EuRBPDB

Description
Ensembl ID
ENSPKIG00000009459 (Gene tree)
Gene ID
111853931
Gene Symbol
csde1
Alias
-
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
16079 bases
Position
chrPGUA01000264.1:305777-321855
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSPKIP00000027395CSDPF00313.221.1e-8115
ENSPKIP00000027395CSDPF00313.221.1e-8125
ENSPKIP00000027395CSDPF00313.221.1e-8135
ENSPKIP00000027395CSDPF00313.221.1e-8145
ENSPKIP00000027395CSDPF00313.221.1e-8155
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSPKIT00000008162-2283-ENSPKIP00000027395760 (aa)--
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSPKIG00000009459csde110077.113ENSG00000009307CSDE110083.824Homo_sapiens
ENSPKIG00000009459csde110086.719ENSAPOG00000015538csde110086.719Acanthochromis_polyacanthus
ENSPKIG00000009459csde110076.463ENSAMEG00000017129CSDE19476.463Ailuropoda_melanoleuca
ENSPKIG00000009459csde18683.514ENSACIG00000015175csde110083.514Amphilophus_citrinellus
ENSPKIG00000009459csde110086.849ENSAOCG00000011510csde110086.849Amphiprion_ocellaris
ENSPKIG00000009459csde110086.849ENSAPEG00000007194csde110086.849Amphiprion_percula
ENSPKIG00000009459csde110085.566ENSATEG00000003864csde110085.566Anabas_testudineus
ENSPKIG00000009459csde110078.255ENSAPLG00000008797CSDE110078.255Anas_platyrhynchos
ENSPKIG00000009459csde110075.845ENSACAG00000003120CSDE110075.845Anolis_carolinensis
ENSPKIG00000009459csde19059.717ENSANAG00000028396-9059.717Aotus_nancymaae
ENSPKIG00000009459csde110076.983ENSANAG00000024665CSDE19578.621Aotus_nancymaae
ENSPKIG00000009459csde110084.785ENSACLG00000013296csde110084.785Astatotilapia_calliptera
ENSPKIG00000009459csde110085.065ENSAMXG00000007436csde110085.065Astyanax_mexicanus
ENSPKIG00000009459csde110076.723ENSBTAG00000000678CSDE110076.723Bos_taurus
ENSPKIG00000009459csde110076.983ENSCJAG00000012565CSDE19476.983Callithrix_jacchus
ENSPKIG00000009459csde19877.556ENSCAFG00000009618CSDE19477.556Canis_familiaris
ENSPKIG00000009459csde110077.373ENSCAFG00020000481CSDE110077.373Canis_lupus_dingo
ENSPKIG00000009459csde110076.723ENSCHIG00000017250CSDE110076.723Capra_hircus
ENSPKIG00000009459csde110076.983ENSTSYG00000003747CSDE110076.983Carlito_syrichta
ENSPKIG00000009459csde110053.266ENSCAPG00000015128CSDE110053.266Cavia_aperea
ENSPKIG00000009459csde110071.934ENSCPOG00000040388CSDE110071.934Cavia_porcellus
ENSPKIG00000009459csde19655.134ENSCCAG00000030878-9155.134Cebus_capucinus
ENSPKIG00000009459csde19557.245ENSCCAG00000033677-9957.245Cebus_capucinus
ENSPKIG00000009459csde110076.983ENSCCAG00000036794CSDE110074.388Cebus_capucinus
ENSPKIG00000009459csde110077.113ENSCATG00000036962CSDE19777.113Cercocebus_atys
ENSPKIG00000009459csde110077.503ENSCLAG00000006618CSDE110077.503Chinchilla_lanigera
ENSPKIG00000009459csde110074.125ENSCSAG00000001658CSDE19574.125Chlorocebus_sabaeus
ENSPKIG00000009459csde110073.707ENSCHOG00000000918CSDE19473.707Choloepus_hoffmanni
ENSPKIG00000009459csde110078.646ENSCPBG00000016547CSDE110078.646Chrysemys_picta_bellii
