EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000008828 (Gene tree)
Gene ID: 111840648
Gene Symbol: rnpc3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 5863 bases
Position: chrPGUA01000009.1:3502594-3508456
Accession: 111840648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000026276	RRM_1	PF00076.22	1.6e-15	1	2
ENSPKIP00000026276	RRM_1	PF00076.22	1.6e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000007029	-	2955	-	ENSPKIP00000026276	511 (aa)	XP_023661427	UPI000CD5DC83

Gene Model

Click here to download ENSPKIG00000008828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008828	rnpc3	95	52.055	ENSG00000185946	RNPC3	96	54.135	Homo_sapiens
ENSPKIG00000008828	rnpc3	99	64.118	ENSAPOG00000017371	rnpc3	99	66.471	Acanthochromis_polyacanthus
ENSPKIG00000008828	rnpc3	95	51.670	ENSAMEG00000001694	RNPC3	93	52.965	Ailuropoda_melanoleuca
ENSPKIG00000008828	rnpc3	98	60.665	ENSACIG00000021043	rnpc3	99	62.157	Amphilophus_citrinellus
ENSPKIG00000008828	rnpc3	99	63.992	ENSAOCG00000014052	rnpc3	98	66.928	Amphiprion_ocellaris
ENSPKIG00000008828	rnpc3	99	63.796	ENSAPEG00000008739	rnpc3	98	66.732	Amphiprion_percula
ENSPKIG00000008828	rnpc3	99	63.372	ENSATEG00000021263	rnpc3	99	64.922	Anabas_testudineus
ENSPKIG00000008828	rnpc3	87	55.357	ENSAPLG00000015605	RNPC3	98	57.366	Anas_platyrhynchos
ENSPKIG00000008828	rnpc3	95	57.700	ENSACAG00000002029	RNPC3	94	55.236	Anolis_carolinensis
ENSPKIG00000008828	rnpc3	95	51.076	ENSANAG00000019950	RNPC3	95	52.590	Aotus_nancymaae
ENSPKIG00000008828	rnpc3	97	63.800	ENSACLG00000014702	rnpc3	98	66.000	Astatotilapia_calliptera
ENSPKIG00000008828	rnpc3	99	63.938	ENSAMXG00000033372	rnpc3	99	63.953	Astyanax_mexicanus
ENSPKIG00000008828	rnpc3	95	51.874	ENSBTAG00000019091	RNPC3	95	53.082	Bos_taurus
ENSPKIG00000008828	rnpc3	95	52.642	ENSCJAG00000035686	RNPC3	94	52.515	Callithrix_jacchus
ENSPKIG00000008828	rnpc3	95	51.772	ENSCAFG00000019972	RNPC3	95	52.157	Canis_familiaris
ENSPKIG00000008828	rnpc3	95	51.772	ENSCAFG00020011300	RNPC3	95	52.157	Canis_lupus_dingo
ENSPKIG00000008828	rnpc3	95	52.535	ENSCHIG00000020361	RNPC3	95	53.254	Capra_hircus
ENSPKIG00000008828	rnpc3	95	53.768	ENSTSYG00000030256	RNPC3	95	53.280	Carlito_syrichta
ENSPKIG00000008828	rnpc3	84	46.911	ENSCAPG00000013600	RNPC3	97	45.270	Cavia_aperea
ENSPKIG00000008828	rnpc3	95	52.456	ENSCPOG00000031638	RNPC3	95	53.479	Cavia_porcellus
ENSPKIG00000008828	rnpc3	95	51.468	ENSCCAG00000024301	RNPC3	95	52.988	Cebus_capucinus
ENSPKIG00000008828	rnpc3	95	51.859	ENSCATG00000002086	RNPC3	94	53.386	Cercocebus_atys
