EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000008443 (Gene tree)
Gene ID: 111860861
Gene Symbol: dkc1
Alias: -
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 7040 bases
Position: chrPGUA01000042.1:1932358-1939397
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000025708	TruB_N	PF01509.18	4e-22	1	1
ENSPKIP00000025677	TruB_N	PF01509.18	8.4e-22	1	1
ENSPKIP00000025677	PUA	PF01472.20	4.3e-18	1	1
ENSPKIP00000025708	PUA	PF01472.20	4.8e-18	1	1
ENSPKIP00000025708	DKCLD	PF08068.12	4.3e-31	1	1
ENSPKIP00000025677	DKCLD	PF08068.12	6.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000006414	-	1736	-	ENSPKIP00000025677	565 (aa)	-	-
ENSPKIT00000006449	-	1422	-	ENSPKIP00000025708	473 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000008443's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008443	dkc1	91	81.050	ENSG00000130826	DKC1	99	89.320	Homo_sapiens
ENSPKIG00000008443	dkc1	91	87.269	ENSAPOG00000007799	dkc1	84	88.372	Acanthochromis_polyacanthus
ENSPKIG00000008443	dkc1	84	87.848	ENSAMEG00000002776	DKC1	85	83.217	Ailuropoda_melanoleuca
ENSPKIG00000008443	dkc1	91	86.343	ENSACIG00000022614	dkc1	86	86.744	Amphilophus_citrinellus
ENSPKIG00000008443	dkc1	91	87.935	ENSAOCG00000013159	dkc1	87	87.529	Amphiprion_ocellaris
ENSPKIG00000008443	dkc1	91	87.935	ENSAPEG00000002284	dkc1	87	87.529	Amphiprion_percula
ENSPKIG00000008443	dkc1	92	84.876	ENSATEG00000013682	dkc1	86	84.876	Anabas_testudineus
ENSPKIG00000008443	dkc1	92	82.339	ENSACAG00000015600	DKC1	75	83.678	Anolis_carolinensis
ENSPKIG00000008443	dkc1	99	77.447	ENSANAG00000022732	DKC1	77	88.579	Aotus_nancymaae
ENSPKIG00000008443	dkc1	84	91.688	ENSACLG00000015605	dkc1	81	91.688	Astatotilapia_calliptera
ENSPKIG00000008443	dkc1	92	88.532	ENSAMXG00000017108	dkc1	85	88.356	Astyanax_mexicanus
ENSPKIG00000008443	dkc1	90	80.822	ENSBTAG00000013045	DKC1	85	83.450	Bos_taurus
ENSPKIG00000008443	dkc1	83	65.903	WBGene00010478	K01G5.5	96	63.529	Caenorhabditis_elegans
ENSPKIG00000008443	dkc1	99	76.809	ENSCJAG00000004210	DKC1	85	81.735	Callithrix_jacchus
ENSPKIG00000008443	dkc1	95	78.681	ENSCAFG00000019620	-	88	79.341	Canis_familiaris
ENSPKIG00000008443	dkc1	84	77.215	ENSCAFG00000009311	-	88	70.199	Canis_familiaris
ENSPKIG00000008443	dkc1	84	76.456	ENSCAFG00020009379	-	75	76.456	Canis_lupus_dingo
ENSPKIG00000008443	dkc1	95	78.681	ENSCAFG00020008918	-	88	79.341	Canis_lupus_dingo
ENSPKIG00000008443	dkc1	90	80.594	ENSCHIG00000017392	DKC1	92	75.934	Capra_hircus
ENSPKIG00000008443	dkc1	99	77.660	ENSTSYG00000007681	DKC1	85	80.493	Carlito_syrichta
ENSPKIG00000008443	dkc1	77	89.503	ENSCAPG00000003342	DKC1	83	89.532	Cavia_aperea
ENSPKIG00000008443	dkc1	91	80.822	ENSCPOG00000008825	DKC1	85	82.339	Cavia_porcellus
ENSPKIG00000008443	dkc1	90	71.724	ENSCCAG00000027418	DKC1	83	72.517	Cebus_capucinus
