EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000008165 (Gene tree)
Gene ID: 111848411
Gene Symbol: bms1
Alias: -
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 9940 bases
Position: chrPGUA01000019.1:117936-127875
Accession: 111848411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000025257	AARP2CN	PF08142.12	2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000005986	-	4222	-	ENSPKIP00000025257	1312 (aa)	XP_023676140	UPI000CD5E3B9

Gene Model

Click here to download ENSPKIG00000008165's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008165	bms1	78	77.796	ENSAPOG00000002296	bms1	97	77.796	Acanthochromis_polyacanthus
ENSPKIG00000008165	bms1	86	75.517	ENSACIG00000002588	bms1	88	81.931	Amphilophus_citrinellus
ENSPKIG00000008165	bms1	88	77.047	ENSAOCG00000018088	bms1	96	77.760	Amphiprion_ocellaris
ENSPKIG00000008165	bms1	87	77.440	ENSAPEG00000014673	bms1	96	77.440	Amphiprion_percula
ENSPKIG00000008165	bms1	88	77.600	ENSATEG00000023465	bms1	87	81.481	Anabas_testudineus
ENSPKIG00000008165	bms1	90	77.476	ENSACLG00000001294	bms1	97	75.879	Astatotilapia_calliptera
ENSPKIG00000008165	bms1	81	80.778	ENSAMXG00000011236	bms1	50	76.115	Astyanax_mexicanus
ENSPKIG00000008165	bms1	78	52.854	WBGene00022021	Y61A9LA.10	93	55.858	Caenorhabditis_elegans
ENSPKIG00000008165	bms1	90	44.240	ENSCATG00000008695	-	70	55.408	Cercocebus_atys
ENSPKIG00000008165	bms1	80	62.376	ENSCING00000003181	-	96	62.376	Ciona_intestinalis
ENSPKIG00000008165	bms1	68	53.182	ENSCSAVG00000004113	-	84	57.821	Ciona_savignyi
ENSPKIG00000008165	bms1	87	73.927	ENSCSEG00000002469	bms1	85	80.645	Cynoglossus_semilaevis
ENSPKIG00000008165	bms1	85	77.920	ENSCVAG00000008371	bms1	97	77.866	Cyprinodon_variegatus
ENSPKIG00000008165	bms1	87	74.335	ENSDARG00000054154	bms1	96	75.079	Danio_rerio
ENSPKIG00000008165	bms1	83	58.867	FBgn0036686	CG7728	91	58.867	Drosophila_melanogaster
ENSPKIG00000008165	bms1	73	66.798	ENSETEG00000009554	BMS1	52	66.798	Echinops_telfairi
ENSPKIG00000008165	bms1	87	67.375	ENSEASG00005006894	BMS1	88	66.925	Equus_asinus_asinus
ENSPKIG00000008165	bms1	87	67.636	ENSECAG00000001358	BMS1	88	66.925	Equus_caballus
ENSPKIG00000008165	bms1	86	75.238	ENSELUG00000001756	bms1	93	75.159	Esox_lucius
ENSPKIG00000008165	bms1	86	77.849	ENSFHEG00000003367	bms1	97	77.636	Fundulus_heteroclitus
ENSPKIG00000008165	bms1	89	73.968	ENSGMOG00000000718	bms1	98	71.429	Gadus_morhua
ENSPKIG00000008165	bms1	91	74.326	ENSGACG00000015334	bms1	90	72.266	Gasterosteus_aculeatus
ENSPKIG00000008165	bms1	99	61.352	ENSGAGG00000003467	BMS1	50	67.680	Gopherus_agassizii
ENSPKIG00000008165	bms1	90	77.476	ENSHBUG00000022628	bms1	97	75.879	Haplochromis_burtoni
ENSPKIG00000008165	bms1	97	70.926	ENSHCOG00000017604	bms1	98	73.642	Hippocampus_comes
ENSPKIG00000008165	bms1	96	74.665	ENSIPUG00000017855	bms1	68	80.984	Ictalurus_punctatus
ENSPKIG00000008165	bms1	55	71.017	ENSKMAG00000021982	bms1	93	68.692	Kryptolebias_marmoratus
