EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000008592 (Gene tree)
Gene ID: 111854565
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 10702 bases
Position: chrPGUA01000277.1:195742-206443
Accession: 111854565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000025905	RRM_1	PF00076.22	2.5e-13	1	1
ENSPKIP00000025924	RRM_1	PF00076.22	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000006672	-	1321	-	ENSPKIP00000025924	319 (aa)	XP_023688390	UPI000CD5F068
ENSPKIT00000006653	-	2831	-	ENSPKIP00000025905	318 (aa)	XP_023688396	UPI000CD5E6AA

Gene Model

Click here to download ENSPKIG00000008592's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000008592	-	98	86.262	ENSPKIG00000022837	-	98	86.262
ENSPKIG00000008592	-	74	52.245	ENSPKIG00000015926	-	82	53.498
ENSPKIG00000008592	-	86	48.188	ENSPKIG00000004894	raly	75	54.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008592	-	86	50.355	ENSG00000184672	RALYL	99	73.810	Homo_sapiens
ENSPKIG00000008592	-	87	82.310	ENSAPOG00000006963	hnrnpc	91	81.533	Acanthochromis_polyacanthus
ENSPKIG00000008592	-	88	80.142	ENSACIG00000000270	-	92	79.787	Amphilophus_citrinellus
ENSPKIG00000008592	-	97	72.611	ENSACIG00000016568	-	96	75.862	Amphilophus_citrinellus
ENSPKIG00000008592	-	87	81.949	ENSAOCG00000003896	-	91	81.185	Amphiprion_ocellaris
ENSPKIG00000008592	-	96	75.316	ENSAOCG00000021616	-	83	79.779	Amphiprion_ocellaris
ENSPKIG00000008592	-	97	70.418	ENSAPEG00000019962	-	85	79.412	Amphiprion_percula
ENSPKIG00000008592	-	87	81.949	ENSAPEG00000001489	-	91	81.185	Amphiprion_percula
ENSPKIG00000008592	-	88	80.427	ENSATEG00000011734	-	92	80.071	Anabas_testudineus
ENSPKIG00000008592	-	85	80.147	ENSATEG00000018006	-	92	75.581	Anabas_testudineus
ENSPKIG00000008592	-	71	52.941	ENSAPLG00000015574	RALYL	89	48.529	Anas_platyrhynchos
ENSPKIG00000008592	-	71	52.101	ENSACAG00000028464	RALYL	79	52.542	Anolis_carolinensis
ENSPKIG00000008592	-	86	50.000	ENSANAG00000023383	RALYL	88	52.672	Aotus_nancymaae
ENSPKIG00000008592	-	85	78.467	ENSACLG00000005707	-	90	79.197	Astatotilapia_calliptera
ENSPKIG00000008592	-	87	80.435	ENSACLG00000013636	-	89	78.746	Astatotilapia_calliptera
ENSPKIG00000008592	-	87	80.797	ENSACLG00000000995	-	91	79.791	Astatotilapia_calliptera
ENSPKIG00000008592	-	85	79.630	ENSAMXG00000034915	zgc:55733	91	76.296	Astyanax_mexicanus
ENSPKIG00000008592	-	88	66.197	ENSAMXG00000042946	hnrnpc	97	80.208	Astyanax_mexicanus
ENSPKIG00000008592	-	86	49.645	ENSCJAG00000000402	RALYL	88	52.290	Callithrix_jacchus
ENSPKIG00000008592	-	95	45.570	ENSCPOG00000012314	RALYL	79	52.227	Cavia_porcellus
ENSPKIG00000008592	-	95	46.535	ENSCCAG00000025003	RALYL	82	73.810	Cebus_capucinus
ENSPKIG00000008592	-	86	50.355	ENSCATG00000042145	RALYL	88	53.053	Cercocebus_atys
ENSPKIG00000008592	-	71	54.008	ENSCLAG00000005228	RALYL	79	52.227	Chinchilla_lanigera
ENSPKIG00000008592	-	69	54.545	ENSCHOG00000013228	RALYL	77	50.424	Choloepus_hoffmanni
ENSPKIG00000008592	-	86	50.355	ENSCANG00000039144	RALYL	88	53.053	Colobus_angolensis_palliatus
ENSPKIG00000008592	-	85	48.763	ENSCGRG00001009241	Ralyl	79	53.814	Cricetulus_griseus_chok1gshd