ENSPKIG00000008828	rnpc3	95	53.768	ENSCLAG00000005169	RNPC3	95	52.684	Chinchilla_lanigera
ENSPKIG00000008828	rnpc3	95	51.859	ENSCSAG00000001519	RNPC3	94	53.386	Chlorocebus_sabaeus
ENSPKIG00000008828	rnpc3	99	54.721	ENSCPBG00000028311	RNPC3	98	57.225	Chrysemys_picta_bellii
ENSPKIG00000008828	rnpc3	94	34.756	ENSCSAVG00000002800	-	77	53.383	Ciona_savignyi
ENSPKIG00000008828	rnpc3	95	51.859	ENSCANG00000031444	RNPC3	94	53.386	Colobus_angolensis_palliatus
ENSPKIG00000008828	rnpc3	95	50.198	ENSCGRG00001019276	Rnpc3	96	53.082	Cricetulus_griseus_chok1gshd
ENSPKIG00000008828	rnpc3	87	48.817	ENSCGRG00000000053	Rnpc3	100	51.515	Cricetulus_griseus_crigri
ENSPKIG00000008828	rnpc3	97	59.519	ENSCSEG00000013475	rnpc3	97	63.126	Cynoglossus_semilaevis
ENSPKIG00000008828	rnpc3	99	63.636	ENSCVAG00000002645	rnpc3	99	64.202	Cyprinodon_variegatus
ENSPKIG00000008828	rnpc3	99	64.902	ENSDARG00000011247	rnpc3	99	64.625	Danio_rerio
ENSPKIG00000008828	rnpc3	95	52.008	ENSDNOG00000047498	-	95	52.745	Dasypus_novemcinctus
ENSPKIG00000008828	rnpc3	95	51.606	ENSDNOG00000044555	-	95	52.353	Dasypus_novemcinctus
ENSPKIG00000008828	rnpc3	95	51.383	ENSDORG00000027343	Rnpc3	94	52.800	Dipodomys_ordii
ENSPKIG00000008828	rnpc3	96	52.335	ENSEBUG00000002068	rnpc3	97	50.391	Eptatretus_burgeri
ENSPKIG00000008828	rnpc3	95	52.259	ENSEASG00005015957	RNPC3	94	53.252	Equus_asinus_asinus
ENSPKIG00000008828	rnpc3	95	52.756	ENSECAG00000021148	RNPC3	94	53.564	Equus_caballus
ENSPKIG00000008828	rnpc3	99	69.290	ENSELUG00000002264	rnpc3	99	67.692	Esox_lucius
ENSPKIG00000008828	rnpc3	95	52.250	ENSFCAG00000024312	RNPC3	94	54.065	Felis_catus
ENSPKIG00000008828	rnpc3	87	54.911	ENSFALG00000002580	RNPC3	98	56.473	Ficedula_albicollis
ENSPKIG00000008828	rnpc3	95	51.581	ENSFDAG00000019948	RNPC3	94	52.684	Fukomys_damarensis
ENSPKIG00000008828	rnpc3	97	61.554	ENSFHEG00000020647	rnpc3	98	62.048	Fundulus_heteroclitus
ENSPKIG00000008828	rnpc3	99	62.257	ENSGMOG00000019213	rnpc3	99	60.624	Gadus_morhua
ENSPKIG00000008828	rnpc3	95	56.098	ENSGALG00000005162	RNPC3	88	55.894	Gallus_gallus
ENSPKIG00000008828	rnpc3	99	59.690	ENSGAFG00000017236	rnpc3	99	61.450	Gambusia_affinis
ENSPKIG00000008828	rnpc3	97	66.000	ENSGACG00000002048	rnpc3	97	65.278	Gasterosteus_aculeatus
ENSPKIG00000008828	rnpc3	98	56.213	ENSGAGG00000008438	RNPC3	95	58.185	Gopherus_agassizii
ENSPKIG00000008828	rnpc3	95	46.091	ENSGGOG00000026201	-	93	45.473	Gorilla_gorilla
ENSPKIG00000008828	rnpc3	80	73.913	ENSHBUG00000015966	rnpc3	82	73.913	Haplochromis_burtoni