ENSPKIG00000009459csde19942.220ENSCING00000014465-9742.220Ciona_intestinalis
ENSPKIG00000009459csde19741.055ENSCSAVG00000008100-9940.854Ciona_savignyi
ENSPKIG00000009459csde17779.182ENSCANG00000031069-9479.182Colobus_angolensis_palliatus
ENSPKIG00000009459csde110077.113ENSCANG00000035096CSDE19777.113Colobus_angolensis_palliatus
ENSPKIG00000009459csde110076.723ENSCGRG00001016833-10076.723Cricetulus_griseus_chok1gshd
ENSPKIG00000009459csde110062.809ENSCGRG00001014011-10062.809Cricetulus_griseus_chok1gshd
ENSPKIG00000009459csde19773.942ENSCGRG00000002225-10073.942Cricetulus_griseus_crigri
ENSPKIG00000009459csde110073.043ENSCGRG00000005831-10073.043Cricetulus_griseus_crigri
ENSPKIG00000009459csde110084.005ENSCSEG00000002620csde110084.005Cynoglossus_semilaevis
ENSPKIG00000009459csde110085.306ENSCVAG00000001344csde110085.306Cyprinodon_variegatus
ENSPKIG00000009459csde110083.459ENSDARG00000074758csde110083.820Danio_rerio
ENSPKIG00000009459csde16351.773ENSDNOG00000034464-9951.773Dasypus_novemcinctus
ENSPKIG00000009459csde110077.273ENSDNOG00000010287-9377.273Dasypus_novemcinctus
ENSPKIG00000009459csde110073.625ENSDORG00000011609Csde110075.821Dipodomys_ordii
ENSPKIG00000009459csde19646.939FBgn0263352Unr7846.535Drosophila_melanogaster
ENSPKIG00000009459csde19959.530ENSETEG00000013678-9959.530Echinops_telfairi
ENSPKIG00000009459csde19478.049ENSETEG00000002491-7478.049Echinops_telfairi
ENSPKIG00000009459csde19068.088ENSETEG00000006280-9968.088Echinops_telfairi
ENSPKIG00000009459csde17953.465ENSETEG00000007109-9953.465Echinops_telfairi
ENSPKIG00000009459csde19953.571ENSEBUG00000008647csde19951.909Eptatretus_burgeri
ENSPKIG00000009459csde110077.503ENSEASG00005006284CSDE110074.500Equus_asinus_asinus
ENSPKIG00000009459csde110077.503ENSECAG00000020885CSDE19977.451Equus_caballus
ENSPKIG00000009459csde19380.062ENSEEUG00000006286CSDE16880.062Erinaceus_europaeus
ENSPKIG00000009459csde110084.845ENSELUG00000015507csde110084.845Esox_lucius
ENSPKIG00000009459csde110077.373ENSFCAG00000029266CSDE110077.373Felis_catus
ENSPKIG00000009459csde110074.969ENSFALG00000003407CSDE110074.969Ficedula_albicollis
ENSPKIG00000009459csde110073.875ENSFDAG00000007882CSDE110076.119Fukomys_damarensis
ENSPKIG00000009459csde19885.430ENSFHEG00000010799csde19985.430Fundulus_heteroclitus
ENSPKIG00000009459csde19982.456ENSGMOG00000012731csde110082.456Gadus_morhua
ENSPKIG00000009459csde19875.128ENSGALG00000002139CSDE19875.128Gallus_gallus
ENSPKIG00000009459csde19484.122ENSGAFG00000005241csde19584.122Gambusia_affinis
ENSPKIG00000009459csde19982.811ENSGACG00000004544csde110082.811Gasterosteus_aculeatus
ENSPKIG00000009459csde110078.516ENSGAGG00000017685CSDE110075.469Gopherus_agassizii
ENSPKIG00000009459csde110077.113ENSGGOG00000002164CSDE110077.113Gorilla_gorilla
ENSPKIG00000009459csde110084.785ENSHBUG00000020315csde110084.785Haplochromis_burtoni
ENSPKIG00000009459csde19667.910ENSHGLG00000008555-10067.910Heterocephalus_glaber_female
