EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000008954 (Gene tree)
Gene ID: 111843505
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 10542 bases
Position: chrPGUA01000126.1:1697796-1708337
Accession: 111843505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000026535	HRDC	PF00570.23	8.6e-14	1	1
ENSPKIP00000026501	HRDC	PF00570.23	8.9e-14	1	1
ENSPKIP00000026535	BDHCT	PF08072.11	6.9e-17	1	1
ENSPKIP00000026501	BDHCT	PF08072.11	7e-17	1	1
ENSPKIP00000026535	DEAD	PF00270.29	1.2e-18	1	1
ENSPKIP00000026501	DEAD	PF00270.29	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000007257	-	4541	XM_023811145	ENSPKIP00000026501	1442 (aa)	XP_023666913	UPI000CD65D58
ENSPKIT00000007293	-	4454	XM_023811146	ENSPKIP00000026535	1413 (aa)	XP_023666914	UPI000CD623D9

Gene Model

Click here to download ENSPKIG00000008954's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03440	Homologous recombination	KEGG
pki03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000008954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000008954	blm	99	56.250	ENSAPOG00000017966	blm	89	73.641	Acanthochromis_polyacanthus
ENSPKIG00000008954	blm	71	64.038	ENSAMEG00000013843	BLM	88	63.282	Ailuropoda_melanoleuca
ENSPKIG00000008954	blm	99	55.806	ENSACIG00000023762	blm	99	56.139	Amphilophus_citrinellus
ENSPKIG00000008954	blm	99	55.425	ENSAOCG00000003318	blm	99	55.838	Amphiprion_ocellaris
ENSPKIG00000008954	blm	99	55.759	ENSAPEG00000018105	blm	99	56.035	Amphiprion_percula
ENSPKIG00000008954	blm	99	56.424	ENSATEG00000006421	blm	100	56.356	Anabas_testudineus
ENSPKIG00000008954	blm	82	51.855	ENSAPLG00000006878	BLM	98	51.400	Anas_platyrhynchos
ENSPKIG00000008954	blm	76	55.023	ENSACAG00000014275	BLM	56	65.180	Anolis_carolinensis
ENSPKIG00000008954	blm	65	63.432	ENSANAG00000038415	BLM	87	69.118	Aotus_nancymaae
ENSPKIG00000008954	blm	99	55.318	ENSACLG00000020354	blm	99	55.170	Astatotilapia_calliptera
ENSPKIG00000008954	blm	100	57.064	ENSAMXG00000016970	blm	100	57.367	Astyanax_mexicanus
ENSPKIG00000008954	blm	79	71.560	ENSBTAG00000020301	BLM	86	71.560	Bos_taurus
ENSPKIG00000008954	blm	59	63.830	ENSCJAG00000009803	BLM	87	69.174	Callithrix_jacchus
ENSPKIG00000008954	blm	76	62.632	ENSCAFG00000012385	BLM	88	62.441	Canis_familiaris
ENSPKIG00000008954	blm	76	62.632	ENSCAFG00020016111	BLM	91	65.714	Canis_lupus_dingo
ENSPKIG00000008954	blm	80	71.560	ENSCHIG00000010329	BLM	87	71.560	Capra_hircus
ENSPKIG00000008954	blm	67	63.593	ENSTSYG00000012368	BLM	87	68.921	Carlito_syrichta
ENSPKIG00000008954	blm	60	72.203	ENSCAPG00000017976	BLM	69	72.203	Cavia_aperea
ENSPKIG00000008954	blm	86	63.571	ENSCPOG00000001761	BLM	88	63.507	Cavia_porcellus
ENSPKIG00000008954	blm	65	63.948	ENSCCAG00000023069	BLM	87	69.358	Cebus_capucinus
ENSPKIG00000008954	blm	72	63.389	ENSCATG00000040609	BLM	90	69.337	Cercocebus_atys