ENSPKIG00000008828	rnpc3	95	51.423	ENSHGLG00000001708	RNPC3	94	52.846	Heterocephalus_glaber_female
ENSPKIG00000008828	rnpc3	95	51.423	ENSHGLG00100003005	RNPC3	94	52.846	Heterocephalus_glaber_male
ENSPKIG00000008828	rnpc3	97	63.454	ENSHCOG00000017135	rnpc3	98	66.197	Hippocampus_comes
ENSPKIG00000008828	rnpc3	97	65.657	ENSIPUG00000002916	rnpc3	97	64.683	Ictalurus_punctatus
ENSPKIG00000008828	rnpc3	95	51.569	ENSSTOG00000025020	RNPC3	94	53.049	Ictidomys_tridecemlineatus
ENSPKIG00000008828	rnpc3	94	50.803	ENSJJAG00000010203	Rnpc3	96	52.000	Jaculus_jaculus
ENSPKIG00000008828	rnpc3	98	64.683	ENSKMAG00000017358	rnpc3	99	65.209	Kryptolebias_marmoratus
ENSPKIG00000008828	rnpc3	99	64.717	ENSLBEG00000024901	rnpc3	95	65.663	Labrus_bergylta
ENSPKIG00000008828	rnpc3	99	62.062	ENSLACG00000005720	RNPC3	93	61.868	Latimeria_chalumnae
ENSPKIG00000008828	rnpc3	99	67.589	ENSLOCG00000007986	rnpc3	99	66.733	Lepisosteus_oculatus
ENSPKIG00000008828	rnpc3	95	52.323	ENSLAFG00000032342	RNPC3	96	52.988	Loxodonta_africana
ENSPKIG00000008828	rnpc3	95	39.425	ENSMFAG00000002917	-	54	47.561	Macaca_fascicularis
ENSPKIG00000008828	rnpc3	95	51.663	ENSMFAG00000002004	RNPC3	94	53.187	Macaca_fascicularis
ENSPKIG00000008828	rnpc3	95	51.468	ENSMMUG00000018039	RNPC3	94	52.988	Macaca_mulatta
ENSPKIG00000008828	rnpc3	77	50.952	ENSMMUG00000002098	-	84	50.000	Macaca_mulatta
ENSPKIG00000008828	rnpc3	95	48.728	ENSMNEG00000033950	RNPC3	94	50.199	Macaca_nemestrina
ENSPKIG00000008828	rnpc3	95	51.859	ENSMLEG00000033628	RNPC3	94	53.386	Mandrillus_leucophaeus
ENSPKIG00000008828	rnpc3	95	40.779	ENSMLEG00000034644	-	95	40.650	Mandrillus_leucophaeus
ENSPKIG00000008828	rnpc3	99	59.728	ENSMAMG00000007496	rnpc3	99	58.824	Mastacembelus_armatus
ENSPKIG00000008828	rnpc3	96	63.673	ENSMZEG00005020233	rnpc3	97	65.868	Maylandia_zebra
ENSPKIG00000008828	rnpc3	88	55.531	ENSMGAG00000006381	RNPC3	99	57.301	Meleagris_gallopavo
ENSPKIG00000008828	rnpc3	95	51.089	ENSMAUG00000001358	Rnpc3	96	53.707	Mesocricetus_auratus
ENSPKIG00000008828	rnpc3	96	53.347	ENSMICG00000029591	RNPC3	95	53.252	Microcebus_murinus
ENSPKIG00000008828	rnpc3	95	53.629	ENSMOCG00000013423	Rnpc3	94	53.971	Microtus_ochrogaster
ENSPKIG00000008828	rnpc3	99	62.231	ENSMMOG00000005309	rnpc3	99	57.957	Mola_mola
ENSPKIG00000008828	rnpc3	96	53.024	ENSMODG00000002946	RNPC3	95	54.032	Monodelphis_domestica
ENSPKIG00000008828	rnpc3	98	60.119	ENSMALG00000015471	rnpc3	99	59.921	Monopterus_albus
ENSPKIG00000008828	rnpc3	95	50.394	MGP_CAROLIEiJ_G0025555	Rnpc3	96	52.590	Mus_caroli
