EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000008340 (Gene tree)
Gene ID
111832958
Gene Symbol
pabpn1l
Alias
-
Full Name
poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
6177 bases
Position
chrPGUA01000044.1:1359543-1365719
Accession
111832958
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000025478RRM_1PF00076.225.6e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000006214-3086-ENSPKIP00000025478202 (aa)XP_023646547UPI000CD637C4
Gene Model
Click here to download ENSPKIG00000008340's gene model file
Pathways
Pathway IDPathway NameSource
pki03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008340's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000008340pabpn1l8668.156ENSPKIG00000008144-5870.732
ENSPKIG00000008340pabpn1l9258.937ENSPKIG00000018052pabpn17169.880
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000008340pabpn1l9263.131ENSG00000100836PABPN110061.453Homo_sapiens
ENSPKIG00000008340pabpn1l8667.039ENSAPOG00000016425pabpn17169.512Acanthochromis_polyacanthus
ENSPKIG00000008340pabpn1l8863.684ENSAMEG00000007048BCL2L2-PABPN110063.158Ailuropoda_melanoleuca
ENSPKIG00000008340pabpn1l8665.746ENSACIG00000021744pabpn18070.922Amphilophus_citrinellus
ENSPKIG00000008340pabpn1l8468.023ENSAOCG00000015805pabpn17169.512Amphiprion_ocellaris
ENSPKIG00000008340pabpn1l8468.023ENSAPEG00000009623pabpn17169.512Amphiprion_percula
ENSPKIG00000008340pabpn1l8468.023ENSATEG00000020531pabpn17169.512Anabas_testudineus
ENSPKIG00000008340pabpn1l8863.684ENSACAG00000006185-5472.078Anolis_carolinensis
ENSPKIG00000008340pabpn1l9263.131ENSANAG00000024513-7163.131Aotus_nancymaae
ENSPKIG00000008340pabpn1l8665.385ENSACLG00000016374pabpn15669.325Astatotilapia_calliptera
ENSPKIG00000008340pabpn1l8667.222ENSAMXG00000000452pabpn18370.068Astyanax_mexicanus
ENSPKIG00000008340pabpn1l9163.978ENSBTAG00000050594-7063.830Bos_taurus
ENSPKIG00000008340pabpn1l9162.755ENSBTAG00000053753-7362.755Bos_taurus
ENSPKIG00000008340pabpn1l9263.131ENSBTAG00000006884PABPN16463.131Bos_taurus
ENSPKIG00000008340pabpn1l7549.032WBGene00003904pabp-28050.610Caenorhabditis_elegans
ENSPKIG00000008340pabpn1l7758.333ENSCJAG00000004407-8959.777Callithrix_jacchus
ENSPKIG00000008340pabpn1l9263.131ENSCJAG00000007960-7363.131Callithrix_jacchus
ENSPKIG00000008340pabpn1l9263.131ENSCAFG00000011482PABPN16463.131Canis_familiaris
ENSPKIG00000008340pabpn1l9263.131ENSCAFG00020006651-6463.131Canis_lupus_dingo
ENSPKIG00000008340pabpn1l9263.131ENSCAFG00020007298-6463.131Canis_lupus_dingo
ENSPKIG00000008340pabpn1l9263.131ENSCHIG00000012184PABPN16463.131Capra_hircus
ENSPKIG00000008340pabpn1l8863.874ENSTSYG00000033996BCL2L2-PABPN110061.453Carlito_syrichta
ENSPKIG00000008340pabpn1l6171.318ENSCAPG00000009461-7876.364Cavia_aperea
ENSPKIG00000008340pabpn1l9263.636ENSCPOG00000025574PABPN16463.636Cavia_porcellus
ENSPKIG00000008340pabpn1l9263.131ENSCCAG00000033954BCL2L2-PABPN17363.131Cebus_capucinus
ENSPKIG00000008340pabpn1l9263.131ENSCATG00000038536BCL2L2-PABPN17363.131Cercocebus_atys
