EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000008579 (Gene tree)
Gene ID: 111851411
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 12137 bases
Position: chrPGUA01000221.1:1008246-1020382
Accession: 111851411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000025895	MMR_HSR1	PF01926.23	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000006644	-	3138	XM_023826328	ENSPKIP00000025895	240 (aa)	XP_023682096	UPI000CD61F2E

Gene Model

Click here to download ENSPKIG00000008579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000008579	rab12	70	48.521	ENSPKIG00000003902	RAB1B	77	49.697
ENSPKIG00000008579	rab12	78	38.342	ENSPKIG00000001765	rab33a	69	41.104
ENSPKIG00000008579	rab12	73	38.202	ENSPKIG00000025312	-	78	38.857
ENSPKIG00000008579	rab12	86	37.736	ENSPKIG00000004170	-	80	41.040
ENSPKIG00000008579	rab12	63	30.464	ENSPKIG00000013507	hrasb	86	31.737
ENSPKIG00000008579	rab12	85	44.828	ENSPKIG00000004714	rab1ab	84	50.303
ENSPKIG00000008579	rab12	73	37.714	ENSPKIG00000003261	-	76	40.252
ENSPKIG00000008579	rab12	70	39.884	ENSPKIG00000013397	zgc:101559	73	39.884
ENSPKIG00000008579	rab12	83	33.824	ENSPKIG00000014623	rab9b	76	35.329
ENSPKIG00000008579	rab12	85	38.350	ENSPKIG00000020893	rab11al	76	43.636
ENSPKIG00000008579	rab12	69	39.645	ENSPKIG00000007864	-	82	39.645
ENSPKIG00000008579	rab12	70	44.118	ENSPKIG00000021215	-	79	44.118
ENSPKIG00000008579	rab12	84	36.946	ENSPKIG00000014618	-	76	40.625
ENSPKIG00000008579	rab12	81	47.179	ENSPKIG00000009021	rab3db	76	49.704
ENSPKIG00000008579	rab12	66	33.333	ENSPKIG00000025372	rabl2	69	33.333
ENSPKIG00000008579	rab12	63	31.126	ENSPKIG00000009416	nras	85	32.530
ENSPKIG00000008579	rab12	71	36.723	ENSPKIG00000021975	rab36	68	36.364
ENSPKIG00000008579	rab12	73	36.932	ENSPKIG00000010291	RAB5A	75	38.690
ENSPKIG00000008579	rab12	78	37.234	ENSPKIG00000018584	rab41	73	41.026
ENSPKIG00000008579	rab12	63	32.450	ENSPKIG00000025491	-	86	33.533
ENSPKIG00000008579	rab12	69	31.138	ENSPKIG00000013982	rheb	89	31.138
ENSPKIG00000008579	rab12	69	43.636	ENSPKIG00000001389	-	53	43.636
ENSPKIG00000008579	rab12	85	44.828	ENSPKIG00000005049	-	83	50.296
ENSPKIG00000008579	rab12	63	30.464	ENSPKIG00000000303	HRAS	86	31.737
ENSPKIG00000008579	rab12	84	32.836	ENSPKIG00000004103	rab22a	85	37.821
ENSPKIG00000008579	rab12	73	33.146	ENSPKIG00000008691	si:dkey-13a21.4	81	35.000
ENSPKIG00000008579	rab12	73	46.552	ENSPKIG00000015202	rab30	85	46.552
ENSPKIG00000008579	rab12	72	42.442	ENSPKIG00000005686	-	81	42.442
ENSPKIG00000008579	rab12	74	45.000	ENSPKIG00000001593	rab15	80	45.294
ENSPKIG00000008579	rab12	66	37.195	ENSPKIG00000006695	rab34a	62	37.195
ENSPKIG00000008579	rab12	69	39.053	ENSPKIG00000021143	-	82	39.053
ENSPKIG00000008579	rab12	75	38.547	ENSPKIG00000020112	-	75	39.286
ENSPKIG00000008579	rab12	73	40.331	ENSPKIG00000025682	RAB33B	82	40.331
ENSPKIG00000008579	rab12	71	50.588	ENSPKIG00000014528	-	86	50.625