ENSPKIG00000008443	dkc1	91	80.594	ENSCATG00000033602	DKC1	85	81.422	Cercocebus_atys
ENSPKIG00000008443	dkc1	89	82.831	ENSCLAG00000000720	DKC1	85	84.149	Chinchilla_lanigera
ENSPKIG00000008443	dkc1	91	80.594	ENSCSAG00000006706	DKC1	85	81.422	Chlorocebus_sabaeus
ENSPKIG00000008443	dkc1	83	87.817	ENSCPBG00000005858	DKC1	88	84.951	Chrysemys_picta_bellii
ENSPKIG00000008443	dkc1	84	79.198	ENSCING00000004599	-	77	80.303	Ciona_intestinalis
ENSPKIG00000008443	dkc1	85	78.803	ENSCSAVG00000010047	-	93	76.329	Ciona_savignyi
ENSPKIG00000008443	dkc1	91	80.594	ENSCANG00000027987	DKC1	85	81.422	Colobus_angolensis_palliatus
ENSPKIG00000008443	dkc1	92	80.499	ENSCGRG00001014574	-	85	80.499	Cricetulus_griseus_chok1gshd
ENSPKIG00000008443	dkc1	78	68.022	ENSCGRG00001016789	-	79	68.022	Cricetulus_griseus_chok1gshd
ENSPKIG00000008443	dkc1	92	80.499	ENSCGRG00000016075	-	85	80.499	Cricetulus_griseus_crigri
ENSPKIG00000008443	dkc1	78	68.022	ENSCGRG00000014809	-	77	68.120	Cricetulus_griseus_crigri
ENSPKIG00000008443	dkc1	99	81.474	ENSCSEG00000012633	dkc1	97	81.659	Cynoglossus_semilaevis
ENSPKIG00000008443	dkc1	92	85.714	ENSCVAG00000010155	dkc1	84	86.175	Cyprinodon_variegatus
ENSPKIG00000008443	dkc1	84	94.177	ENSDARG00000016484	dkc1	84	89.720	Danio_rerio
ENSPKIG00000008443	dkc1	98	78.664	ENSDNOG00000004218	DKC1	84	82.599	Dasypus_novemcinctus
ENSPKIG00000008443	dkc1	58	73.551	ENSDORG00000013566	-	91	73.551	Dipodomys_ordii
ENSPKIG00000008443	dkc1	84	74.177	FBgn0259937	Nop60B	88	69.000	Drosophila_melanogaster
ENSPKIG00000008443	dkc1	84	86.835	ENSETEG00000016095	DKC1	80	87.023	Echinops_telfairi
ENSPKIG00000008443	dkc1	68	81.931	ENSEBUG00000015962	dkc1	99	83.276	Eptatretus_burgeri
ENSPKIG00000008443	dkc1	98	77.586	ENSEASG00005007484	DKC1	76	87.563	Equus_asinus_asinus
ENSPKIG00000008443	dkc1	98	77.586	ENSECAG00000023524	DKC1	76	87.563	Equus_caballus
ENSPKIG00000008443	dkc1	82	88.083	ENSEEUG00000003323	DKC1	99	82.938	Erinaceus_europaeus
ENSPKIG00000008443	dkc1	99	82.729	ENSELUG00000014538	dkc1	86	88.525	Esox_lucius
ENSPKIG00000008443	dkc1	84	87.595	ENSFCAG00000006577	DKC1	86	81.651	Felis_catus
ENSPKIG00000008443	dkc1	84	89.303	ENSFALG00000011496	DKC1	85	83.784	Ficedula_albicollis
ENSPKIG00000008443	dkc1	89	84.309	ENSFDAG00000002516	DKC1	85	84.309	Fukomys_damarensis
ENSPKIG00000008443	dkc1	91	85.450	ENSFHEG00000004627	dkc1	85	86.279	Fundulus_heteroclitus
ENSPKIG00000008443	dkc1	82	89.231	ENSGMOG00000017277	dkc1	99	89.231	Gadus_morhua
ENSPKIG00000008443	dkc1	84	90.657	ENSGALG00000005054	DKC1	85	84.703	Gallus_gallus
ENSPKIG00000008443	dkc1	92	86.239	ENSGAFG00000011486	dkc1	74	86.636	Gambusia_affinis
ENSPKIG00000008443	dkc1	84	92.405	ENSGACG00000004373	dkc1	96	93.617	Gasterosteus_aculeatus
ENSPKIG00000008443	dkc1	94	80.493	ENSGAGG00000011330	DKC1	84	83.180	Gopherus_agassizii
