EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000008209 (Gene tree)
Gene ID: 111844059
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6899 bases
Position: chrPGUA01000131.1:1490155-1497053
Accession: 111844059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000025301	RRM_1	PF00076.22	6.6e-16	1	1
ENSPKIP00000025279	RRM_1	PF00076.22	7.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000006031	-	813	-	ENSPKIP00000025301	270 (aa)	-	-
ENSPKIT00000006009	-	846	-	ENSPKIP00000025279	281 (aa)	XP_023667927	UPI000CD617AA

Gene Model

Click here to download ENSPKIG00000008209's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG
pki05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008209's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000008209	-	83	33.893	ENSPKIG00000018463	-	69	41.096

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008209	-	85	56.466	ENSANAG00000019399	SRSF7	84	74.783	Aotus_nancymaae
ENSPKIG00000008209	-	71	68.912	ENSAMXG00000001532	srsf7a	68	70.391	Astyanax_mexicanus
ENSPKIG00000008209	-	66	76.966	ENSAMXG00000031648	-	71	80.337	Astyanax_mexicanus
ENSPKIG00000008209	-	88	40.927	ENSCSAVG00000007369	-	68	53.782	Ciona_savignyi
ENSPKIG00000008209	-	86	64.567	ENSDARG00000035325	srsf7a	84	98.361	Danio_rerio
ENSPKIG00000008209	-	57	53.704	ENSEBUG00000002677	-	57	67.816	Eptatretus_burgeri
ENSPKIG00000008209	-	82	58.850	ENSELUG00000018155	srsf7b	83	73.043	Esox_lucius
ENSPKIG00000008209	-	72	62.755	ENSFHEG00000007159	srsf7a	86	66.667	Fundulus_heteroclitus
ENSPKIG00000008209	-	67	66.851	ENSIPUG00000007928	-	72	69.274	Ictalurus_punctatus
ENSPKIG00000008209	-	52	53.521	ENSJJAG00000020230	-	71	58.621	Jaculus_jaculus
ENSPKIG00000008209	-	64	47.093	ENSMAUG00000011430	-	57	58.140	Mesocricetus_auratus
ENSPKIG00000008209	-	69	48.691	ENSPMAG00000004472	srsf7a	56	68.182	Petromyzon_marinus
ENSPKIG00000008209	-	69	66.321	ENSPNAG00000000149	-	71	82.222	Pygocentrus_nattereri
ENSPKIG00000008209	-	91	83.268	ENSSFOG00015006796	-	96	80.816	Scleropages_formosus
ENSPKIG00000008209	-	83	57.269	ENSSDUG00000021338	srsf7b	80	73.043	Seriola_dumerili
ENSPKIG00000008209	-	52	67.606	ENSSPAG00000017204	srsf7b	82	75.652	Stegastes_partitus
ENSPKIG00000008209	-	56	50.649	ENSVVUG00000006092	-	75	60.759	Vulpes_vulpes