ENSPKIG00000008828	rnpc3	95	50.392	ENSMUSG00000027981	Rnpc3	99	52.321	Mus_musculus
ENSPKIG00000008828	rnpc3	95	50.294	MGP_PahariEiJ_G0027001	Rnpc3	95	53.455	Mus_pahari
ENSPKIG00000008828	rnpc3	95	50.588	MGP_SPRETEiJ_G0026505	Rnpc3	95	53.924	Mus_spretus
ENSPKIG00000008828	rnpc3	95	52.559	ENSMPUG00000007349	RNPC3	95	53.600	Mustela_putorius_furo
ENSPKIG00000008828	rnpc3	95	53.347	ENSMLUG00000028743	RNPC3	94	53.333	Myotis_lucifugus
ENSPKIG00000008828	rnpc3	95	51.373	ENSNGAG00000010939	Rnpc3	94	52.846	Nannospalax_galili
ENSPKIG00000008828	rnpc3	99	63.086	ENSNBRG00000012196	rnpc3	97	65.234	Neolamprologus_brichardi
ENSPKIG00000008828	rnpc3	95	51.663	ENSNLEG00000012013	RNPC3	95	53.187	Nomascus_leucogenys
ENSPKIG00000008828	rnpc3	95	52.087	ENSODEG00000007612	RNPC3	95	53.200	Octodon_degus
ENSPKIG00000008828	rnpc3	99	62.597	ENSONIG00000004770	rnpc3	100	65.497	Oreochromis_niloticus
ENSPKIG00000008828	rnpc3	89	58.621	ENSOANG00000008220	RNPC3	98	58.134	Ornithorhynchus_anatinus
ENSPKIG00000008828	rnpc3	95	53.252	ENSOCUG00000004016	RNPC3	96	52.055	Oryctolagus_cuniculus
ENSPKIG00000008828	rnpc3	98	64.158	ENSORLG00000005694	rnpc3	99	63.889	Oryzias_latipes
ENSPKIG00000008828	rnpc3	99	63.922	ENSORLG00020005513	rnpc3	99	64.047	Oryzias_latipes_hni
ENSPKIG00000008828	rnpc3	98	64.554	ENSORLG00015002179	rnpc3	99	64.286	Oryzias_latipes_hsok
ENSPKIG00000008828	rnpc3	98	64.625	ENSOMEG00000017737	rnpc3	99	64.497	Oryzias_melastigma
ENSPKIG00000008828	rnpc3	95	53.360	ENSOGAG00000026182	RNPC3	95	53.200	Otolemur_garnettii
ENSPKIG00000008828	rnpc3	95	52.535	ENSOARG00000018719	RNPC3	95	53.254	Ovis_aries
ENSPKIG00000008828	rnpc3	95	51.267	ENSPPAG00000037459	RNPC3	95	53.280	Pan_paniscus
ENSPKIG00000008828	rnpc3	95	47.325	ENSPPAG00000030278	-	96	46.341	Pan_paniscus
ENSPKIG00000008828	rnpc3	95	52.250	ENSPPRG00000020246	RNPC3	95	53.571	Panthera_pardus
ENSPKIG00000008828	rnpc3	95	52.250	ENSPTIG00000009887	RNPC3	97	53.571	Panthera_tigris_altaica
ENSPKIG00000008828	rnpc3	95	51.663	ENSPTRG00000033902	RNPC3	95	53.187	Pan_troglodytes
ENSPKIG00000008828	rnpc3	94	46.985	ENSPTRG00000044227	-	96	45.325	Pan_troglodytes
ENSPKIG00000008828	rnpc3	95	43.205	ENSPANG00000029957	-	52	47.154	Papio_anubis
ENSPKIG00000008828	rnpc3	95	52.055	ENSPANG00000012137	RNPC3	94	53.586	Papio_anubis
ENSPKIG00000008828	rnpc3	65	52.663	ENSPSIG00000007396	RNPC3	99	54.438	Pelodiscus_sinensis
ENSPKIG00000008828	rnpc3	97	59.759	ENSPMGG00000011742	rnpc3	98	60.000	Periophthalmus_magnuspinnatus
ENSPKIG00000008828	rnpc3	87	49.247	ENSPEMG00000020112	Rnpc3	100	52.026	Peromyscus_maniculatus_bairdii