ENSPKIG00000008592	-	81	76.562	ENSCSEG00000021349	-	82	72.694	Cynoglossus_semilaevis
ENSPKIG00000008592	-	70	73.128	ENSCSEG00000019769	-	75	73.128	Cynoglossus_semilaevis
ENSPKIG00000008592	-	88	64.311	ENSCVAG00000002797	-	86	63.498	Cyprinodon_variegatus
ENSPKIG00000008592	-	96	74.455	ENSCVAG00000016981	-	81	76.557	Cyprinodon_variegatus
ENSPKIG00000008592	-	91	80.556	ENSDARG00000103845	zgc:55733	93	77.528	Danio_rerio
ENSPKIG00000008592	-	78	79.839	ENSDARG00000053810	hnrnpc	82	76.103	Danio_rerio
ENSPKIG00000008592	-	86	49.320	ENSDORG00000003721	Ralyl	88	50.735	Dipodomys_ordii
ENSPKIG00000008592	-	53	57.542	ENSETEG00000014028	RALYL	85	60.479	Echinops_telfairi
ENSPKIG00000008592	-	69	48.261	ENSEBUG00000012363	hnrnpc	75	44.314	Eptatretus_burgeri
ENSPKIG00000008592	-	69	49.327	ENSEBUG00000006049	RALYL	78	47.111	Eptatretus_burgeri
ENSPKIG00000008592	-	86	48.980	ENSEEUG00000007202	RALYL	90	49.645	Erinaceus_europaeus
ENSPKIG00000008592	-	80	80.524	ENSELUG00000007714	-	93	79.570	Esox_lucius
ENSPKIG00000008592	-	97	82.315	ENSELUG00000004132	-	100	81.994	Esox_lucius
ENSPKIG00000008592	-	69	57.466	ENSFALG00000008647	RALYL	99	55.708	Ficedula_albicollis
ENSPKIG00000008592	-	87	77.061	ENSFHEG00000003605	-	92	74.913	Fundulus_heteroclitus
ENSPKIG00000008592	-	82	74.820	ENSFHEG00000007278	-	82	72.563	Fundulus_heteroclitus
ENSPKIG00000008592	-	71	55.702	ENSGALG00000036938	RALYL	79	53.390	Gallus_gallus
ENSPKIG00000008592	-	97	74.688	ENSGAFG00000020992	-	85	77.323	Gambusia_affinis
ENSPKIG00000008592	-	87	74.910	ENSGAFG00000020486	-	91	73.519	Gambusia_affinis
ENSPKIG00000008592	-	100	72.121	ENSGACG00000017772	-	99	76.718	Gasterosteus_aculeatus
ENSPKIG00000008592	-	70	71.300	ENSGACG00000018932	-	88	71.300	Gasterosteus_aculeatus
ENSPKIG00000008592	-	86	50.355	ENSGGOG00000000841	RALYL	88	53.053	Gorilla_gorilla
ENSPKIG00000008592	-	87	81.159	ENSHBUG00000018342	-	91	80.139	Haplochromis_burtoni
ENSPKIG00000008592	-	100	74.233	ENSHBUG00000010527	-	84	79.562	Haplochromis_burtoni
ENSPKIG00000008592	-	71	53.586	ENSHGLG00000004866	RALYL	79	51.822	Heterocephalus_glaber_female
ENSPKIG00000008592	-	71	53.586	ENSHGLG00100017480	RALYL	79	51.822	Heterocephalus_glaber_male
ENSPKIG00000008592	-	89	71.380	ENSHCOG00000012333	hnrnpc	91	74.468	Hippocampus_comes
ENSPKIG00000008592	-	91	77.778	ENSIPUG00000008666	zgc:55733	100	77.966	Ictalurus_punctatus
ENSPKIG00000008592	-	83	80.303	ENSIPUG00000011271	hnrnpc	100	79.915	Ictalurus_punctatus
ENSPKIG00000008592	-	86	48.639	ENSSTOG00000012583	RALYL	90	50.000	Ictidomys_tridecemlineatus
ENSPKIG00000008592	-	96	75.159	ENSKMAG00000018265	-	100	73.780	Kryptolebias_marmoratus
ENSPKIG00000008592	-	88	77.305	ENSKMAG00000011170	-	90	77.113	Kryptolebias_marmoratus
ENSPKIG00000008592	-	88	72.165	ENSLBEG00000024418	-	92	69.416	Labrus_bergylta
ENSPKIG00000008592	-	87	77.256	ENSLBEG00000006979	-	91	77.978	Labrus_bergylta
ENSPKIG00000008592	-	100	76.923	ENSLBEG00000006193	-	84	79.412	Labrus_bergylta
ENSPKIG00000008592	-	84	74.453	ENSLOCG00000002560	hnrnpc	91	73.358	Lepisosteus_oculatus