ENSPKIG00000008579	rab12	64	36.364	ENSPKIG00000024310	rab23	85	34.857
ENSPKIG00000008579	rab12	76	39.344	ENSPKIG00000018888	si:dkey-16l2.16	82	41.040
ENSPKIG00000008579	rab12	85	38.278	ENSPKIG00000007606	rab11a	76	43.030
ENSPKIG00000008579	rab12	68	47.561	ENSPKIG00000009825	rab18a	79	47.561
ENSPKIG00000008579	rab12	85	38.942	ENSPKIG00000011703	-	75	43.636
ENSPKIG00000008579	rab12	70	30.994	ENSPKIG00000002719	si:cabz01085950.1	81	30.909
ENSPKIG00000008579	rab12	72	41.714	ENSPKIG00000025667	-	79	42.353
ENSPKIG00000008579	rab12	68	47.531	ENSPKIG00000025079	rab35b	80	47.531
ENSPKIG00000008579	rab12	82	38.776	ENSPKIG00000006906	rab14	80	41.040
ENSPKIG00000008579	rab12	70	36.257	ENSPKIG00000015234	-	82	36.257
ENSPKIG00000008579	rab12	85	37.799	ENSPKIG00000015102	-	76	43.030
ENSPKIG00000008579	rab12	70	49.112	ENSPKIG00000016450	rab1ba	84	49.112
ENSPKIG00000008579	rab12	66	31.902	ENSPKIG00000019449	KRAS	92	32.961
ENSPKIG00000008579	rab12	84	36.634	ENSPKIG00000024232	-	76	40.881
ENSPKIG00000008579	rab12	80	37.306	ENSPKIG00000001237	-	84	37.968
ENSPKIG00000008579	rab12	72	43.429	ENSPKIG00000020795	rab39bb	78	44.910
ENSPKIG00000008579	rab12	72	41.279	ENSPKIG00000020869	rab25a	81	41.520
ENSPKIG00000008579	rab12	85	38.462	ENSPKIG00000011640	rab11bb	75	43.030
ENSPKIG00000008579	rab12	68	35.329	ENSPKIG00000020212	rab9a	83	35.329
ENSPKIG00000008579	rab12	70	36.994	ENSPKIG00000013084	rab33ba	76	36.994
ENSPKIG00000008579	rab12	70	44.643	ENSPKIG00000009739	rab2a	79	44.643
ENSPKIG00000008579	rab12	70	39.535	ENSPKIG00000021209	si:dkey-34d22.5	78	39.535
ENSPKIG00000008579	rab12	70	45.238	ENSPKIG00000005764	RAB2A	81	47.097
ENSPKIG00000008579	rab12	67	38.750	ENSPKIG00000009578	rab5ab	77	37.500
ENSPKIG00000008579	rab12	68	46.296	ENSPKIG00000016213	-	79	46.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008579	rab12	93	85.778	ENSG00000206418	RAB12	78	90.526	Homo_sapiens
ENSPKIG00000008579	rab12	92	77.928	ENSAMEG00000007452	RAB12	81	82.540	Ailuropoda_melanoleuca
ENSPKIG00000008579	rab12	100	88.571	ENSACIG00000020616	rab12	100	88.571	Amphilophus_citrinellus
ENSPKIG00000008579	rab12	100	88.934	ENSAOCG00000002130	rab12	100	88.525	Amphiprion_ocellaris
ENSPKIG00000008579	rab12	100	88.934	ENSAPEG00000013255	rab12	100	88.525	Amphiprion_percula
ENSPKIG00000008579	rab12	100	88.889	ENSATEG00000019683	rab12	100	89.300	Anabas_testudineus
ENSPKIG00000008579	rab12	84	88.119	ENSACAG00000003360	RAB12	74	89.474	Anolis_carolinensis
ENSPKIG00000008579	rab12	100	89.754	ENSACLG00000007696	rab12	100	89.344	Astatotilapia_calliptera
ENSPKIG00000008579	rab12	100	84.615	ENSAMXG00000004882	rab12	100	85.425	Astyanax_mexicanus
ENSPKIG00000008579	rab12	93	87.111	ENSBTAG00000010356	RAB12	78	91.579	Bos_taurus
ENSPKIG00000008579	rab12	93	84.956	ENSCJAG00000015468	RAB12	56	90.526	Callithrix_jacchus
ENSPKIG00000008579	rab12	93	86.222	ENSCAFG00020023721	RAB12	65	91.053	Canis_lupus_dingo
