPKIG00000007989	-	100	87.500	ENSCJAG00000004312	RBMS3	63	87.500	Callithrix_jacchus
ENSPKIG00000007989	-	100	87.500	ENSCAFG00000005464	RBMS3	60	87.500	Canis_familiaris
ENSPKIG00000007989	-	100	87.500	ENSCAFG00020024980	RBMS3	89	86.466	Canis_lupus_dingo
ENSPKIG00000007989	-	100	87.500	ENSCHIG00000009144	RBMS3	63	87.500	Capra_hircus
ENSPKIG00000007989	-	62	88.820	ENSTSYG00000002615	RBMS3	51	88.820	Carlito_syrichta
ENSPKIG00000007989	-	75	93.194	ENSCAPG00000017783	RBMS3	58	90.741	Cavia_aperea
ENSPKIG00000007989	-	100	88.803	ENSCPOG00000006457	RBMS3	62	88.803	Cavia_porcellus
ENSPKIG00000007989	-	100	87.500	ENSCCAG00000008671	RBMS3	63	87.121	Cebus_capucinus
ENSPKIG00000007989	-	100	87.500	ENSCATG00000013222	RBMS3	63	87.121	Cercocebus_atys
ENSPKIG00000007989	-	100	87.500	ENSCLAG00000005866	RBMS3	63	87.500	Chinchilla_lanigera
ENSPKIG00000007989	-	100	88.973	ENSCPBG00000022678	RBMS3	69	88.973	Chrysemys_picta_bellii
ENSPKIG00000007989	-	100	87.500	ENSCANG00000032137	RBMS3	63	87.121	Colobus_angolensis_palliatus
ENSPKIG00000007989	-	100	88.417	ENSCGRG00001007243	Rbms3	64	88.417	Cricetulus_griseus_chok1gshd
ENSPKIG00000007989	-	100	88.417	ENSCGRG00000004599	Rbms3	64	88.417	Cricetulus_griseus_crigri
ENSPKIG00000007989	-	100	93.023	ENSCSEG00000014677	-	95	93.033	Cynoglossus_semilaevis
ENSPKIG00000007989	-	100	85.019	ENSCSEG00000010011	RBMS3	59	89.904	Cynoglossus_semilaevis
ENSPKIG00000007989	-	100	86.641	ENSCVAG00000022354	rbms3	62	86.641	Cyprinodon_variegatus
ENSPKIG00000007989	-	100	88.372	ENSCVAG00000022814	-	78	93.750	Cyprinodon_variegatus
ENSPKIG00000007989	-	100	91.860	ENSDARG00000044574	rbms3	94	94.074	Danio_rerio
ENSPKIG00000007989	-	100	87.500	ENSDNOG00000016645	RBMS3	66	87.500	Dasypus_novemcinctus
ENSPKIG00000007989	-	100	87.500	ENSDORG00000007220	Rbms3	63	87.500	Dipodomys_ordii
ENSPKIG00000007989	-	100	87.500	ENSEASG00005006152	RBMS3	69	87.500	Equus_asinus_asinus
ENSPKIG00000007989	-	100	87.500	ENSECAG00000017871	RBMS3	69	87.500	Equus_caballus
ENSPKIG00000007989	-	100	77.273	ENSEEUG00000014337	RBMS3	67	77.273	Erinaceus_europaeus
ENSPKIG00000007989	-	100	92.636	ENSELUG00000006905	-	98	93.033	Esox_lucius
ENSPKIG00000007989	-	100	85.338	ENSELUG00000002862	rbms3	63	85.393	Esox_lucius
ENSPKIG00000007989	-	100	87.500	ENSFCAG00000002130	RBMS3	63	87.500	Felis_catus
ENSPKIG00000007989	-	100	88.593	ENSFALG00000009165	RBMS3	63	88.973	Ficedula_albicollis
ENSPKIG00000007989	-	100	87.500	ENSFDAG00000008278	RBMS3	63	87.500	Fukomys_damarensis
ENSPKIG00000007989	-	93	74.089	ENSFHEG00000004787	RBMS3	55	80.288	Fundulus_heteroclitus
ENSPKIG00000007989	-	84	91.743	ENSGMOG00000002600	-	53	91.743	Gadus_morhua
ENSPKIG00000007989	-	100	88.593	ENSGALG00000011439	RBMS3	63	88.973	Gallus_gallus
ENSPKIG00000007989	-	100	85.932	ENSGAFG00000000168	rbms3	69	85.932	Gambusia_affinis
ENSPKIG00000007989	-	100	92.636	ENSGAFG00000003329	-	62	92.636	Gambusia_affinis
