EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000008691 (Gene tree)
Gene ID: 111856934
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6249 bases
Position: chrPGUA01000033.1:2105332-2111580
Accession: 111856934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000026067	MMR_HSR1	PF01926.23	3.8e-07	1	1
ENSPKIP00000026060	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000006808	-	591	-	ENSPKIP00000026060	196 (aa)	-	-
ENSPKIT00000006815	-	618	-	ENSPKIP00000026067	205 (aa)	XP_023693056	UPI000CD5ED7F

Gene Model

Click here to download ENSPKIG00000008691's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04137	Mitophagy - animal	KEGG
pki04140	Autophagy - animal	KEGG
pki04144	Endocytosis	KEGG
pki04145	Phagosome	KEGG
pki05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000008691	si:dkey-13a21.4	89	57.377	ENSPKIG00000021143	-	86	58.523
ENSPKIG00000008691	si:dkey-13a21.4	73	30.000	ENSPKIG00000025491	-	84	31.056
ENSPKIG00000008691	si:dkey-13a21.4	95	33.824	ENSPKIG00000007606	rab11a	93	33.824
ENSPKIG00000008691	si:dkey-13a21.4	81	38.365	ENSPKIG00000001389	-	50	38.365
ENSPKIG00000008691	si:dkey-13a21.4	100	33.014	ENSPKIG00000004714	rab1ab	100	33.014
ENSPKIG00000008691	si:dkey-13a21.4	96	33.333	ENSPKIG00000003902	RAB1B	91	33.333
ENSPKIG00000008691	si:dkey-13a21.4	80	36.709	ENSPKIG00000016213	-	80	35.329
ENSPKIG00000008691	si:dkey-13a21.4	58	33.913	ENSPKIG00000010093	rap2b	88	35.714
ENSPKIG00000008691	si:dkey-13a21.4	81	35.625	ENSPKIG00000005931	DNAJC27	59	35.404
ENSPKIG00000008691	si:dkey-13a21.4	84	36.527	ENSPKIG00000005686	-	87	34.184
ENSPKIG00000008691	si:dkey-13a21.4	82	38.650	ENSPKIG00000005764	RAB2A	81	37.580
ENSPKIG00000008691	si:dkey-13a21.4	95	33.333	ENSPKIG00000015102	-	93	33.333
ENSPKIG00000008691	si:dkey-13a21.4	90	32.258	ENSPKIG00000001237	-	84	32.258
ENSPKIG00000008691	si:dkey-13a21.4	97	32.338	ENSPKIG00000018584	rab41	93	32.338
ENSPKIG00000008691	si:dkey-13a21.4	97	31.658	ENSPKIG00000003261	-	93	31.658
ENSPKIG00000008691	si:dkey-13a21.4	85	36.517	ENSPKIG00000021209	si:dkey-34d22.5	79	36.517
ENSPKIG00000008691	si:dkey-13a21.4	100	33.010	ENSPKIG00000018888	si:dkey-16l2.16	82	35.227
ENSPKIG00000008691	si:dkey-13a21.4	81	35.404	ENSPKIG00000005039	dnajc27	89	35.185
ENSPKIG00000008691	si:dkey-13a21.4	81	36.250	ENSPKIG00000020795	rab39bb	76	35.758
ENSPKIG00000008691	si:dkey-13a21.4	98	33.168	ENSPKIG00000020112	-	91	33.168
ENSPKIG00000008691	si:dkey-13a21.4	89	36.066	ENSPKIG00000014528	-	89	36.066
ENSPKIG00000008691	si:dkey-13a21.4	97	55.500	ENSPKIG00000007864	-	96	55.500
ENSPKIG00000008691	si:dkey-13a21.4	96	32.487	ENSPKIG00000009578	rab5ab	89	32.487
ENSPKIG00000008691	si:dkey-13a21.4	81	38.125	ENSPKIG00000011640	rab11bb	72	38.125
ENSPKIG00000008691	si:dkey-13a21.4	81	35.849	ENSPKIG00000025079	rab35b	81	34.731
ENSPKIG00000008691	si:dkey-13a21.4	80	41.139	ENSPKIG00000020869	rab25a	76	40.244
ENSPKIG00000008691	si:dkey-13a21.4	55	40.741	ENSPKIG00000021308	-	86	40.741
ENSPKIG00000008691	si:dkey-13a21.4	98	32.673	ENSPKIG00000005049	-	99	32.673
ENSPKIG00000008691	si:dkey-13a21.4	96	32.673	ENSPKIG00000013397	zgc:101559	84	32.673
ENSPKIG00000008691	si:dkey-13a21.4	81	36.478	ENSPKIG00000009021	rab3db	75	34.706
ENSPKIG00000008691	si:dkey-13a21.4	96	32.487	ENSPKIG00000010291	RAB5A	89	32.487