ENSPKIG00000008579	rab12	93	87.111	ENSCHIG00000016103	RAB12	78	91.579	Capra_hircus
ENSPKIG00000008579	rab12	87	85.238	ENSCPOG00000022689	RAB12	84	91.525	Cavia_porcellus
ENSPKIG00000008579	rab12	93	84.956	ENSCCAG00000022862	RAB12	78	90.526	Cebus_capucinus
ENSPKIG00000008579	rab12	93	84.821	ENSCATG00000037784	RAB12	79	90.526	Cercocebus_atys
ENSPKIG00000008579	rab12	93	85.153	ENSCSAG00000017569	RAB12	55	90.526	Chlorocebus_sabaeus
ENSPKIG00000008579	rab12	93	83.186	ENSCPBG00000028375	RAB12	78	89.474	Chrysemys_picta_bellii
ENSPKIG00000008579	rab12	91	84.545	ENSCANG00000031453	RAB12	85	90.374	Colobus_angolensis_palliatus
ENSPKIG00000008579	rab12	93	86.607	ENSCGRG00001006958	Rab12	65	90.526	Cricetulus_griseus_chok1gshd
ENSPKIG00000008579	rab12	100	88.934	ENSCSEG00000016933	rab12	100	88.525	Cynoglossus_semilaevis
ENSPKIG00000008579	rab12	100	87.449	ENSCVAG00000003539	rab12	100	87.045	Cyprinodon_variegatus
ENSPKIG00000008579	rab12	100	86.250	ENSDARG00000089428	rab12	94	90.498	Danio_rerio
ENSPKIG00000008579	rab12	94	85.022	ENSDORG00000008920	Rab12	84	91.053	Dipodomys_ordii
ENSPKIG00000008579	rab12	76	68.132	ENSEBUG00000006581	rab12	89	68.132	Eptatretus_burgeri
ENSPKIG00000008579	rab12	93	85.714	ENSEASG00005002926	RAB12	65	91.053	Equus_asinus_asinus
ENSPKIG00000008579	rab12	93	85.714	ENSECAG00000007384	RAB12	62	88.095	Equus_caballus
ENSPKIG00000008579	rab12	100	87.552	ENSELUG00000007123	rab12	100	85.833	Esox_lucius
ENSPKIG00000008579	rab12	93	86.222	ENSFCAG00000027710	RAB12	62	87.204	Felis_catus
ENSPKIG00000008579	rab12	100	85.714	ENSFHEG00000004319	rab12	100	86.992	Fundulus_heteroclitus
ENSPKIG00000008579	rab12	86	86.893	ENSGMOG00000012335	rab12	87	86.893	Gadus_morhua
ENSPKIG00000008579	rab12	87	88.038	ENSGALG00000033608	RAB12	76	90.526	Gallus_gallus
ENSPKIG00000008579	rab12	92	87.444	ENSGACG00000016639	rab12	97	90.094	Gasterosteus_aculeatus
ENSPKIG00000008579	rab12	93	83.186	ENSGAGG00000007278	RAB12	78	89.474	Gopherus_agassizii
ENSPKIG00000008579	rab12	100	89.754	ENSHBUG00000008497	rab12	100	89.344	Haplochromis_burtoni
ENSPKIG00000008579	rab12	95	80.932	ENSHGLG00000006189	RAB12	73	90.374	Heterocephalus_glaber_female
ENSPKIG00000008579	rab12	100	85.185	ENSHCOG00000012376	rab12	100	84.836	Hippocampus_comes
ENSPKIG00000008579	rab12	93	90.583	ENSIPUG00000017401	rab12	90	90.498	Ictalurus_punctatus
ENSPKIG00000008579	rab12	94	83.700	ENSSTOG00000025122	RAB12	83	90.476	Ictidomys_tridecemlineatus
ENSPKIG00000008579	rab12	94	85.022	ENSJJAG00000019064	Rab12	83	90.526	Jaculus_jaculus
ENSPKIG00000008579	rab12	100	87.500	ENSKMAG00000020056	rab12	100	87.500	Kryptolebias_marmoratus
ENSPKIG00000008579	rab12	100	88.477	ENSLBEG00000013756	rab12	100	88.889	Labrus_bergylta
ENSPKIG00000008579	rab12	92	87.444	ENSLACG00000010461	RAB12	76	92.105	Latimeria_chalumnae
ENSPKIG00000008579	rab12	100	85.081	ENSLOCG00000002680	rab12	87	90.698	Lepisosteus_oculatus