ENSPKIG00000008828	rnpc3	95	41.887	ENSPMAG00000003778	rnpc3	96	45.543	Petromyzon_marinus
ENSPKIG00000008828	rnpc3	96	52.621	ENSPCIG00000004415	-	95	53.722	Phascolarctos_cinereus
ENSPKIG00000008828	rnpc3	98	61.569	ENSPFOG00000009895	rnpc3	99	64.356	Poecilia_formosa
ENSPKIG00000008828	rnpc3	98	61.961	ENSPLAG00000012023	rnpc3	99	64.567	Poecilia_latipinna
ENSPKIG00000008828	rnpc3	98	61.569	ENSPMEG00000003663	rnpc3	99	64.554	Poecilia_mexicana
ENSPKIG00000008828	rnpc3	98	61.144	ENSPREG00000010206	rnpc3	98	64.343	Poecilia_reticulata
ENSPKIG00000008828	rnpc3	80	47.356	ENSPPYG00000001102	RNPC3	94	49.057	Pongo_abelii
ENSPKIG00000008828	rnpc3	97	63.800	ENSPNYG00000020603	rnpc3	98	66.000	Pundamilia_nyererei
ENSPKIG00000008828	rnpc3	95	54.175	ENSRNOG00000017310	Rnpc3	94	51.837	Rattus_norvegicus
ENSPKIG00000008828	rnpc3	95	47.368	ENSRBIG00000043897	RNPC3	94	49.105	Rhinopithecus_bieti
ENSPKIG00000008828	rnpc3	95	51.859	ENSRROG00000032334	RNPC3	94	53.386	Rhinopithecus_roxellana
ENSPKIG00000008828	rnpc3	95	51.663	ENSSBOG00000024473	RNPC3	95	53.187	Saimiri_boliviensis_boliviensis
ENSPKIG00000008828	rnpc3	96	54.032	ENSSHAG00000011859	RNPC3	95	53.024	Sarcophilus_harrisii
ENSPKIG00000008828	rnpc3	99	72.904	ENSSFOG00015013055	rnpc3	99	73.239	Scleropages_formosus
ENSPKIG00000008828	rnpc3	99	62.016	ENSSMAG00000020346	rnpc3	99	61.240	Scophthalmus_maximus
ENSPKIG00000008828	rnpc3	99	64.202	ENSSDUG00000006600	rnpc3	99	66.342	Seriola_dumerili
ENSPKIG00000008828	rnpc3	99	64.202	ENSSLDG00000007979	rnpc3	99	66.342	Seriola_lalandi_dorsalis
ENSPKIG00000008828	rnpc3	95	54.397	ENSSPUG00000003872	-	90	54.098	Sphenodon_punctatus
ENSPKIG00000008828	rnpc3	96	54.819	ENSSPUG00000008539	-	95	55.888	Sphenodon_punctatus
ENSPKIG00000008828	rnpc3	98	66.468	ENSSPAG00000005633	rnpc3	99	65.873	Stegastes_partitus
ENSPKIG00000008828	rnpc3	95	54.192	ENSSSCG00000037254	RNPC3	94	54.032	Sus_scrofa
ENSPKIG00000008828	rnpc3	87	55.481	ENSTGUG00000004795	-	98	57.366	Taeniopygia_guttata
ENSPKIG00000008828	rnpc3	99	61.417	ENSTNIG00000018963	rnpc3	99	64.961	Tetraodon_nigroviridis
ENSPKIG00000008828	rnpc3	95	51.969	ENSUMAG00000007775	RNPC3	97	53.200	Ursus_maritimus
ENSPKIG00000008828	rnpc3	95	51.772	ENSVVUG00000000331	RNPC3	95	52.157	Vulpes_vulpes
ENSPKIG00000008828	rnpc3	97	45.489	ENSXETG00000025027	rnpc3	97	44.554	Xenopus_tropicalis
ENSPKIG00000008828	rnpc3	99	62.476	ENSXCOG00000005013	rnpc3	99	61.047	Xiphophorus_couchianus
ENSPKIG00000008828	rnpc3	99	60.271	ENSXMAG00000006495	rnpc3	99	61.641	Xiphophorus_maculatus