ENSPKIG00000008954	blm	86	63.507	ENSCSAG00000017040	BLM	88	63.270	Chlorocebus_sabaeus
ENSPKIG00000008954	blm	59	53.933	ENSCHOG00000006255	BLM	81	53.933	Choloepus_hoffmanni
ENSPKIG00000008954	blm	76	55.394	ENSCPBG00000025000	BLM	97	52.506	Chrysemys_picta_bellii
ENSPKIG00000008954	blm	53	56.889	ENSCANG00000034808	BLM	86	50.146	Colobus_angolensis_palliatus
ENSPKIG00000008954	blm	66	63.550	ENSCGRG00001024897	Blm	88	63.251	Cricetulus_griseus_chok1gshd
ENSPKIG00000008954	blm	81	70.858	ENSCSEG00000013483	blm	87	70.975	Cynoglossus_semilaevis
ENSPKIG00000008954	blm	62	62.162	ENSCVAG00000017583	blm	71	83.871	Cyprinodon_variegatus
ENSPKIG00000008954	blm	99	57.172	ENSDARG00000077089	blm	100	57.221	Danio_rerio
ENSPKIG00000008954	blm	70	62.130	ENSDNOG00000010159	BLM	87	62.500	Dasypus_novemcinctus
ENSPKIG00000008954	blm	59	63.239	ENSDORG00000011033	Blm	81	63.775	Dipodomys_ordii
ENSPKIG00000008954	blm	56	57.143	ENSETEG00000015019	BLM	61	57.143	Echinops_telfairi
ENSPKIG00000008954	blm	73	60.071	ENSEASG00005006727	BLM	88	59.929	Equus_asinus_asinus
ENSPKIG00000008954	blm	73	63.550	ENSECAG00000011405	BLM	87	63.475	Equus_caballus
ENSPKIG00000008954	blm	62	62.515	ENSEEUG00000001434	BLM	61	61.754	Erinaceus_europaeus
ENSPKIG00000008954	blm	99	57.029	ENSELUG00000019098	blm	99	56.839	Esox_lucius
ENSPKIG00000008954	blm	72	63.133	ENSFCAG00000006087	BLM	87	69.485	Felis_catus
ENSPKIG00000008954	blm	61	62.171	ENSFALG00000010981	BLM	75	64.338	Ficedula_albicollis
ENSPKIG00000008954	blm	81	65.625	ENSFDAG00000012658	BLM	87	65.625	Fukomys_damarensis
ENSPKIG00000008954	blm	99	54.847	ENSFHEG00000002553	blm	99	54.736	Fundulus_heteroclitus
ENSPKIG00000008954	blm	99	53.014	ENSGMOG00000016431	blm	90	70.603	Gadus_morhua
ENSPKIG00000008954	blm	100	55.305	ENSGACG00000010863	blm	99	82.700	Gasterosteus_aculeatus
ENSPKIG00000008954	blm	65	57.173	ENSGAGG00000005383	BLM	85	70.795	Gopherus_agassizii
ENSPKIG00000008954	blm	63	63.626	ENSGGOG00000007710	BLM	90	69.061	Gorilla_gorilla
ENSPKIG00000008954	blm	87	73.634	ENSHBUG00000015943	blm	99	55.646	Haplochromis_burtoni
ENSPKIG00000008954	blm	62	63.170	ENSHGLG00000013231	BLM	87	63.183	Heterocephalus_glaber_female
ENSPKIG00000008954	blm	65	67.865	ENSHCOG00000011455	blm	89	69.494	Hippocampus_comes
ENSPKIG00000008954	blm	66	70.764	ENSIPUG00000000529	blm	76	72.899	Ictalurus_punctatus
ENSPKIG00000008954	blm	59	62.911	ENSSTOG00000005000	BLM	88	62.471	Ictidomys_tridecemlineatus
ENSPKIG00000008954	blm	59	57.075	ENSJJAG00000016322	Blm	79	57.025	Jaculus_jaculus
ENSPKIG00000008954	blm	61	73.702	ENSKMAG00000016608	blm	60	73.796	Kryptolebias_marmoratus
ENSPKIG00000008954	blm	73	66.276	ENSLACG00000006490	BLM	96	66.121	Latimeria_chalumnae
ENSPKIG00000008954	blm	99	53.903	ENSLOCG00000014302	blm	91	71.084	Lepisosteus_oculatus
ENSPKIG00000008954	blm	86	63.389	ENSMFAG00000042982	BLM	90	69.337	Macaca_fascicularis