ENSPKIG00000008340pabpn1l8750.472ENSCLAG00000012423PABPN15564.626Chinchilla_lanigera
ENSPKIG00000008340pabpn1l9261.616ENSCSAG00000016036PABPN16461.616Chlorocebus_sabaeus
ENSPKIG00000008340pabpn1l9057.436ENSCHOG00000004798BCL2L2-PABPN17560.452Choloepus_hoffmanni
ENSPKIG00000008340pabpn1l7760.479ENSCPBG00000026060-8071.329Chrysemys_picta_bellii
ENSPKIG00000008340pabpn1l9254.589ENSCING00000012468-8057.692Ciona_intestinalis
ENSPKIG00000008340pabpn1l8252.809ENSCSAVG00000002001-10054.118Ciona_savignyi
ENSPKIG00000008340pabpn1l8959.474ENSCANG00000030980-6856.842Colobus_angolensis_palliatus
ENSPKIG00000008340pabpn1l8863.874ENSCANG00000009750BCL2L2-PABPN110061.453Colobus_angolensis_palliatus
ENSPKIG00000008340pabpn1l9263.131ENSCGRG00001019696Pabpn110061.453Cricetulus_griseus_chok1gshd
ENSPKIG00000008340pabpn1l7073.427ENSCGRG00000011102Pabpn18973.427Cricetulus_griseus_crigri
ENSPKIG00000008340pabpn1l8667.598ENSCSEG00000008774pabpn17170.122Cynoglossus_semilaevis
ENSPKIG00000008340pabpn1l7471.812ENSCVAG00000003152pabpn16970.807Cyprinodon_variegatus
ENSPKIG00000008340pabpn1l8664.972ENSDARG00000087996pabpn1l8571.942Danio_rerio
ENSPKIG00000008340pabpn1l8668.156ENSDARG00000045373pabpn17570.732Danio_rerio
ENSPKIG00000008340pabpn1l9263.131ENSDNOG00000023682PABPN16463.131Dasypus_novemcinctus
ENSPKIG00000008340pabpn1l9263.636ENSDORG00000028966-5271.429Dipodomys_ordii
ENSPKIG00000008340pabpn1l6863.309ENSDORG00000023928-9763.309Dipodomys_ordii
ENSPKIG00000008340pabpn1l8954.497FBgn0005648Pabp26961.290Drosophila_melanogaster
ENSPKIG00000008340pabpn1l9062.694ENSEBUG00000002322pabpn17169.325Eptatretus_burgeri
ENSPKIG00000008340pabpn1l9263.131ENSEASG00005011716PABPN16463.131Equus_asinus_asinus
ENSPKIG00000008340pabpn1l8767.033ENSECAG00000011652PABPN15470.807Equus_caballus
ENSPKIG00000008340pabpn1l9261.111ENSEEUG00000012973-6759.091Erinaceus_europaeus
ENSPKIG00000008340pabpn1l8468.786ENSELUG00000022654pabpn17070.482Esox_lucius
ENSPKIG00000008340pabpn1l9263.131ENSFCAG00000031922PABPN16463.131Felis_catus
ENSPKIG00000008340pabpn1l7760.714ENSFDAG00000018381BCL2L2-PABPN17971.127Fukomys_damarensis
ENSPKIG00000008340pabpn1l9261.856ENSFHEG00000007215pabpn18457.561Fundulus_heteroclitus
ENSPKIG00000008340pabpn1l7472.483ENSGMOG00000003922pabpn15869.880Gadus_morhua
ENSPKIG00000008340pabpn1l7471.812ENSGAFG00000017099pabpn16970.807Gambusia_affinis
ENSPKIG00000008340pabpn1l7970.370ENSGACG00000002167pabpn16670.552Gasterosteus_aculeatus
ENSPKIG00000008340pabpn1l8755.801ENSGGOG00000025919-7361.654Gorilla_gorilla
ENSPKIG00000008340pabpn1l8958.947ENSGGOG00000039675-5566.013Gorilla_gorilla
ENSPKIG00000008340pabpn1l9263.131ENSGGOG00000022683-7363.131Gorilla_gorilla
ENSPKIG00000008340pabpn1l8467.442ENSHBUG00000019523pabpn16970.625Haplochromis_burtoni
ENSPKIG00000008340pabpn1l7751.875ENSHGLG00000009842-8060.714Heterocephalus_glaber_female
ENSPKIG00000008340pabpn1l9159.358ENSHGLG00000018588-5666.887Heterocephalus_glaber_female
ENSPKIG00000008340pabpn1l9263.636ENSHGLG00000002927-9372.297Heterocephalus_glaber_female