ENSPKIG00000008443	dkc1	91	81.050	ENSGGOG00000001045	DKC1	85	81.881	Gorilla_gorilla
ENSPKIG00000008443	dkc1	98	82.581	ENSHBUG00000012436	dkc1	90	85.558	Haplochromis_burtoni
ENSPKIG00000008443	dkc1	91	79.638	ENSHGLG00000000649	DKC1	85	80.455	Heterocephalus_glaber_female
ENSPKIG00000008443	dkc1	91	79.638	ENSHGLG00100001153	DKC1	86	80.682	Heterocephalus_glaber_male
ENSPKIG00000008443	dkc1	90	86.085	ENSHCOG00000021099	dkc1	84	86.321	Hippocampus_comes
ENSPKIG00000008443	dkc1	90	87.617	ENSIPUG00000010309	dkc1	85	86.136	Ictalurus_punctatus
ENSPKIG00000008443	dkc1	99	70.426	ENSSTOG00000020149	-	84	75.467	Ictidomys_tridecemlineatus
ENSPKIG00000008443	dkc1	91	80.638	ENSSTOG00000001074	-	90	81.321	Ictidomys_tridecemlineatus
ENSPKIG00000008443	dkc1	99	67.234	ENSSTOG00000011904	-	81	70.320	Ictidomys_tridecemlineatus
ENSPKIG00000008443	dkc1	58	74.275	ENSJJAG00000010086	-	91	74.275	Jaculus_jaculus
ENSPKIG00000008443	dkc1	91	84.722	ENSKMAG00000008010	dkc1	86	84.722	Kryptolebias_marmoratus
ENSPKIG00000008443	dkc1	91	86.079	ENSLBEG00000019122	dkc1	92	86.504	Labrus_bergylta
ENSPKIG00000008443	dkc1	84	88.608	ENSLACG00000014025	DKC1	90	88.804	Latimeria_chalumnae
ENSPKIG00000008443	dkc1	93	87.045	ENSLOCG00000013713	dkc1	90	88.453	Lepisosteus_oculatus
ENSPKIG00000008443	dkc1	90	81.422	ENSLAFG00000000221	DKC1	84	83.180	Loxodonta_africana
ENSPKIG00000008443	dkc1	91	80.594	ENSMFAG00000032398	DKC1	73	81.422	Macaca_fascicularis
ENSPKIG00000008443	dkc1	91	80.594	ENSMMUG00000005768	DKC1	85	81.422	Macaca_mulatta
ENSPKIG00000008443	dkc1	91	80.594	ENSMNEG00000034503	DKC1	85	81.422	Macaca_nemestrina
ENSPKIG00000008443	dkc1	91	80.594	ENSMLEG00000034422	DKC1	85	81.422	Mandrillus_leucophaeus
ENSPKIG00000008443	dkc1	84	93.955	ENSMAMG00000005427	dkc1	95	88.290	Mastacembelus_armatus
ENSPKIG00000008443	dkc1	98	82.796	ENSMZEG00005014503	dkc1	90	85.777	Maylandia_zebra
ENSPKIG00000008443	dkc1	77	91.460	ENSMGAG00000009238	DKC1	87	85.644	Meleagris_gallopavo
ENSPKIG00000008443	dkc1	58	72.826	ENSMAUG00000016454	-	91	72.826	Mesocricetus_auratus
ENSPKIG00000008443	dkc1	84	72.727	ENSMICG00000002818	-	99	76.438	Microcebus_murinus
ENSPKIG00000008443	dkc1	84	87.089	ENSMICG00000038751	-	79	87.310	Microcebus_murinus
ENSPKIG00000008443	dkc1	58	70.652	ENSMOCG00000001169	-	91	70.652	Microtus_ochrogaster
ENSPKIG00000008443	dkc1	84	91.960	ENSMMOG00000020348	dkc1	87	91.960	Mola_mola
ENSPKIG00000008443	dkc1	89	81.149	ENSMODG00000009243	DKC1	74	83.059	Monodelphis_domestica
ENSPKIG00000008443	dkc1	90	87.264	ENSMALG00000009454	dkc1	83	88.180	Monopterus_albus
ENSPKIG00000008443	dkc1	84	74.938	MGP_CAROLIEiJ_G0033191	Dkc1	85	83.200	Mus_caroli
ENSPKIG00000008443	dkc1	90	80.920	ENSMUSG00000031403	Dkc1	93	75.362	Mus_musculus
ENSPKIG00000008443	dkc1	90	80.963	MGP_PahariEiJ_G0031735	Dkc1	85	82.258	Mus_pahari