ENSPKIG00000008579	rab12	93	85.903	ENSMFAG00000043551	RAB12	77	90.526	Macaca_fascicularis
ENSPKIG00000008579	rab12	85	89.268	ENSMNEG00000040853	RAB12	75	90.526	Macaca_nemestrina
ENSPKIG00000008579	rab12	100	88.889	ENSMAMG00000006862	rab12	100	89.300	Mastacembelus_armatus
ENSPKIG00000008579	rab12	100	89.754	ENSMZEG00005024316	rab12	100	89.344	Maylandia_zebra
ENSPKIG00000008579	rab12	84	84.314	ENSMGAG00000009197	RAB12	84	91.228	Meleagris_gallopavo
ENSPKIG00000008579	rab12	93	86.161	ENSMAUG00000008371	Rab12	65	90.526	Mesocricetus_auratus
ENSPKIG00000008579	rab12	93	84.375	ENSMICG00000030661	RAB12	79	90.000	Microcebus_murinus
ENSPKIG00000008579	rab12	90	84.932	ENSMOCG00000000452	Rab12	85	90.860	Microtus_ochrogaster
ENSPKIG00000008579	rab12	87	89.474	ENSMODG00000021452	RAB12	56	91.053	Monodelphis_domestica
ENSPKIG00000008579	rab12	100	86.831	ENSMALG00000015762	rab12	100	87.654	Monopterus_albus
ENSPKIG00000008579	rab12	93	87.500	MGP_CAROLIEiJ_G0021839	Rab12	65	91.579	Mus_caroli
ENSPKIG00000008579	rab12	93	87.500	ENSMUSG00000023460	Rab12	78	91.579	Mus_musculus
ENSPKIG00000008579	rab12	93	87.500	MGP_PahariEiJ_G0020826	Rab12	78	91.579	Mus_pahari
ENSPKIG00000008579	rab12	93	87.500	MGP_SPRETEiJ_G0022750	Rab12	65	91.579	Mus_spretus
ENSPKIG00000008579	rab12	100	81.893	ENSMLUG00000002883	RAB12	78	91.053	Myotis_lucifugus
ENSPKIG00000008579	rab12	89	87.793	ENSNGAG00000024103	-	81	90.526	Nannospalax_galili
ENSPKIG00000008579	rab12	93	77.679	ENSNGAG00000019722	-	76	77.895	Nannospalax_galili
ENSPKIG00000008579	rab12	100	89.754	ENSNBRG00000014428	rab12	100	89.344	Neolamprologus_brichardi
ENSPKIG00000008579	rab12	93	85.778	ENSNLEG00000006939	RAB12	78	90.526	Nomascus_leucogenys
ENSPKIG00000008579	rab12	100	82.114	ENSMEUG00000000493	RAB12	77	91.053	Notamacropus_eugenii
ENSPKIG00000008579	rab12	90	85.388	ENSODEG00000006414	RAB12	85	91.398	Octodon_degus
ENSPKIG00000008579	rab12	100	89.754	ENSONIG00000018469	rab12	100	89.344	Oreochromis_niloticus
ENSPKIG00000008579	rab12	100	88.889	ENSORLG00000003902	rab12	100	88.477	Oryzias_latipes
ENSPKIG00000008579	rab12	100	88.889	ENSORLG00020005131	rab12	100	88.477	Oryzias_latipes_hni
ENSPKIG00000008579	rab12	100	88.477	ENSORLG00015007869	rab12	100	88.477	Oryzias_latipes_hsok
ENSPKIG00000008579	rab12	100	89.300	ENSOMEG00000008191	rab12	100	88.889	Oryzias_melastigma
ENSPKIG00000008579	rab12	87	85.238	ENSOGAG00000028002	RAB12	84	91.525	Otolemur_garnettii
ENSPKIG00000008579	rab12	80	90.052	ENSOARG00000000728	RAB12	78	87.895	Ovis_aries
ENSPKIG00000008579	rab12	85	85.024	ENSPPAG00000009152	RAB12	82	91.908	Pan_paniscus
ENSPKIG00000008579	rab12	93	86.222	ENSPPRG00000024521	RAB12	78	91.053	Panthera_pardus
ENSPKIG00000008579	rab12	93	85.778	ENSPTRG00000009853	RAB12	78	90.526	Pan_troglodytes
ENSPKIG00000008579	rab12	93	85.965	ENSPANG00000009320	RAB12	77	91.053	Papio_anubis
ENSPKIG00000008579	rab12	100	85.124	ENSPMGG00000001890	rab12	100	86.420	Periophthalmus_magnuspinnatus