ENSPKIG00000007989	-	100	87.500	ENSGGOG00000007228	RBMS3	63	87.121	Gorilla_gorilla
ENSPKIG00000007989	-	100	85.283	ENSHBUG00000021196	rbms3	93	85.283	Haplochromis_burtoni
ENSPKIG00000007989	-	100	92.636	ENSHBUG00000019785	-	57	92.636	Haplochromis_burtoni
ENSPKIG00000007989	-	100	87.500	ENSHGLG00000002170	RBMS3	63	87.500	Heterocephalus_glaber_female
ENSPKIG00000007989	-	100	87.500	ENSHGLG00100014278	RBMS3	63	87.500	Heterocephalus_glaber_male
ENSPKIG00000007989	-	100	90.698	ENSHCOG00000007894	-	62	90.698	Hippocampus_comes
ENSPKIG00000007989	-	100	90.698	ENSIPUG00000017680	rbms3	62	90.698	Ictalurus_punctatus
ENSPKIG00000007989	-	100	87.879	ENSSTOG00000006324	RBMS3	63	87.879	Ictidomys_tridecemlineatus
ENSPKIG00000007989	-	100	84.848	ENSJJAG00000014708	Rbms3	63	85.227	Jaculus_jaculus
ENSPKIG00000007989	-	100	83.643	ENSKMAG00000020500	rbms3	63	83.643	Kryptolebias_marmoratus
ENSPKIG00000007989	-	100	92.248	ENSKMAG00000012586	-	62	92.248	Kryptolebias_marmoratus
ENSPKIG00000007989	-	100	92.636	ENSLBEG00000027388	-	62	92.636	Labrus_bergylta
ENSPKIG00000007989	-	100	89.695	ENSLACG00000010581	RBMS3	63	90.076	Latimeria_chalumnae
ENSPKIG00000007989	-	100	87.500	ENSLAFG00000000354	RBMS3	61	87.500	Loxodonta_africana
ENSPKIG00000007989	-	100	87.500	ENSMFAG00000033300	RBMS3	63	87.500	Macaca_fascicularis
ENSPKIG00000007989	-	100	87.500	ENSMMUG00000004404	RBMS3	63	87.500	Macaca_mulatta
ENSPKIG00000007989	-	100	87.500	ENSMNEG00000035839	RBMS3	63	87.121	Macaca_nemestrina
ENSPKIG00000007989	-	100	87.500	ENSMLEG00000029464	RBMS3	63	87.121	Mandrillus_leucophaeus
ENSPKIG00000007989	-	100	93.411	ENSMAMG00000002176	-	58	93.411	Mastacembelus_armatus
ENSPKIG00000007989	-	100	85.019	ENSMAMG00000024043	rbms3	65	85.019	Mastacembelus_armatus
ENSPKIG00000007989	-	100	92.636	ENSMZEG00005026469	-	58	92.636	Maylandia_zebra
ENSPKIG00000007989	-	100	85.283	ENSMZEG00005006308	rbms3	63	85.283	Maylandia_zebra
ENSPKIG00000007989	-	100	88.417	ENSMAUG00000016436	Rbms3	64	88.417	Mesocricetus_auratus
ENSPKIG00000007989	-	100	87.500	ENSMICG00000049249	RBMS3	63	87.500	Microcebus_murinus
ENSPKIG00000007989	-	100	89.105	ENSMOCG00000006997	Rbms3	64	89.105	Microtus_ochrogaster
ENSPKIG00000007989	-	87	84.052	ENSMMOG00000008471	RBMS3	57	89.904	Mola_mola
ENSPKIG00000007989	-	100	92.636	ENSMMOG00000015071	-	63	92.636	Mola_mola
ENSPKIG00000007989	-	100	81.955	ENSMODG00000015125	RBMS3	60	81.579	Monodelphis_domestica
ENSPKIG00000007989	-	100	85.019	ENSMALG00000019536	RBMS3	63	85.019	Monopterus_albus
ENSPKIG00000007989	-	100	93.411	ENSMALG00000009155	-	62	93.411	Monopterus_albus
ENSPKIG00000007989	-	100	87.645	MGP_CAROLIEiJ_G0032783	Rbms3	100	89.855	Mus_caroli
ENSPKIG00000007989	-	100	88.417	ENSMUSG00000039607	Rbms3	100	90.821	Mus_musculus
ENSPKIG00000007989	-	100	88.417	MGP_PahariEiJ_G0015650	Rbms3	100	90.821	Mus_pahari
ENSPKIG00000007989	-	100	88.417	MGP_SPRETEiJ_G0033930	Rbms3	100	90.821	Mus_spretus