ENSPKIG00000008340pabpn1l8269.186ENSHGLG00100006673-9372.297Heterocephalus_glaber_male
ENSPKIG00000008340pabpn1l9159.358ENSHGLG00100015565-5766.887Heterocephalus_glaber_male
ENSPKIG00000008340pabpn1l7756.970ENSHGLG00100018935-10058.757Heterocephalus_glaber_male
ENSPKIG00000008340pabpn1l8468.023ENSHCOG00000004655pabpn17169.512Hippocampus_comes
ENSPKIG00000008340pabpn1l8469.186ENSIPUG00000008085PABPN17170.732Ictalurus_punctatus
ENSPKIG00000008340pabpn1l8469.364ENSIPUG00000000180-7271.779Ictalurus_punctatus
ENSPKIG00000008340pabpn1l7760.119ENSSTOG00000029847BCL2L2-PABPN110061.453Ictidomys_tridecemlineatus
ENSPKIG00000008340pabpn1l7760.119ENSJJAG00000023507Gm2052110061.453Jaculus_jaculus
ENSPKIG00000008340pabpn1l8867.778ENSKMAG00000018748pabpn17070.122Kryptolebias_marmoratus
ENSPKIG00000008340pabpn1l8667.039ENSLBEG00000027266pabpn17169.512Labrus_bergylta
ENSPKIG00000008340pabpn1l7868.519ENSLACG00000000646pabpn17068.519Latimeria_chalumnae
ENSPKIG00000008340pabpn1l10074.057ENSLOCG00000004694pabpn1l10073.113Lepisosteus_oculatus
ENSPKIG00000008340pabpn1l8667.222ENSLOCG00000000796pabpn15871.250Lepisosteus_oculatus
ENSPKIG00000008340pabpn1l6764.189ENSLAFG00000031227-7275.455Loxodonta_africana
ENSPKIG00000008340pabpn1l6559.155ENSMFAG00000031355-6773.958Macaca_fascicularis
ENSPKIG00000008340pabpn1l8863.874ENSMFAG00000032183BCL2L2-PABPN110061.453Macaca_fascicularis
ENSPKIG00000008340pabpn1l8957.360ENSMMUG00000048382-5361.176Macaca_mulatta
ENSPKIG00000008340pabpn1l8863.874ENSMMUG00000014747BCL2L2-PABPN17575.455Macaca_mulatta
ENSPKIG00000008340pabpn1l7756.970ENSMNEG00000035750-6773.958Macaca_nemestrina
ENSPKIG00000008340pabpn1l9263.131ENSMNEG00000045065BCL2L2-PABPN17363.131Macaca_nemestrina
ENSPKIG00000008340pabpn1l7757.407ENSMLEG00000034623-9959.420Mandrillus_leucophaeus
ENSPKIG00000008340pabpn1l8863.874ENSMLEG00000043862BCL2L2-PABPN110061.453Mandrillus_leucophaeus
ENSPKIG00000008340pabpn1l8667.039ENSMAMG00000007979pabpn15869.512Mastacembelus_armatus
ENSPKIG00000008340pabpn1l8666.480ENSMZEG00005011904pabpn15670.625Maylandia_zebra
ENSPKIG00000008340pabpn1l9263.131ENSMAUG00000007383Gm205216663.131Mesocricetus_auratus
ENSPKIG00000008340pabpn1l9263.131ENSMICG00000010002BCL2L2-PABPN17363.131Microcebus_murinus
ENSPKIG00000008340pabpn1l9263.317ENSMOCG00000018557Gm205219071.622Microtus_ochrogaster
ENSPKIG00000008340pabpn1l8667.039ENSMMOG00000005405pabpn17169.512Mola_mola
ENSPKIG00000008340pabpn1l7971.429ENSMODG00000004535-5371.429Monodelphis_domestica
ENSPKIG00000008340pabpn1l8667.039ENSMALG00000019612pabpn15869.512Monopterus_albus
ENSPKIG00000008340pabpn1l8862.963MGP_CAROLIEiJ_G0019276Gm205215861.340Mus_caroli
ENSPKIG00000008340pabpn1l9262.437MGP_CAROLIEiJ_G0019277Pabpn19072.297Mus_caroli
ENSPKIG00000008340pabpn1l8862.434ENSMUSG00000092232Gm205215861.340Mus_musculus
ENSPKIG00000008340pabpn1l9261.929ENSMUSG00000022194Pabpn19072.297Mus_musculus
ENSPKIG00000008340pabpn1l8862.434MGP_PahariEiJ_G0030294Gm205215861.340Mus_pahari
ENSPKIG00000008340pabpn1l9261.929MGP_PahariEiJ_G0030295Pabpn110073.810Mus_pahari