ENSPKIG00000009459csde19967.414ENSHGLG00000007471-9867.414Heterocephalus_glaber_female
ENSPKIG00000009459csde19959.900ENSHGLG00000000650-9959.900Heterocephalus_glaber_female
ENSPKIG00000009459csde110069.831ENSHGLG00000003829-10069.831Heterocephalus_glaber_female
ENSPKIG00000009459csde110062.846ENSHGLG00000019549-10062.846Heterocephalus_glaber_female
ENSPKIG00000009459csde19667.038ENSHGLG00000010039-10067.038Heterocephalus_glaber_female
ENSPKIG00000009459csde110069.961ENSHGLG00000009620-10070.351Heterocephalus_glaber_female
ENSPKIG00000009459csde19364.485ENSHGLG00100004195-10064.485Heterocephalus_glaber_male
ENSPKIG00000009459csde19666.815ENSHGLG00100006910-10066.815Heterocephalus_glaber_male
ENSPKIG00000009459csde110065.410ENSHGLG00100012072-10065.410Heterocephalus_glaber_male
ENSPKIG00000009459csde19966.887ENSHGLG00100007287-9866.887Heterocephalus_glaber_male
ENSPKIG00000009459csde19963.171ENSHGLG00100002245-9963.171Heterocephalus_glaber_male
ENSPKIG00000009459csde110077.113ENSHGLG00100019438-10077.113Heterocephalus_glaber_male
ENSPKIG00000009459csde110063.199ENSHGLG00100001846-10063.199Heterocephalus_glaber_male
ENSPKIG00000009459csde19762.806ENSHGLG00100004833-10062.806Heterocephalus_glaber_male
ENSPKIG00000009459csde110084.265ENSHCOG00000004158csde110084.265Hippocampus_comes
ENSPKIG00000009459csde110084.805ENSIPUG00000000355csde110084.805Ictalurus_punctatus
ENSPKIG00000009459csde18566.806ENSSTOG00000032722-9866.806Ictidomys_tridecemlineatus
ENSPKIG00000009459csde110064.387ENSSTOG00000030994-10064.387Ictidomys_tridecemlineatus
ENSPKIG00000009459csde110073.875ENSJJAG00000019571Csde110076.119Jaculus_jaculus
ENSPKIG00000009459csde110081.920ENSKMAG00000005685csde110081.514Kryptolebias_marmoratus
ENSPKIG00000009459csde110085.956ENSLBEG00000014770csde110085.956Labrus_bergylta
ENSPKIG00000009459csde110073.333ENSLACG00000018452CSDE19473.333Latimeria_chalumnae
ENSPKIG00000009459csde110084.045ENSLOCG00000010413csde19484.045Lepisosteus_oculatus
ENSPKIG00000009459csde110076.593ENSLAFG00000007150CSDE19676.593Loxodonta_africana
ENSPKIG00000009459csde110077.113ENSMFAG00000003674CSDE110077.113Macaca_fascicularis
ENSPKIG00000009459csde110077.113ENSMMUG00000001974CSDE110077.113Macaca_mulatta
ENSPKIG00000009459csde110077.113ENSMNEG00000045247CSDE19777.113Macaca_nemestrina
ENSPKIG00000009459csde110076.853ENSMLEG00000038673CSDE19476.853Mandrillus_leucophaeus
ENSPKIG00000009459csde110086.849ENSMAMG00000008821csde110086.849Mastacembelus_armatus
ENSPKIG00000009459csde110084.785ENSMZEG00005021675csde110084.785Maylandia_zebra
ENSPKIG00000009459csde110078.153ENSMGAG00000016381CSDE110078.153Meleagris_gallopavo
ENSPKIG00000009459csde110073.750ENSMAUG00000014031Csde110075.970Mesocricetus_auratus
ENSPKIG00000009459csde110077.373ENSMICG00000002050CSDE19975.223Microcebus_murinus
ENSPKIG00000009459csde110076.853ENSMOCG00000018960Csde110076.853Microtus_ochrogaster
ENSPKIG00000009459csde110086.346ENSMMOG00000015075csde110086.346Mola_mola