ENSPKIG00000008579	rab12	93	86.607	ENSPEMG00000021032	Rab12	65	91.053	Peromyscus_maniculatus_bairdii
ENSPKIG00000008579	rab12	100	86.939	ENSPFOG00000001579	rab12	100	86.531	Poecilia_formosa
ENSPKIG00000008579	rab12	100	86.939	ENSPLAG00000013594	rab12	100	86.531	Poecilia_latipinna
ENSPKIG00000008579	rab12	100	86.939	ENSPMEG00000010417	rab12	100	86.531	Poecilia_mexicana
ENSPKIG00000008579	rab12	100	86.939	ENSPREG00000017487	rab12	100	86.939	Poecilia_reticulata
ENSPKIG00000008579	rab12	93	85.778	ENSPPYG00000009015	-	56	90.526	Pongo_abelii
ENSPKIG00000008579	rab12	93	85.333	ENSPCAG00000015007	RAB12	78	91.053	Procavia_capensis
ENSPKIG00000008579	rab12	93	85.778	ENSPCOG00000019816	RAB12	78	90.526	Propithecus_coquereli
ENSPKIG00000008579	rab12	93	85.778	ENSPVAG00000002757	RAB12	78	90.526	Pteropus_vampyrus
ENSPKIG00000008579	rab12	100	89.754	ENSPNYG00000005654	rab12	100	89.344	Pundamilia_nyererei
ENSPKIG00000008579	rab12	100	89.754	ENSPNYG00000023905	rab12	100	89.344	Pundamilia_nyererei
ENSPKIG00000008579	rab12	100	86.235	ENSPNAG00000015031	rab12	100	87.045	Pygocentrus_nattereri
ENSPKIG00000008579	rab12	93	85.778	ENSRNOG00000019295	Rab12	78	89.529	Rattus_norvegicus
ENSPKIG00000008579	rab12	93	84.821	ENSRBIG00000028760	RAB12	82	90.526	Rhinopithecus_bieti
ENSPKIG00000008579	rab12	94	85.022	ENSRROG00000019249	RAB12	79	90.526	Rhinopithecus_roxellana
ENSPKIG00000008579	rab12	95	80.000	ENSSBOG00000021125	RAB12	67	91.477	Saimiri_boliviensis_boliviensis
ENSPKIG00000008579	rab12	93	84.513	ENSSHAG00000001489	RAB12	84	91.053	Sarcophilus_harrisii
ENSPKIG00000008579	rab12	100	87.190	ENSSMAG00000012678	rab12	100	88.477	Scophthalmus_maximus
ENSPKIG00000008579	rab12	100	89.300	ENSSDUG00000008505	rab12	100	89.712	Seriola_dumerili
ENSPKIG00000008579	rab12	100	89.300	ENSSLDG00000022239	rab12	100	89.712	Seriola_lalandi_dorsalis
ENSPKIG00000008579	rab12	85	88.725	ENSSPUG00000003222	RAB12	77	90.526	Sphenodon_punctatus
ENSPKIG00000008579	rab12	100	89.344	ENSSPAG00000010822	rab12	100	88.934	Stegastes_partitus
ENSPKIG00000008579	rab12	93	87.111	ENSSSCG00000038026	RAB12	78	91.579	Sus_scrofa
ENSPKIG00000008579	rab12	87	88.517	ENSTGUG00000009889	RAB12	76	90.000	Taeniopygia_guttata
ENSPKIG00000008579	rab12	100	86.420	ENSTRUG00000024455	rab12	100	86.008	Takifugu_rubripes
ENSPKIG00000008579	rab12	100	88.066	ENSTNIG00000014859	rab12	100	87.654	Tetraodon_nigroviridis
ENSPKIG00000008579	rab12	85	88.670	ENSTTRG00000008711	RAB12	85	89.947	Tursiops_truncatus
ENSPKIG00000008579	rab12	93	86.222	ENSUAMG00000018092	RAB12	78	91.053	Ursus_americanus
ENSPKIG00000008579	rab12	93	83.556	ENSVVUG00000011748	RAB12	84	90.860	Vulpes_vulpes
ENSPKIG00000008579	rab12	93	83.843	ENSXETG00000004289	rab12	61	90.576	Xenopus_tropicalis
ENSPKIG00000008579	rab12	100	86.122	ENSXCOG00000019310	rab12	100	86.122	Xiphophorus_couchianus
ENSPKIG00000008579	rab12	100	86.531	ENSXMAG00000023617	rab12	100	86.531	Xiphophorus_maculatus