ENSPKIG00000008954	blm	86	63.389	ENSMMUG00000019526	BLM	90	69.337	Macaca_mulatta
ENSPKIG00000008954	blm	59	63.152	ENSMNEG00000031251	BLM	90	69.061	Macaca_nemestrina
ENSPKIG00000008954	blm	72	59.668	ENSMLEG00000032934	BLM	88	59.431	Mandrillus_leucophaeus
ENSPKIG00000008954	blm	59	73.759	ENSMAMG00000008726	blm	61	74.026	Mastacembelus_armatus
ENSPKIG00000008954	blm	99	55.131	ENSMZEG00005022323	blm	99	55.630	Maylandia_zebra
ENSPKIG00000008954	blm	66	62.871	ENSMAUG00000008953	Blm	67	62.574	Mesocricetus_auratus
ENSPKIG00000008954	blm	65	63.282	ENSMICG00000034442	BLM	87	68.864	Microcebus_murinus
ENSPKIG00000008954	blm	72	64.124	ENSMOCG00000016367	Blm	88	64.124	Microtus_ochrogaster
ENSPKIG00000008954	blm	99	55.318	ENSMMOG00000006959	blm	89	72.877	Mola_mola
ENSPKIG00000008954	blm	99	56.181	ENSMALG00000007323	blm	99	56.172	Monopterus_albus
ENSPKIG00000008954	blm	66	62.633	MGP_CAROLIEiJ_G0029907	Blm	78	62.500	Mus_caroli
ENSPKIG00000008954	blm	86	62.500	ENSMUSG00000030528	Blm	88	62.280	Mus_musculus
ENSPKIG00000008954	blm	76	62.989	MGP_PahariEiJ_G0013129	Blm	88	62.752	Mus_pahari
ENSPKIG00000008954	blm	66	62.588	MGP_SPRETEiJ_G0031009	Blm	67	62.559	Mus_spretus
ENSPKIG00000008954	blm	69	69.622	ENSMPUG00000015657	BLM	83	69.622	Mustela_putorius_furo
ENSPKIG00000008954	blm	67	62.867	ENSMLUG00000014697	BLM	89	62.750	Myotis_lucifugus
ENSPKIG00000008954	blm	70	62.648	ENSNGAG00000001275	Blm	73	62.411	Nannospalax_galili
ENSPKIG00000008954	blm	88	73.040	ENSNBRG00000019702	blm	99	54.630	Neolamprologus_brichardi
ENSPKIG00000008954	blm	65	60.900	ENSNLEG00000012087	BLM	87	65.688	Nomascus_leucogenys
ENSPKIG00000008954	blm	87	58.333	ENSMEUG00000007253	BLM	90	58.164	Notamacropus_eugenii
ENSPKIG00000008954	blm	59	65.714	ENSOPRG00000011667	BLM	80	65.442	Ochotona_princeps
ENSPKIG00000008954	blm	59	59.689	ENSODEG00000015373	BLM	80	59.524	Octodon_degus
ENSPKIG00000008954	blm	87	71.694	ENSONIG00000015193	blm	89	71.857	Oreochromis_niloticus
ENSPKIG00000008954	blm	54	66.839	ENSOANG00000009316	-	100	66.710	Ornithorhynchus_anatinus
ENSPKIG00000008954	blm	59	62.280	ENSOCUG00000013969	BLM	59	61.827	Oryctolagus_cuniculus
ENSPKIG00000008954	blm	99	56.042	ENSORLG00000008110	blm	89	73.964	Oryzias_latipes
ENSPKIG00000008954	blm	99	56.280	ENSORLG00020004812	blm	99	56.280	Oryzias_latipes_hni
ENSPKIG00000008954	blm	99	55.994	ENSORLG00015018640	blm	89	69.941	Oryzias_latipes_hsok
ENSPKIG00000008954	blm	99	54.264	ENSOMEG00000023545	blm	89	73.609	Oryzias_melastigma
ENSPKIG00000008954	blm	86	62.559	ENSOGAG00000005708	BLM	88	62.708	Otolemur_garnettii
ENSPKIG00000008954	blm	67	63.059	ENSOARG00000012875	BLM	88	62.824	Ovis_aries
ENSPKIG00000008954	blm	62	63.389	ENSPPAG00000032173	BLM	87	69.358	Pan_paniscus
ENSPKIG00000008954	blm	72	63.015	ENSPPRG00000002471	BLM	87	69.301	Panthera_pardus