ENSPKIG00000009459csde110077.951ENSMODG00000004685CSDE110075.750Monodelphis_domestica
ENSPKIG00000009459csde110086.996ENSMALG00000007132csde110086.996Monopterus_albus
ENSPKIG00000009459csde110076.853MGP_CAROLIEiJ_G0025444Csde110082.781Mus_caroli
ENSPKIG00000009459csde110076.853ENSMUSG00000068823Csde110082.781Mus_musculus
ENSPKIG00000009459csde110076.853MGP_PahariEiJ_G0026888Csde110082.781Mus_pahari
ENSPKIG00000009459csde110076.853MGP_SPRETEiJ_G0026394Csde110082.781Mus_spretus
ENSPKIG00000009459csde19874.490ENSMPUG00000005753CSDE19974.490Mustela_putorius_furo
ENSPKIG00000009459csde110076.983ENSMLUG00000005681CSDE19476.983Myotis_lucifugus
ENSPKIG00000009459csde110073.750ENSNGAG00000021929Csde110075.970Nannospalax_galili
ENSPKIG00000009459csde19655.305ENSNGAG00000012599-10055.305Nannospalax_galili
ENSPKIG00000009459csde110084.785ENSNBRG00000020808csde110084.785Neolamprologus_brichardi
ENSPKIG00000009459csde110076.983ENSNLEG00000004842CSDE19776.983Nomascus_leucogenys
ENSPKIG00000009459csde19875.830ENSMEUG00000002677CSDE19975.830Notamacropus_eugenii
ENSPKIG00000009459csde19871.287ENSOPRG00000005002CSDE18271.287Ochotona_princeps
ENSPKIG00000009459csde110073.750ENSODEG00000007383-10076.119Octodon_degus
ENSPKIG00000009459csde19652.212ENSODEG00000005979-9852.212Octodon_degus
ENSPKIG00000009459csde110079.682ENSONIG00000009309csde110079.682Oreochromis_niloticus
ENSPKIG00000009459csde110063.469ENSOANG00000003346-10063.469Ornithorhynchus_anatinus
ENSPKIG00000009459csde110076.593ENSOCUG00000016438CSDE19476.593Oryctolagus_cuniculus
ENSPKIG00000009459csde110084.245ENSORLG00000000707csde110084.245Oryzias_latipes
ENSPKIG00000009459csde110080.928ENSORLG00020005148csde110079.044Oryzias_latipes_hni
ENSPKIG00000009459csde110084.115ENSORLG00015019415csde110084.115Oryzias_latipes_hsok
ENSPKIG00000009459csde110084.115ENSOMEG00000015656csde110084.115Oryzias_melastigma
ENSPKIG00000009459csde110077.503ENSOGAG00000012127CSDE19477.503Otolemur_garnettii
ENSPKIG00000009459csde110076.853ENSOARG00000020034CSDE19476.853Ovis_aries
ENSPKIG00000009459csde110077.113ENSPPAG00000025861CSDE110077.113Pan_paniscus
ENSPKIG00000009459csde110077.373ENSPPRG00000006747CSDE19477.373Panthera_pardus
ENSPKIG00000009459csde110077.373ENSPTIG00000015468CSDE110074.375Panthera_tigris_altaica
ENSPKIG00000009459csde110077.113ENSPTRG00000033721CSDE110074.125Pan_troglodytes
ENSPKIG00000009459csde110077.113ENSPANG00000018873CSDE110077.113Papio_anubis
ENSPKIG00000009459csde19675.717ENSPSIG00000003823CSDE19675.717Pelodiscus_sinensis
ENSPKIG00000009459csde110083.615ENSPMGG00000000772csde110083.615Periophthalmus_magnuspinnatus
ENSPKIG00000009459csde110074.000ENSPEMG00000020357-10076.269Peromyscus_maniculatus_bairdii
ENSPKIG00000009459csde110075.875ENSPCIG00000022587CSDE110075.875Phascolarctos_cinereus
ENSPKIG00000009459csde19783.981ENSPFOG00000012664csde110084.603Poecilia_formosa
ENSPKIG00000009459csde19579.877ENSPLAG00000017680csde19379.877Poecilia_latipinna
ENSPKIG00000009459csde19579.877ENSPMEG00000005094csde19579.877Poecilia_mexicana