ENSPKIG00000008592	-	86	50.355	ENSMNEG00000033288	RALYL	88	53.053	Macaca_nemestrina
ENSPKIG00000008592	-	86	50.355	ENSMLEG00000038284	RALYL	88	53.053	Mandrillus_leucophaeus
ENSPKIG00000008592	-	100	75.767	ENSMAMG00000008033	-	90	79.779	Mastacembelus_armatus
ENSPKIG00000008592	-	87	82.609	ENSMAMG00000012236	-	90	81.533	Mastacembelus_armatus
ENSPKIG00000008592	-	100	73.926	ENSMZEG00005024249	-	84	79.197	Maylandia_zebra
ENSPKIG00000008592	-	87	80.797	ENSMZEG00005020460	-	91	79.791	Maylandia_zebra
ENSPKIG00000008592	-	85	48.763	ENSMAUG00000015149	Ralyl	79	53.814	Mesocricetus_auratus
ENSPKIG00000008592	-	86	50.883	ENSMICG00000005558	RALYL	85	73.810	Microcebus_murinus
ENSPKIG00000008592	-	85	48.057	ENSMOCG00000017371	Ralyl	88	48.897	Microtus_ochrogaster
ENSPKIG00000008592	-	84	79.182	ENSMMOG00000021465	-	92	79.554	Mola_mola
ENSPKIG00000008592	-	91	76.589	ENSMMOG00000019520	-	92	79.787	Mola_mola
ENSPKIG00000008592	-	82	71.863	ENSMALG00000007520	-	91	70.357	Monopterus_albus
ENSPKIG00000008592	-	85	79.044	ENSMALG00000014623	-	84	78.676	Monopterus_albus
ENSPKIG00000008592	-	85	48.410	ENSMUSG00000039717	Ralyl	99	72.619	Mus_musculus
ENSPKIG00000008592	-	86	49.320	ENSMPUG00000010724	RALYL	79	52.966	Mustela_putorius_furo
ENSPKIG00000008592	-	85	49.470	ENSNGAG00000013375	Ralyl	88	50.368	Nannospalax_galili
ENSPKIG00000008592	-	100	76.524	ENSNBRG00000015676	-	92	75.564	Neolamprologus_brichardi
ENSPKIG00000008592	-	88	81.495	ENSNBRG00000004912	-	95	79.060	Neolamprologus_brichardi
ENSPKIG00000008592	-	86	50.355	ENSNLEG00000002702	RALYL	80	54.762	Nomascus_leucogenys
ENSPKIG00000008592	-	57	52.332	ENSOPRG00000013650	-	98	48.276	Ochotona_princeps
ENSPKIG00000008592	-	71	54.008	ENSODEG00000001012	RALYL	79	51.822	Octodon_degus
ENSPKIG00000008592	-	100	73.620	ENSONIG00000018350	-	84	79.562	Oreochromis_niloticus
ENSPKIG00000008592	-	86	79.004	ENSONIG00000007859	-	93	78.261	Oreochromis_niloticus
ENSPKIG00000008592	-	87	69.534	ENSORLG00000009999	-	91	68.166	Oryzias_latipes
ENSPKIG00000008592	-	81	77.068	ENSORLG00000003144	-	82	77.143	Oryzias_latipes
ENSPKIG00000008592	-	87	69.176	ENSORLG00020018228	hnrnpc	91	67.820	Oryzias_latipes_hni
ENSPKIG00000008592	-	81	77.068	ENSORLG00015009460	-	82	77.143	Oryzias_latipes_hsok
ENSPKIG00000008592	-	87	69.534	ENSORLG00015019755	-	91	68.166	Oryzias_latipes_hsok
ENSPKIG00000008592	-	81	71.264	ENSOMEG00000020488	-	85	69.742	Oryzias_melastigma
ENSPKIG00000008592	-	96	76.358	ENSOMEG00000022665	-	83	79.121	Oryzias_melastigma
ENSPKIG00000008592	-	86	50.355	ENSPPAG00000038705	RALYL	88	53.053	Pan_paniscus
ENSPKIG00000008592	-	86	51.761	ENSPPRG00000018612	RALYL	88	51.527	Panthera_pardus
ENSPKIG00000008592	-	86	51.761	ENSPTIG00000020331	RALYL	88	51.527	Panthera_tigris_altaica
ENSPKIG00000008592	-	86	50.355	ENSPTRG00000020381	RALYL	88	53.053	Pan_troglodytes
ENSPKIG00000008592	-	86	50.355	ENSPANG00000029305	RALYL	88	53.053	Papio_anubis
ENSPKIG00000008592	-	71	53.361	ENSPSIG00000011135	RALYL	87	48.162	Pelodiscus_sinensis
ENSPKIG00000008592	-	95	61.842	ENSPMGG00000017774	-	90	67.593	Periophthalmus_magnuspinnatus