ENSPKIG00000008443	dkc1	90	80.920	MGP_SPRETEiJ_G0034351	Dkc1	85	82.217	Mus_spretus
ENSPKIG00000008443	dkc1	98	77.371	ENSMPUG00000016136	DKC1	73	87.817	Mustela_putorius_furo
ENSPKIG00000008443	dkc1	91	77.878	ENSMLUG00000011918	DKC1	84	78.912	Myotis_lucifugus
ENSPKIG00000008443	dkc1	58	73.551	ENSNGAG00000015724	-	91	73.551	Nannospalax_galili
ENSPKIG00000008443	dkc1	84	92.191	ENSNBRG00000005638	dkc1	80	92.191	Neolamprologus_brichardi
ENSPKIG00000008443	dkc1	91	80.822	ENSNLEG00000014323	DKC1	85	81.651	Nomascus_leucogenys
ENSPKIG00000008443	dkc1	84	83.291	ENSMEUG00000001066	DKC1	89	82.310	Notamacropus_eugenii
ENSPKIG00000008443	dkc1	73	80.980	ENSOPRG00000005248	DKC1	69	81.449	Ochotona_princeps
ENSPKIG00000008443	dkc1	86	86.275	ENSODEG00000011816	-	86	81.963	Octodon_degus
ENSPKIG00000008443	dkc1	58	73.551	ENSODEG00000000549	-	91	73.551	Octodon_degus
ENSPKIG00000008443	dkc1	98	83.656	ENSONIG00000013889	dkc1	84	88.498	Oreochromis_niloticus
ENSPKIG00000008443	dkc1	89	83.645	ENSOANG00000008713	-	89	84.101	Ornithorhynchus_anatinus
ENSPKIG00000008443	dkc1	51	63.487	ENSOANG00000022295	-	86	63.192	Ornithorhynchus_anatinus
ENSPKIG00000008443	dkc1	91	80.594	ENSOCUG00000012646	DKC1	85	81.881	Oryctolagus_cuniculus
ENSPKIG00000008443	dkc1	90	87.383	ENSORLG00000018748	dkc1	85	86.406	Oryzias_latipes
ENSPKIG00000008443	dkc1	92	84.758	ENSOMEG00000005786	dkc1	82	89.916	Oryzias_melastigma
ENSPKIG00000008443	dkc1	86	85.294	ENSOGAG00000003399	DKC1	85	80.587	Otolemur_garnettii
ENSPKIG00000008443	dkc1	90	82.448	ENSOARG00000003047	DKC1	86	82.448	Ovis_aries
ENSPKIG00000008443	dkc1	86	85.539	ENSPPAG00000023820	DKC1	85	81.881	Pan_paniscus
ENSPKIG00000008443	dkc1	84	87.595	ENSPPRG00000009104	DKC1	86	81.651	Panthera_pardus
ENSPKIG00000008443	dkc1	90	82.944	ENSPTIG00000017469	DKC1	85	83.568	Panthera_tigris_altaica
ENSPKIG00000008443	dkc1	91	81.050	ENSPTRG00000022449	DKC1	85	81.881	Pan_troglodytes
ENSPKIG00000008443	dkc1	91	81.050	ENSPTRG00000043416	-	81	77.917	Pan_troglodytes
ENSPKIG00000008443	dkc1	91	80.594	ENSPANG00000011978	DKC1	85	81.422	Papio_anubis
ENSPKIG00000008443	dkc1	75	90.476	ENSPSIG00000013765	DKC1	86	90.476	Pelodiscus_sinensis
ENSPKIG00000008443	dkc1	92	79.556	ENSPMGG00000004097	dkc1	83	79.778	Periophthalmus_magnuspinnatus
ENSPKIG00000008443	dkc1	66	85.380	ENSPEMG00000013348	Dkc1	82	85.380	Peromyscus_maniculatus_bairdii
ENSPKIG00000008443	dkc1	84	87.342	ENSPCIG00000016706	DKC1	72	83.217	Phascolarctos_cinereus
ENSPKIG00000008443	dkc1	92	86.239	ENSPFOG00000018653	dkc1	86	86.636	Poecilia_formosa
ENSPKIG00000008443	dkc1	92	86.239	ENSPLAG00000003272	dkc1	78	86.636	Poecilia_latipinna
ENSPKIG00000008443	dkc1	92	86.239	ENSPMEG00000010413	dkc1	86	86.636	Poecilia_mexicana
ENSPKIG00000008443	dkc1	92	86.927	ENSPREG00000004100	dkc1	85	86.927	Poecilia_reticulata