ENSPKIG00000007989	-	100	87.500	ENSMPUG00000011956	RBMS3	61	87.500	Mustela_putorius_furo
ENSPKIG00000007989	-	100	87.500	ENSMLUG00000000659	RBMS3	63	87.500	Myotis_lucifugus
ENSPKIG00000007989	-	100	88.803	ENSNGAG00000014039	Rbms3	62	88.803	Nannospalax_galili
ENSPKIG00000007989	-	100	92.636	ENSNBRG00000018065	-	62	92.636	Neolamprologus_brichardi
ENSPKIG00000007989	-	100	87.500	ENSNLEG00000004129	RBMS3	63	87.121	Nomascus_leucogenys
ENSPKIG00000007989	-	100	77.358	ENSMEUG00000004772	RBMS3	61	77.358	Notamacropus_eugenii
ENSPKIG00000007989	-	100	87.500	ENSOPRG00000006808	RBMS3	52	87.500	Ochotona_princeps
ENSPKIG00000007989	-	100	87.121	ENSODEG00000003651	RBMS3	63	87.121	Octodon_degus
ENSPKIG00000007989	-	100	85.932	ENSONIG00000007172	rbms3	66	85.932	Oreochromis_niloticus
ENSPKIG00000007989	-	100	88.636	ENSOANG00000010529	RBMS3	60	88.636	Ornithorhynchus_anatinus
ENSPKIG00000007989	-	100	86.364	ENSOCUG00000004840	RBMS3	60	86.364	Oryctolagus_cuniculus
ENSPKIG00000007989	-	100	92.636	ENSORLG00000002306	-	63	92.166	Oryzias_latipes
ENSPKIG00000007989	-	100	84.411	ENSORLG00000005370	RBMS3	62	84.411	Oryzias_latipes
ENSPKIG00000007989	-	100	85.171	ENSORLG00020022674	RBMS3	87	86.385	Oryzias_latipes_hni
ENSPKIG00000007989	-	100	92.636	ENSORLG00020008496	-	62	92.636	Oryzias_latipes_hni
ENSPKIG00000007989	-	100	84.791	ENSORLG00015005509	rbms3	87	86.385	Oryzias_latipes_hsok
ENSPKIG00000007989	-	100	92.636	ENSORLG00015015719	-	62	92.636	Oryzias_latipes_hsok
ENSPKIG00000007989	-	87	92.857	ENSOMEG00000007677	-	63	92.627	Oryzias_melastigma
ENSPKIG00000007989	-	100	85.551	ENSOMEG00000014805	RBMS3	62	85.551	Oryzias_melastigma
ENSPKIG00000007989	-	100	87.500	ENSOARG00000014684	RBMS3	60	87.500	Ovis_aries
ENSPKIG00000007989	-	100	87.500	ENSPPAG00000036519	RBMS3	63	87.121	Pan_paniscus
ENSPKIG00000007989	-	100	87.121	ENSPPRG00000002761	RBMS3	63	86.742	Panthera_pardus
ENSPKIG00000007989	-	100	87.121	ENSPTIG00000011568	RBMS3	63	87.121	Panthera_tigris_altaica
ENSPKIG00000007989	-	100	87.500	ENSPTRG00000014709	RBMS3	63	87.500	Pan_troglodytes
ENSPKIG00000007989	-	100	87.500	ENSPANG00000010234	RBMS3	64	83.394	Papio_anubis
ENSPKIG00000007989	-	100	88.593	ENSPSIG00000005269	RBMS3	63	88.973	Pelodiscus_sinensis
ENSPKIG00000007989	-	87	84.783	ENSPMGG00000021544	rbms3	54	89.904	Periophthalmus_magnuspinnatus
ENSPKIG00000007989	-	87	92.411	ENSPMGG00000021683	-	71	94.611	Periophthalmus_magnuspinnatus
ENSPKIG00000007989	-	94	89.627	ENSPEMG00000001117	Rbms3	61	89.627	Peromyscus_maniculatus_bairdii
ENSPKIG00000007989	-	100	86.792	ENSPCIG00000006106	RBMS3	89	89.252	Phascolarctos_cinereus
ENSPKIG00000007989	-	100	85.932	ENSPFOG00000017887	rbms3	62	85.932	Poecilia_formosa
ENSPKIG00000007989	-	64	87.117	ENSPMEG00000012831	-	72	87.117	Poecilia_mexicana
ENSPKIG00000007989	-	100	92.248	ENSPMEG00000002993	-	62	92.248	Poecilia_mexicana
ENSPKIG00000007989	-	94	93.776	ENSPREG00000018221	-	92	93.776	Poecilia_reticulata