ENSPKIG00000008691	si:dkey-13a21.4	95	46.734	ENSPKIG00000014623	rab9b	88	46.734
ENSPKIG00000008691	si:dkey-13a21.4	88	30.058	ENSPKIG00000024310	rab23	80	33.929
ENSPKIG00000008691	si:dkey-13a21.4	85	35.593	ENSPKIG00000015234	-	83	35.593
ENSPKIG00000008691	si:dkey-13a21.4	86	32.402	ENSPKIG00000006695	rab34a	68	32.402
ENSPKIG00000008691	si:dkey-13a21.4	96	35.437	ENSPKIG00000020893	rab11al	94	33.981
ENSPKIG00000008691	si:dkey-13a21.4	81	38.365	ENSPKIG00000011703	-	71	38.365
ENSPKIG00000008691	si:dkey-13a21.4	99	52.683	ENSPKIG00000025312	-	83	58.152
ENSPKIG00000008691	si:dkey-13a21.4	81	38.750	ENSPKIG00000025667	-	78	37.647
ENSPKIG00000008691	si:dkey-13a21.4	85	36.842	ENSPKIG00000001765	rab33a	71	36.842
ENSPKIG00000008691	si:dkey-13a21.4	91	33.880	ENSPKIG00000013326	rab34b	68	33.520
ENSPKIG00000008691	si:dkey-13a21.4	85	36.000	ENSPKIG00000004170	-	80	36.000
ENSPKIG00000008691	si:dkey-13a21.4	93	36.788	ENSPKIG00000009825	rab18a	90	34.759
ENSPKIG00000008691	si:dkey-13a21.4	90	32.402	ENSPKIG00000001593	rab15	77	32.934
ENSPKIG00000008691	si:dkey-13a21.4	78	39.744	ENSPKIG00000013084	rab33ba	65	40.000
ENSPKIG00000008691	si:dkey-13a21.4	86	31.285	ENSPKIG00000013982	rheb	79	32.026
ENSPKIG00000008691	si:dkey-13a21.4	81	35.000	ENSPKIG00000008579	rab12	73	33.146
ENSPKIG00000008691	si:dkey-13a21.4	79	37.179	ENSPKIG00000025682	RAB33B	71	37.179
ENSPKIG00000008691	si:dkey-13a21.4	87	33.333	ENSPKIG00000021215	-	76	34.320
ENSPKIG00000008691	si:dkey-13a21.4	93	35.751	ENSPKIG00000004103	rab22a	89	36.527
ENSPKIG00000008691	si:dkey-13a21.4	82	33.125	ENSPKIG00000025372	rabl2	71	32.727
ENSPKIG00000008691	si:dkey-13a21.4	97	32.161	ENSPKIG00000024232	-	93	32.161
ENSPKIG00000008691	si:dkey-13a21.4	96	33.838	ENSPKIG00000016450	rab1ba	96	33.838
ENSPKIG00000008691	si:dkey-13a21.4	85	36.000	ENSPKIG00000006906	rab14	80	36.000
ENSPKIG00000008691	si:dkey-13a21.4	97	32.338	ENSPKIG00000014618	-	93	32.338
ENSPKIG00000008691	si:dkey-13a21.4	92	37.705	ENSPKIG00000015202	rab30	96	36.869
ENSPKIG00000008691	si:dkey-13a21.4	91	32.632	ENSPKIG00000021975	rab36	75	32.632
ENSPKIG00000008691	si:dkey-13a21.4	82	51.553	ENSPKIG00000020212	rab9a	83	51.205
ENSPKIG00000008691	si:dkey-13a21.4	82	38.650	ENSPKIG00000009739	rab2a	75	38.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008691	si:dkey-13a21.4	96	63.959	ENSACIG00000011024	si:dkey-13a21.4	96	63.959	Amphilophus_citrinellus
ENSPKIG00000008691	si:dkey-13a21.4	96	62.437	ENSAOCG00000020491	si:dkey-13a21.4	96	62.437	Amphiprion_ocellaris
ENSPKIG00000008691	si:dkey-13a21.4	96	62.437	ENSAPEG00000023338	si:dkey-13a21.4	88	62.437	Amphiprion_percula
ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	ENSATEG00000014958	si:dkey-13a21.4	96	63.452	Anabas_testudineus
ENSPKIG00000008691	si:dkey-13a21.4	95	54.255	ENSACAG00000012345	-	85	57.310	Anolis_carolinensis
ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	ENSACLG00000021109	si:dkey-13a21.4	95	62.944	Astatotilapia_calliptera
ENSPKIG00000008691	si:dkey-13a21.4	100	54.976	ENSAMXG00000032663	si:dkey-13a21.4	97	54.976	Astyanax_mexicanus
ENSPKIG00000008691	si:dkey-13a21.4	85	57.062	WBGene00004271	rab-7	85	57.062	Caenorhabditis_elegans
ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	ENSCVAG00000001150	si:dkey-13a21.4	96	62.944	Cyprinodon_variegatus
ENSPKIG00000008691	si:dkey-13a21.4	99	62.136	ENSDARG00000026098	si:dkey-13a21.4	100	62.136	Danio_rerio
ENSPKIG00000008691	si:dkey-13a21.4	88	53.714	ENSDNOG00000043559	-	92	51.596	Dasypus_novemcinctus
ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	ENSFHEG00000002502	si:dkey-13a21.4	95	63.452	Fundulus_heteroclitus
ENSPKIG00000008691	si:dkey-13a21.4	96	62.437	ENSGAFG00000020102	si:dkey-13a21.4	96	62.437	Gambusia_affinis
ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	ENSHBUG00000014023	si:dkey-13a21.4	95	63.452	Haplochromis_burtoni
ENSPKIG00000008691	si:dkey-13a21.4	82	65.625	ENSKMAG00000021039	si:dkey-13a21.4	71	64.118	Kryptolebias_marmoratus
ENSPKIG00000008691	si:dkey-13a21.4	100	61.463	ENSLBEG00000018180	si:dkey-13a21.4	100	61.463	Labrus_bergylta
ENSPKIG00000008691	si:dkey-13a21.4	100	64.390	ENSLOCG00000014749	si:dkey-13a21.4	100	64.390	Lepisosteus_oculatus
ENSPKIG00000008691	si:dkey-13a21.4	88	54.070	ENSLAFG00000028984	-	86	53.107	Loxodonta_africana
ENSPKIG00000008691	si:dkey-13a21.4	96	63.959	ENSMAMG00000021095	si:dkey-13a21.4	96	63.959	Mastacembelus_armatus
ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	ENSMZEG00005010220	si:dkey-13a21.4	95	62.944	Maylandia_zebra
ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	ENSNBRG00000023214	si:dkey-13a21.4	95	63.452	Neolamprologus_brichardi
ENSPKIG00000008691	si:dkey-13a21.4	96	63.452	ENSONIG00000020296	si:dkey-13a21.4	96	63.452	Oreochromis_niloticus
ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	ENSORLG00000025098	si:dkey-13a21.4	96	64.467	Oryzias_latipes
ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	ENSORLG00020019465	si:dkey-13a21.4	96	64.467	Oryzias_latipes_hni
ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	ENSORLG00015015121	si:dkey-13a21.4	96	64.467	Oryzias_latipes_hsok
ENSPKIG00000008691	si:dkey-13a21.4	93	62.827	ENSPMGG00000023170	si:dkey-13a21.4	94	62.312	Periophthalmus_magnuspinnatus
ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	ENSPFOG00000015409	si:dkey-13a21.4	96	61.929	Poecilia_formosa
ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	ENSPLAG00000019688	si:dkey-13a21.4	96	61.929	Poecilia_latipinna
ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	ENSPMEG00000019159	si:dkey-13a21.4	96	61.929	Poecilia_mexicana
ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	ENSPREG00000022241	si:dkey-13a21.4	96	61.929	Poecilia_reticulata
ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	ENSPNYG00000018613	si:dkey-13a21.4	95	62.944	Pundamilia_nyererei
ENSPKIG00000008691	si:dkey-13a21.4	88	50.000	YML001W	YPT7	88	50.000	Saccharomyces_cerevisiae
ENSPKIG00000008691	si:dkey-13a21.4	100	70.732	ENSSFOG00015009566	si:dkey-13a21.4	100	70.732	Scleropages_formosus
ENSPKIG00000008691	si:dkey-13a21.4	96	62.944	ENSSMAG00000013945	si:dkey-13a21.4	98	61.275	Scophthalmus_maximus
ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	ENSSDUG00000019738	si:dkey-13a21.4	96	64.467	Seriola_dumerili
ENSPKIG00000008691	si:dkey-13a21.4	96	64.467	ENSSLDG00000011597	si:dkey-13a21.4	96	64.467	Seriola_lalandi_dorsalis
ENSPKIG00000008691	si:dkey-13a21.4	95	58.673	ENSXETG00000014257	mgc75872	93	59.474	Xenopus_tropicalis