ENSPKIG00000008443	dkc1	91	81.050	ENSPPYG00000020892	DKC1	86	81.881	Pongo_abelii
ENSPKIG00000008443	dkc1	77	88.674	ENSPCAG00000015034	DKC1	73	87.166	Procavia_capensis
ENSPKIG00000008443	dkc1	91	80.594	ENSPCOG00000026874	DKC1	85	81.881	Propithecus_coquereli
ENSPKIG00000008443	dkc1	84	87.089	ENSPVAG00000009222	DKC1	85	82.599	Pteropus_vampyrus
ENSPKIG00000008443	dkc1	99	81.381	ENSPNYG00000020063	dkc1	88	84.910	Pundamilia_nyererei
ENSPKIG00000008443	dkc1	93	86.621	ENSPNAG00000005780	dkc1	86	86.621	Pygocentrus_nattereri
ENSPKIG00000008443	dkc1	83	84.051	ENSRNOG00000055562	Dkc1	85	78.851	Rattus_norvegicus
ENSPKIG00000008443	dkc1	91	80.594	ENSRBIG00000028457	DKC1	73	81.422	Rhinopithecus_bieti
ENSPKIG00000008443	dkc1	91	80.594	ENSRROG00000044780	DKC1	85	81.422	Rhinopithecus_roxellana
ENSPKIG00000008443	dkc1	81	72.063	YLR175W	-	90	65.287	Saccharomyces_cerevisiae
ENSPKIG00000008443	dkc1	98	77.586	ENSSBOG00000033746	DKC1	93	75.975	Saimiri_boliviensis_boliviensis
ENSPKIG00000008443	dkc1	89	82.670	ENSSHAG00000002463	DKC1	89	83.886	Sarcophilus_harrisii
ENSPKIG00000008443	dkc1	92	86.560	ENSSFOG00015009585	dkc1	86	87.528	Scleropages_formosus
ENSPKIG00000008443	dkc1	92	86.143	ENSSMAG00000002552	dkc1	85	87.886	Scophthalmus_maximus
ENSPKIG00000008443	dkc1	91	86.713	ENSSDUG00000009963	dkc1	89	85.590	Seriola_dumerili
ENSPKIG00000008443	dkc1	83	92.386	ENSSLDG00000019342	dkc1	83	92.424	Seriola_lalandi_dorsalis
ENSPKIG00000008443	dkc1	84	83.291	ENSSARG00000001822	DKC1	79	83.503	Sorex_araneus
ENSPKIG00000008443	dkc1	90	82.710	ENSSPUG00000018907	DKC1	83	81.093	Sphenodon_punctatus
ENSPKIG00000008443	dkc1	99	82.600	ENSSPAG00000002585	dkc1	81	87.269	Stegastes_partitus
ENSPKIG00000008443	dkc1	84	87.089	ENSSSCG00000012823	DKC1	90	81.422	Sus_scrofa
ENSPKIG00000008443	dkc1	77	92.562	ENSTGUG00000006781	DKC1	88	86.935	Taeniopygia_guttata
ENSPKIG00000008443	dkc1	92	85.092	ENSTRUG00000004413	dkc1	87	85.550	Takifugu_rubripes
ENSPKIG00000008443	dkc1	91	69.161	ENSTNIG00000002582	dkc1	86	69.545	Tetraodon_nigroviridis
ENSPKIG00000008443	dkc1	68	76.636	ENSTBEG00000011262	DKC1	86	79.872	Tupaia_belangeri
ENSPKIG00000008443	dkc1	58	88.406	ENSTTRG00000008089	DKC1	55	88.406	Tursiops_truncatus
ENSPKIG00000008443	dkc1	84	87.595	ENSUAMG00000022721	DKC1	83	88.071	Ursus_americanus
ENSPKIG00000008443	dkc1	90	81.293	ENSUMAG00000016899	DKC1	94	88.052	Ursus_maritimus
ENSPKIG00000008443	dkc1	84	71.646	ENSVVUG00000021671	-	73	71.827	Vulpes_vulpes
ENSPKIG00000008443	dkc1	96	77.273	ENSVVUG00000020734	-	69	86.035	Vulpes_vulpes
ENSPKIG00000008443	dkc1	95	82.183	ENSXETG00000032517	DKC1	85	84.455	Xenopus_tropicalis
ENSPKIG00000008443	dkc1	92	86.468	ENSXCOG00000005498	dkc1	93	86.468	Xiphophorus_couchianus
ENSPKIG00000008443	dkc1	92	85.355	ENSXMAG00000004919	dkc1	87	85.355	Xiphophorus_maculatus