ENSPKIG00000009459csde110081.047ENSPREG00000011631csde110078.795Poecilia_reticulata
ENSPKIG00000009459csde110074.000ENSPPYG00000000996CSDE110074.000Pongo_abelii
ENSPKIG00000009459csde110074.252ENSPCAG00000014368CSDE19474.252Procavia_capensis
ENSPKIG00000009459csde110077.373ENSPCOG00000017893CSDE110077.373Propithecus_coquereli
ENSPKIG00000009459csde18769.004ENSPCOG00000008223-9269.004Propithecus_coquereli
ENSPKIG00000009459csde110071.651ENSPVAG00000008225CSDE19571.651Pteropus_vampyrus
ENSPKIG00000009459csde110084.785ENSPNYG00000013745csde110084.785Pundamilia_nyererei
ENSPKIG00000009459csde110085.844ENSPNAG00000001958csde110085.844Pygocentrus_nattereri
ENSPKIG00000009459csde110073.750ENSRNOG00000061058Csde110073.750Rattus_norvegicus
ENSPKIG00000009459csde110073.307ENSRBIG00000038966-9473.307Rhinopithecus_bieti
ENSPKIG00000009459csde110074.026ENSRBIG00000038088-10074.026Rhinopithecus_bieti
ENSPKIG00000009459csde110077.113ENSRROG00000043101CSDE19777.113Rhinopithecus_roxellana
ENSPKIG00000009459csde110076.983ENSSBOG00000035592CSDE19576.983Saimiri_boliviensis_boliviensis
ENSPKIG00000009459csde110078.804ENSSHAG00000009831CSDE110078.804Sarcophilus_harrisii
ENSPKIG00000009459csde110086.589ENSSFOG00015007498csde110086.589Scleropages_formosus
ENSPKIG00000009459csde110085.938ENSSMAG00000007203csde110085.938Scophthalmus_maximus
ENSPKIG00000009459csde110087.109ENSSDUG00000015380csde110087.109Seriola_dumerili
ENSPKIG00000009459csde110087.109ENSSLDG00000008819csde110087.109Seriola_lalandi_dorsalis
ENSPKIG00000009459csde110076.593ENSSARG00000000738CSDE19476.593Sorex_araneus
ENSPKIG00000009459csde110078.906ENSSPUG00000008714CSDE110078.906Sphenodon_punctatus
ENSPKIG00000009459csde110086.979ENSSPAG00000000716csde110086.979Stegastes_partitus
ENSPKIG00000009459csde110077.503ENSSSCG00000006752CSDE110077.503Sus_scrofa
ENSPKIG00000009459csde110074.282ENSTGUG00000000972CSDE110074.282Taeniopygia_guttata
ENSPKIG00000009459csde110080.704ENSTRUG00000007996csde110080.704Takifugu_rubripes
ENSPKIG00000009459csde19376.245ENSTNIG00000010878csde110076.245Tetraodon_nigroviridis
ENSPKIG00000009459csde19278.528ENSTBEG00000011880-6178.528Tupaia_belangeri
ENSPKIG00000009459csde110076.593ENSTTRG00000015583CSDE19476.593Tursiops_truncatus
ENSPKIG00000009459csde18773.194ENSUAMG00000024289-9973.194Ursus_americanus
ENSPKIG00000009459csde18979.167ENSUAMG00000021779-9979.167Ursus_americanus
ENSPKIG00000009459csde19773.397ENSUMAG00000011714-9973.397Ursus_maritimus
ENSPKIG00000009459csde110071.131ENSUMAG00000009720-9771.131Ursus_maritimus
ENSPKIG00000009459csde110078.605ENSVPAG00000000749CSDE17978.605Vicugna_pacos
ENSPKIG00000009459csde19372.449ENSVVUG00000009890CSDE19472.449Vulpes_vulpes
ENSPKIG00000009459csde110075.592ENSXETG00000021448csde110075.592Xenopus_tropicalis
ENSPKIG00000009459csde19471.240ENSXCOG00000000035csde19971.240Xiphophorus_couchianus
ENSPKIG00000009459csde19984.666ENSXMAG00000009080csde19984.666Xiphophorus_maculatus