ENSPKIG00000008954	blm	72	62.662	ENSPTIG00000016168	BLM	87	69.287	Panthera_tigris_altaica
ENSPKIG00000008954	blm	62	62.915	ENSPTRG00000007460	BLM	87	68.991	Pan_troglodytes
ENSPKIG00000008954	blm	86	63.389	ENSPANG00000018572	BLM	90	69.337	Papio_anubis
ENSPKIG00000008954	blm	55	70.935	ENSPMGG00000006629	blm	82	71.318	Periophthalmus_magnuspinnatus
ENSPKIG00000008954	blm	86	63.938	ENSPEMG00000017348	Blm	88	63.820	Peromyscus_maniculatus_bairdii
ENSPKIG00000008954	blm	80	52.357	ENSPCIG00000006609	BLM	88	62.295	Phascolarctos_cinereus
ENSPKIG00000008954	blm	87	71.395	ENSPLAG00000017344	blm	89	71.834	Poecilia_latipinna
ENSPKIG00000008954	blm	87	71.429	ENSPREG00000007715	blm	99	55.163	Poecilia_reticulata
ENSPKIG00000008954	blm	70	62.322	ENSPPYG00000006784	BLM	88	62.175	Pongo_abelii
ENSPKIG00000008954	blm	58	61.702	ENSPCAG00000008960	BLM	59	61.401	Procavia_capensis
ENSPKIG00000008954	blm	99	41.667	ENSPCOG00000000439	BLM	81	59.343	Propithecus_coquereli
ENSPKIG00000008954	blm	76	78.738	ENSPVAG00000011642	BLM	69	78.738	Pteropus_vampyrus
ENSPKIG00000008954	blm	92	71.777	ENSPNYG00000010956	blm	95	72.174	Pundamilia_nyererei
ENSPKIG00000008954	blm	99	57.231	ENSPNAG00000011714	blm	99	57.561	Pygocentrus_nattereri
ENSPKIG00000008954	blm	86	63.002	ENSRNOG00000011213	Blm	88	62.884	Rattus_norvegicus
ENSPKIG00000008954	blm	65	62.338	ENSRBIG00000029656	BLM	90	67.945	Rhinopithecus_bieti
ENSPKIG00000008954	blm	70	62.338	ENSRROG00000037871	BLM	90	67.945	Rhinopithecus_roxellana
ENSPKIG00000008954	blm	54	69.174	ENSSBOG00000030957	BLM	87	69.174	Saimiri_boliviensis_boliviensis
ENSPKIG00000008954	blm	86	51.051	ENSSHAG00000007988	BLM	89	62.073	Sarcophilus_harrisii
ENSPKIG00000008954	blm	81	71.593	ENSSFOG00015015462	blm	87	75.976	Scleropages_formosus
ENSPKIG00000008954	blm	88	73.018	ENSSMAG00000001120	blm	89	73.467	Scophthalmus_maximus
ENSPKIG00000008954	blm	88	72.556	ENSSDUG00000010955	blm	89	73.027	Seriola_dumerili
ENSPKIG00000008954	blm	87	72.491	ENSSLDG00000000634	blm	99	55.389	Seriola_lalandi_dorsalis
ENSPKIG00000008954	blm	59	58.137	ENSSARG00000006398	BLM	63	57.901	Sorex_araneus
ENSPKIG00000008954	blm	60	59.293	ENSSPUG00000000013	BLM	74	60.071	Sphenodon_punctatus
ENSPKIG00000008954	blm	59	73.460	ENSSPAG00000013999	blm	59	74.289	Stegastes_partitus
ENSPKIG00000008954	blm	68	63.604	ENSSSCG00000001816	BLM	89	66.323	Sus_scrofa
ENSPKIG00000008954	blm	84	60.888	ENSTRUG00000019860	blm	61	72.491	Takifugu_rubripes
ENSPKIG00000008954	blm	55	66.539	ENSTTRG00000016386	BLM	84	66.033	Tursiops_truncatus
ENSPKIG00000008954	blm	72	63.938	ENSUMAG00000009105	BLM	94	69.693	Ursus_maritimus
ENSPKIG00000008954	blm	69	65.000	ENSVPAG00000000085	BLM	88	59.647	Vicugna_pacos
ENSPKIG00000008954	blm	68	70.776	ENSVVUG00000006402	BLM	86	70.776	Vulpes_vulpes
ENSPKIG00000008954	blm	99	46.711	ENSXETG00000007847	blm	88	66.962	Xenopus_tropicalis