ENSPKIG00000008592	-	70	86.486	ENSPMGG00000013144	-	83	81.982	Periophthalmus_magnuspinnatus
ENSPKIG00000008592	-	85	48.763	ENSPEMG00000016447	Ralyl	79	53.814	Peromyscus_maniculatus_bairdii
ENSPKIG00000008592	-	69	53.448	ENSPMAG00000002407	RALYL	99	53.448	Petromyzon_marinus
ENSPKIG00000008592	-	96	74.051	ENSPFOG00000002643	-	100	70.948	Poecilia_formosa
ENSPKIG00000008592	-	87	75.812	ENSPFOG00000001583	-	91	75.261	Poecilia_formosa
ENSPKIG00000008592	-	96	74.367	ENSPLAG00000000061	-	100	73.333	Poecilia_latipinna
ENSPKIG00000008592	-	87	74.729	ENSPLAG00000015305	-	91	73.519	Poecilia_latipinna
ENSPKIG00000008592	-	87	77.419	ENSPMEG00000004802	-	91	74.216	Poecilia_mexicana
ENSPKIG00000008592	-	96	73.734	ENSPMEG00000016524	-	82	77.941	Poecilia_mexicana
ENSPKIG00000008592	-	89	71.986	ENSPREG00000001852	-	89	77.574	Poecilia_reticulata
ENSPKIG00000008592	-	87	75.451	ENSPREG00000007928	-	91	74.216	Poecilia_reticulata
ENSPKIG00000008592	-	95	45.223	ENSPVAG00000010821	RALYL	85	52.941	Pteropus_vampyrus
ENSPKIG00000008592	-	89	78.947	ENSPNYG00000020293	-	87	80.608	Pundamilia_nyererei
ENSPKIG00000008592	-	99	70.978	ENSPNYG00000003747	-	90	79.562	Pundamilia_nyererei
ENSPKIG00000008592	-	85	75.636	ENSPNAG00000019200	zgc:55733	86	72.161	Pygocentrus_nattereri
ENSPKIG00000008592	-	78	81.928	ENSPNAG00000015686	hnrnpc	89	79.412	Pygocentrus_nattereri
ENSPKIG00000008592	-	86	50.355	ENSRROG00000023925	RALYL	87	72.093	Rhinopithecus_roxellana
ENSPKIG00000008592	-	100	78.056	ENSSFOG00015012015	-	95	80.564	Scleropages_formosus
ENSPKIG00000008592	-	82	84.791	ENSSFOG00015012924	-	81	98.750	Scleropages_formosus
ENSPKIG00000008592	-	100	74.085	ENSSMAG00000011147	-	93	76.953	Scophthalmus_maximus
ENSPKIG00000008592	-	87	78.777	ENSSMAG00000013592	-	91	76.109	Scophthalmus_maximus
ENSPKIG00000008592	-	87	82.246	ENSSDUG00000001723	-	91	81.882	Seriola_dumerili
ENSPKIG00000008592	-	100	73.375	ENSSDUG00000006730	-	84	79.853	Seriola_dumerili
ENSPKIG00000008592	-	85	82.657	ENSSLDG00000007454	-	91	82.105	Seriola_lalandi_dorsalis
ENSPKIG00000008592	-	85	78.755	ENSSLDG00000007474	-	92	79.853	Seriola_lalandi_dorsalis
ENSPKIG00000008592	-	100	76.758	ENSSPAG00000013996	-	84	80.515	Stegastes_partitus
ENSPKIG00000008592	-	86	82.051	ENSSPAG00000023204	-	91	81.185	Stegastes_partitus
ENSPKIG00000008592	-	71	53.361	ENSTGUG00000011689	RALYL	81	53.390	Taeniopygia_guttata
ENSPKIG00000008592	-	89	77.273	ENSTRUG00000020158	-	84	76.336	Takifugu_rubripes
ENSPKIG00000008592	-	82	75.758	ENSTNIG00000007427	-	84	75.000	Tetraodon_nigroviridis
ENSPKIG00000008592	-	92	66.667	ENSTNIG00000000334	-	94	72.624	Tetraodon_nigroviridis
ENSPKIG00000008592	-	79	46.183	ENSTBEG00000005551	RALYL	97	47.328	Tupaia_belangeri
ENSPKIG00000008592	-	69	54.425	ENSTTRG00000015762	RALYL	76	56.195	Tursiops_truncatus
ENSPKIG00000008592	-	71	52.193	ENSVPAG00000008501	RALYL	88	47.710	Vicugna_pacos
ENSPKIG00000008592	-	89	68.641	ENSXCOG00000006552	-	90	66.436	Xiphophorus_couchianus
ENSPKIG00000008592	-	89	71.986	ENSXMAG00000022849	-	86	77.574	Xiphophorus_maculatus
ENSPKIG00000008592	-	87	75.627	ENSXMAG00000009333	-	91	73.519	Xiphophorus_maculatus