ENSPKIG00000008165	bms1	88	75.879	ENSLBEG00000028208	bms1	97	75.119	Labrus_bergylta
ENSPKIG00000008165	bms1	83	84.910	ENSLOCG00000012914	bms1	99	77.409	Lepisosteus_oculatus
ENSPKIG00000008165	bms1	79	67.510	ENSMFAG00000037771	BMS1	97	67.698	Macaca_fascicularis
ENSPKIG00000008165	bms1	68	55.611	ENSMLEG00000029084	-	78	53.590	Mandrillus_leucophaeus
ENSPKIG00000008165	bms1	90	74.771	ENSMAMG00000020855	bms1	97	76.997	Mastacembelus_armatus
ENSPKIG00000008165	bms1	90	77.476	ENSMZEG00005005663	bms1	97	75.879	Maylandia_zebra
ENSPKIG00000008165	bms1	84	75.000	ENSMMOG00000000977	bms1	97	72.756	Mola_mola
ENSPKIG00000008165	bms1	91	75.463	ENSMALG00000009680	bms1	97	75.801	Monopterus_albus
ENSPKIG00000008165	bms1	65	75.735	MGP_CAROLIEiJ_G0028785	-	76	75.243	Mus_caroli
ENSPKIG00000008165	bms1	88	67.994	ENSNGAG00000015258	Bms1	84	66.240	Nannospalax_galili
ENSPKIG00000008165	bms1	78	76.961	ENSOPRG00000005195	BMS1	67	76.456	Ochotona_princeps
ENSPKIG00000008165	bms1	88	77.352	ENSONIG00000007227	bms1	97	75.279	Oreochromis_niloticus
ENSPKIG00000008165	bms1	88	76.923	ENSORLG00000014655	bms1	97	75.279	Oryzias_latipes
ENSPKIG00000008165	bms1	88	75.835	ENSORLG00020016246	bms1	95	73.885	Oryzias_latipes_hni
ENSPKIG00000008165	bms1	88	75.676	ENSORLG00015014183	bms1	95	73.726	Oryzias_latipes_hsok
ENSPKIG00000008165	bms1	88	77.885	ENSOMEG00000015042	bms1	97	75.598	Oryzias_melastigma
ENSPKIG00000008165	bms1	86	67.836	ENSPEMG00000022467	Bms1	88	67.836	Peromyscus_maniculatus_bairdii
ENSPKIG00000008165	bms1	62	68.211	ENSPCIG00000001339	BMS1	80	68.850	Phascolarctos_cinereus
ENSPKIG00000008165	bms1	87	75.439	ENSPFOG00000015180	bms1	98	76.236	Poecilia_formosa
ENSPKIG00000008165	bms1	89	76.565	ENSPMEG00000023176	bms1	92	76.236	Poecilia_mexicana
ENSPKIG00000008165	bms1	70	70.548	ENSPCAG00000014528	BMS1	59	72.936	Procavia_capensis
ENSPKIG00000008165	bms1	91	73.244	ENSPNYG00000018866	bms1	95	75.318	Pundamilia_nyererei
ENSPKIG00000008165	bms1	72	49.199	YPL217C	-	78	49.038	Saccharomyces_cerevisiae
ENSPKIG00000008165	bms1	90	77.321	ENSSFOG00015022313	bms1	50	77.583	Scleropages_formosus
ENSPKIG00000008165	bms1	88	77.244	ENSSMAG00000019966	bms1	86	79.727	Scophthalmus_maximus
ENSPKIG00000008165	bms1	88	78.652	ENSSDUG00000016875	bms1	86	80.690	Seriola_dumerili
ENSPKIG00000008165	bms1	58	64.202	ENSSARG00000014407	BMS1	67	74.000	Sorex_araneus
ENSPKIG00000008165	bms1	86	70.288	ENSTRUG00000008028	bms1	95	69.808	Takifugu_rubripes
ENSPKIG00000008165	bms1	90	71.451	ENSTNIG00000006216	bms1	89	69.305	Tetraodon_nigroviridis
ENSPKIG00000008165	bms1	59	70.100	ENSTBEG00000001673	-	63	70.134	Tupaia_belangeri
ENSPKIG00000008165	bms1	63	69.620	ENSVPAG00000007477	BMS1	71	71.332	Vicugna_pacos
ENSPKIG00000008165	bms1	88	69.494	ENSXETG00000008158	bms1	91	68.045	Xenopus_tropicalis
ENSPKIG00000008165	bms1	87	75.000	ENSXCOG00000000506	bms1	96	80.392	Xiphophorus_couchianus
ENSPKIG00000008165	bms1	85	76.404	ENSXMAG00000014236	bms1	97	76.404	Xiphophorus_maculatus