ENSPKIG00000008340pabpn1l9261.929MGP_SPRETEiJ_G0020166Pabpn19072.297Mus_spretus
ENSPKIG00000008340pabpn1l8862.434MGP_SPRETEiJ_G0020165Gm205215861.340Mus_spretus
ENSPKIG00000008340pabpn1l7264.474ENSMPUG00000006775-8470.423Mustela_putorius_furo
ENSPKIG00000008340pabpn1l8567.045ENSMLUG00000012452-6561.500Myotis_lucifugus
ENSPKIG00000008340pabpn1l9260.914ENSMLUG00000028677-7261.421Myotis_lucifugus
ENSPKIG00000008340pabpn1l8862.632ENSMLUG00000003800-8070.588Myotis_lucifugus
ENSPKIG00000008340pabpn1l8666.480ENSNBRG00000023955pabpn18070.922Neolamprologus_brichardi
ENSPKIG00000008340pabpn1l6652.593ENSNLEG00000035292-9552.593Nomascus_leucogenys
ENSPKIG00000008340pabpn1l9263.131ENSNLEG00000015007-7063.131Nomascus_leucogenys
ENSPKIG00000008340pabpn1l9159.140ENSNLEG00000030598-7258.602Nomascus_leucogenys
ENSPKIG00000008340pabpn1l8256.180ENSODEG00000011555-9555.618Octodon_degus
ENSPKIG00000008340pabpn1l9263.636ENSODEG00000002083BCL2L2-PABPN16463.636Octodon_degus
ENSPKIG00000008340pabpn1l9262.234ENSODEG00000003739-6661.290Octodon_degus
ENSPKIG00000008340pabpn1l8666.480ENSONIG00000008112pabpn15670.625Oreochromis_niloticus
ENSPKIG00000008340pabpn1l6763.699ENSOANG00000009218-7575.676Ornithorhynchus_anatinus
ENSPKIG00000008340pabpn1l9263.636ENSOCUG00000016174PABPN17263.636Oryctolagus_cuniculus
ENSPKIG00000008340pabpn1l8667.039ENSORLG00000027900pabpn17069.512Oryzias_latipes
ENSPKIG00000008340pabpn1l8468.023ENSORLG00020004681pabpn15669.512Oryzias_latipes_hni
ENSPKIG00000008340pabpn1l8468.023ENSORLG00015000018pabpn17169.512Oryzias_latipes_hsok
ENSPKIG00000008340pabpn1l8667.039ENSOMEG00000016618pabpn16169.512Oryzias_melastigma
ENSPKIG00000008340pabpn1l9263.131ENSOGAG00000008710PABPN16463.131Otolemur_garnettii
ENSPKIG00000008340pabpn1l8863.874ENSPPAG00000028984BCL2L2-PABPN18470.423Pan_paniscus
ENSPKIG00000008340pabpn1l7751.515ENSPPAG00000039421-7163.846Pan_paniscus
ENSPKIG00000008340pabpn1l9263.131ENSPPRG00000010567PABPN16463.131Panthera_pardus
ENSPKIG00000008340pabpn1l7760.119ENSPTIG00000001063BCL2L2-PABPN110061.453Panthera_tigris_altaica
ENSPKIG00000008340pabpn1l9263.131ENSPTRG00000006167BCL2L27363.131Pan_troglodytes
ENSPKIG00000008340pabpn1l8955.556ENSPTRG00000047273-5165.035Pan_troglodytes
ENSPKIG00000008340pabpn1l9263.131ENSPANG00000021100BCL2L2-PABPN17363.131Papio_anubis
ENSPKIG00000008340pabpn1l8957.868ENSPANG00000023326-6773.958Papio_anubis
ENSPKIG00000008340pabpn1l5570.270ENSPSIG00000011959-8070.270Pelodiscus_sinensis
ENSPKIG00000008340pabpn1l8667.598ENSPMGG00000022027pabpn16070.122Periophthalmus_magnuspinnatus
ENSPKIG00000008340pabpn1l9263.131ENSPEMG00000008332Gm205218773.427Peromyscus_maniculatus_bairdii
ENSPKIG00000008340pabpn1l7371.622ENSPMAG00000006212pabpn16969.512Petromyzon_marinus
ENSPKIG00000008340pabpn1l9262.626ENSPCIG00000027751-6462.944Phascolarctos_cinereus
ENSPKIG00000008340pabpn1l7471.812ENSPFOG00000010351pabpn16870.807Poecilia_formosa
ENSPKIG00000008340pabpn1l7471.812ENSPLAG00000022696pabpn15670.807Poecilia_latipinna
ENSPKIG00000008340pabpn1l7471.812ENSPMEG00000020856pabpn16970.807Poecilia_mexicana