ENSPKIG00000007989	-	100	83.588	ENSPREG00000011880	rbms3	59	89.904	Poecilia_reticulata
ENSPKIG00000007989	-	100	72.727	ENSPCAG00000006307	RBMS3	60	72.727	Procavia_capensis
ENSPKIG00000007989	-	100	87.500	ENSPCOG00000017136	RBMS3	63	87.121	Propithecus_coquereli
ENSPKIG00000007989	-	84	90.000	ENSPVAG00000014037	RBMS3	60	72.727	Pteropus_vampyrus
ENSPKIG00000007989	-	100	92.636	ENSPNYG00000012624	-	62	92.636	Pundamilia_nyererei
ENSPKIG00000007989	-	100	85.283	ENSPNYG00000010546	rbms3	63	85.283	Pundamilia_nyererei
ENSPKIG00000007989	-	100	91.085	ENSPNAG00000001800	rbms3	62	91.085	Pygocentrus_nattereri
ENSPKIG00000007989	-	71	90.761	ENSPNAG00000026763	-	74	91.617	Pygocentrus_nattereri
ENSPKIG00000007989	-	100	88.031	ENSRNOG00000025881	Rbms3	65	88.031	Rattus_norvegicus
ENSPKIG00000007989	-	100	87.500	ENSRBIG00000035863	RBMS3	63	87.121	Rhinopithecus_bieti
ENSPKIG00000007989	-	81	91.388	ENSRROG00000027512	RBMS3	55	89.815	Rhinopithecus_roxellana
ENSPKIG00000007989	-	100	87.500	ENSSBOG00000020232	RBMS3	63	87.121	Saimiri_boliviensis_boliviensis
ENSPKIG00000007989	-	81	90.909	ENSSHAG00000002411	RBMS3	60	89.352	Sarcophilus_harrisii
ENSPKIG00000007989	-	100	93.798	ENSSFOG00015008578	rbms3	66	93.798	Scleropages_formosus
ENSPKIG00000007989	-	100	93.023	ENSSMAG00000020065	-	78	95.192	Scophthalmus_maximus
ENSPKIG00000007989	-	100	80.970	ENSSMAG00000004997	rbms3	69	80.970	Scophthalmus_maximus
ENSPKIG00000007989	-	100	84.644	ENSSDUG00000013656	RBMS3	58	89.904	Seriola_dumerili
ENSPKIG00000007989	-	100	92.636	ENSSDUG00000019287	-	62	92.636	Seriola_dumerili
ENSPKIG00000007989	-	100	84.074	ENSSLDG00000020276	RBMS3	63	84.074	Seriola_lalandi_dorsalis
ENSPKIG00000007989	-	100	92.636	ENSSLDG00000013224	-	62	92.636	Seriola_lalandi_dorsalis
ENSPKIG00000007989	-	81	90.909	ENSSARG00000000695	RBMS3	58	89.352	Sorex_araneus
ENSPKIG00000007989	-	100	92.636	ENSSPAG00000003983	-	62	92.636	Stegastes_partitus
ENSPKIG00000007989	-	100	84.701	ENSSPAG00000020693	rbms3	63	84.701	Stegastes_partitus
ENSPKIG00000007989	-	100	87.500	ENSSSCG00000036381	RBMS3	68	87.500	Sus_scrofa
ENSPKIG00000007989	-	100	75.676	ENSTRUG00000007482	-	60	77.220	Takifugu_rubripes
ENSPKIG00000007989	-	100	83.895	ENSTRUG00000021719	RBMS3	63	83.895	Takifugu_rubripes
ENSPKIG00000007989	-	81	91.388	ENSTBEG00000005362	RBMS3	58	89.815	Tupaia_belangeri
ENSPKIG00000007989	-	100	87.500	ENSTTRG00000006202	RBMS3	61	87.500	Tursiops_truncatus
ENSPKIG00000007989	-	100	87.500	ENSUMAG00000000263	RBMS3	66	87.500	Ursus_maritimus
ENSPKIG00000007989	-	81	74.641	ENSVPAG00000003842	RBMS3	52	73.148	Vicugna_pacos
ENSPKIG00000007989	-	81	91.388	ENSVVUG00000004660	RBMS3	93	89.352	Vulpes_vulpes
ENSPKIG00000007989	-	87	70.404	ENSXCOG00000019600	-	51	69.444	Xiphophorus_couchianus
ENSPKIG00000007989	-	100	82.955	ENSXMAG00000021783	rbms3	65	82.955	Xiphophorus_maculatus
ENSPKIG00000007989	-	100	92.636	ENSXMAG00000014382	-	62	92.636	Xiphophorus_maculatus