ENSPKIG00000008340pabpn1l7471.812ENSPREG00000011278pabpn16970.807Poecilia_reticulata
ENSPKIG00000008340pabpn1l8667.598ENSPPYG00000005663PABPN15770.807Pongo_abelii
ENSPKIG00000008340pabpn1l8757.609ENSPCAG00000005902PABPN15560.123Procavia_capensis
ENSPKIG00000008340pabpn1l9263.131ENSPCOG00000028047BCL2L2-PABPN17363.131Propithecus_coquereli
ENSPKIG00000008340pabpn1l9262.437ENSPVAG00000005270PABPN15468.235Pteropus_vampyrus
ENSPKIG00000008340pabpn1l8467.442ENSPNYG00000013182pabpn16970.625Pundamilia_nyererei
ENSPKIG00000008340pabpn1l8667.598ENSPNAG00000023526pabpn17170.122Pygocentrus_nattereri
ENSPKIG00000008340pabpn1l9279.894ENSPNAG00000021666pabpn1l9378.836Pygocentrus_nattereri
ENSPKIG00000008340pabpn1l9261.929ENSRNOG00000042195Pabpn16563.131Rattus_norvegicus
ENSPKIG00000008340pabpn1l8960.000ENSRBIG00000039547-5565.359Rhinopithecus_bieti
ENSPKIG00000008340pabpn1l9258.333ENSRBIG00000042811-8158.763Rhinopithecus_bieti
ENSPKIG00000008340pabpn1l8955.263ENSRROG00000036409-5856.021Rhinopithecus_roxellana
ENSPKIG00000008340pabpn1l8268.605ENSRROG00000045535BCL2L2-PABPN110061.453Rhinopithecus_roxellana
ENSPKIG00000008340pabpn1l8960.000ENSRROG00000040409-6258.421Rhinopithecus_roxellana
ENSPKIG00000008340pabpn1l8859.804ENSSBOG00000026930BCL2L2-PABPN18470.423Saimiri_boliviensis_boliviensis
ENSPKIG00000008340pabpn1l8863.158ENSSHAG00000014841-8762.963Sarcophilus_harrisii
ENSPKIG00000008340pabpn1l8758.470ENSSHAG00000007707-6860.870Sarcophilus_harrisii
ENSPKIG00000008340pabpn1l8668.156ENSSFOG00015012565pabpn17470.122Scleropages_formosus
ENSPKIG00000008340pabpn1l8469.767ENSSFOG00015014718pabpn17171.341Scleropages_formosus
ENSPKIG00000008340pabpn1l9483.158ENSSFOG00015015833pabpn1l7789.697Scleropages_formosus
ENSPKIG00000008340pabpn1l8667.039ENSSMAG00000020157pabpn17169.512Scophthalmus_maximus
ENSPKIG00000008340pabpn1l8667.039ENSSDUG00000020582pabpn15869.512Seriola_dumerili
ENSPKIG00000008340pabpn1l8468.023ENSSLDG00000007118pabpn17169.512Seriola_lalandi_dorsalis
ENSPKIG00000008340pabpn1l7761.078ENSSPUG00000018308-8071.329Sphenodon_punctatus
ENSPKIG00000008340pabpn1l8666.298ENSSPAG00000021658pabpn16870.625Stegastes_partitus
ENSPKIG00000008340pabpn1l9253.514ENSSSCG00000034805-6160.667Sus_scrofa
ENSPKIG00000008340pabpn1l9263.131ENSSSCG00000002023PABPN16463.131Sus_scrofa
ENSPKIG00000008340pabpn1l5253.271ENSSSCG00000038472-7553.271Sus_scrofa
ENSPKIG00000008340pabpn1l8667.039ENSTRUG00000023664pabpn17169.512Takifugu_rubripes
ENSPKIG00000008340pabpn1l8667.039ENSTNIG00000005369pabpn17669.512Tetraodon_nigroviridis
ENSPKIG00000008340pabpn1l9263.131ENSUAMG00000024460PABPN16463.131Ursus_americanus
ENSPKIG00000008340pabpn1l8863.874ENSVVUG00000019912BCL2L2-PABPN17463.158Vulpes_vulpes
ENSPKIG00000008340pabpn1l7372.000ENSXETG00000014597pabpn15570.732Xenopus_tropicalis
ENSPKIG00000008340pabpn1l5078.000ENSXCOG00000005158pabpn16675.893Xiphophorus_couchianus
ENSPKIG00000008340pabpn1l7471.812ENSXMAG00000006196pabpn16970.807Xiphophorus_maculatus

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