EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000009607 (Gene tree)
Gene ID: 111836620
Gene Symbol: POLR2E (1 of many)
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 3398 bases
Position: chrPGUA01000058.1:1563226-1566623
Accession: 111836620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000027658	RNA_pol_Rpb5_N	PF03871.14	8e-35	1	1
ENSPKIP00000027616	RNA_pol_Rpb5_N	PF03871.14	1e-34	1	1
ENSPKIP00000027631	RNA_pol_Rpb5_N	PF03871.14	1.1e-34	1	1
ENSPKIP00000027616	RNA_pol_Rpb5_C	PF01191.19	1.1e-34	1	1
ENSPKIP00000027658	RNA_pol_Rpb5_C	PF01191.19	1.5e-30	1	1
ENSPKIP00000027631	RNA_pol_Rpb5_C	PF01191.19	8.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000008386	POLR2E (1 of many)-201	820	-	ENSPKIP00000027616	210 (aa)	XP_023653833	UPI000CD6554A
ENSPKIT00000008428	POLR2E (1 of many)-203	552	-	ENSPKIP00000027658	183 (aa)	-	-
ENSPKIT00000008401	POLR2E (1 of many)-202	839	-	ENSPKIP00000027631	222 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000009607's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03020	RNA polymerase	KEGG
pki04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000009607's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000009607	POLR2E	100	97.143	ENSPKIG00000024123	POLR2E	100	97.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000009607	POLR2E	100	94.286	ENSG00000099817	POLR2E	100	94.286	Homo_sapiens
ENSPKIG00000009607	POLR2E	100	98.571	ENSAPOG00000002935	polr2eb	100	98.571	Acanthochromis_polyacanthus
ENSPKIG00000009607	POLR2E	100	94.762	ENSAMEG00000003159	POLR2E	100	94.762	Ailuropoda_melanoleuca
ENSPKIG00000009607	POLR2E	100	97.814	ENSACIG00000024371	polr2eb	100	97.814	Amphilophus_citrinellus
ENSPKIG00000009607	POLR2E	100	98.571	ENSAOCG00000018166	polr2eb	100	98.571	Amphiprion_ocellaris
ENSPKIG00000009607	POLR2E	100	98.571	ENSAPEG00000009000	polr2eb	100	98.571	Amphiprion_percula
ENSPKIG00000009607	POLR2E	100	98.571	ENSATEG00000023760	polr2eb	100	98.571	Anabas_testudineus
ENSPKIG00000009607	POLR2E	100	94.762	ENSANAG00000038488	POLR2E	100	94.762	Aotus_nancymaae
ENSPKIG00000009607	POLR2E	100	98.095	ENSACLG00000005254	polr2eb	100	98.095	Astatotilapia_calliptera
ENSPKIG00000009607	POLR2E	100	98.095	ENSAMXG00000018915	POLR2E	100	98.095	Astyanax_mexicanus
ENSPKIG00000009607	POLR2E	100	94.762	ENSBTAG00000020776	POLR2E	100	94.762	Bos_taurus
ENSPKIG00000009607	POLR2E	99	78.365	WBGene00019246	rpb-5	99	78.365	Caenorhabditis_elegans
ENSPKIG00000009607	POLR2E	67	90.000	ENSCJAG00000007666	-	77	90.000	Callithrix_jacchus
ENSPKIG00000009607	POLR2E	100	91.905	ENSCAFG00000019546	POLR2E	100	91.905	Canis_familiaris
ENSPKIG00000009607	POLR2E	100	94.762	ENSCAFG00020017111	POLR2E	100	94.762	Canis_lupus_dingo
ENSPKIG00000009607	POLR2E	100	94.762	ENSCHIG00000014151	POLR2E	100	94.762	Capra_hircus
ENSPKIG00000009607	POLR2E	100	78.140	ENSTSYG00000026377	POLR2E	100	78.140	Carlito_syrichta
ENSPKIG00000009607	POLR2E	91	94.271	ENSCAPG00000010843	POLR2E	93	94.271	Cavia_aperea
ENSPKIG00000009607	POLR2E	100	94.762	ENSCPOG00000001542	POLR2E	100	94.762	Cavia_porcellus
ENSPKIG00000009607	POLR2E	100	94.762	ENSCCAG00000025658	POLR2E	100	94.762	Cebus_capucinus
ENSPKIG00000009607	POLR2E	100	94.762	ENSCATG00000008926	POLR2E	100	94.762	Cercocebus_atys
ENSPKIG00000009607	POLR2E	98	72.195	ENSCLAG00000009238	-	100	72.195	Chinchilla_lanigera
ENSPKIG00000009607	POLR2E	100	94.286	ENSCLAG00000014874	-	100	94.286	Chinchilla_lanigera
ENSPKIG00000009607	POLR2E	100	94.762	ENSCSAG00000012336	POLR2E	100	94.762	Chlorocebus_sabaeus
ENSPKIG00000009607	POLR2E	100	95.238	ENSCPBG00000009702	POLR2E	100	95.238	Chrysemys_picta_bellii
ENSPKIG00000009607	POLR2E	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSPKIG00000009607	POLR2E	100	94.762	ENSCANG00000025560	POLR2E	100	94.762	Colobus_angolensis_palliatus
ENSPKIG00000009607	POLR2E	100	94.762	ENSCGRG00001022927	Polr2e	100	94.762	Cricetulus_griseus_chok1gshd
ENSPKIG00000009607	POLR2E	100	88.837	ENSCGRG00000016441	Polr2e	100	88.837	Cricetulus_griseus_crigri
ENSPKIG00000009607	POLR2E	100	96.667	ENSCSEG00000007107	polr2eb	100	96.175	Cynoglossus_semilaevis
ENSPKIG00000009607	POLR2E	100	98.571	ENSCVAG00000019940	polr2eb	100	98.571	Cyprinodon_variegatus
ENSPKIG00000009607	POLR2E	100	97.619	ENSDARG00000026183	polr2eb	100	97.619	Danio_rerio
ENSPKIG00000009607	POLR2E	90	94.211	ENSDNOG00000044994	POLR2E	90	88.780	Dasypus_novemcinctus
ENSPKIG00000009607	POLR2E	100	94.762	ENSDORG00000001154	Polr2e	100	94.762	Dipodomys_ordii
ENSPKIG00000009607	POLR2E	99	85.167	FBgn0033571	Rpb5	99	85.167	Drosophila_melanogaster
ENSPKIG00000009607	POLR2E	75	92.357	ENSEBUG00000010159	-	76	92.357	Eptatretus_burgeri
ENSPKIG00000009607	POLR2E	69	88.276	ENSEASG00005021615	POLR2E	67	82.716	Equus_asinus_asinus
ENSPKIG00000009607	POLR2E	100	93.989	ENSECAG00000011124	POLR2E	100	93.989	Equus_caballus
ENSPKIG00000009607	POLR2E	100	96.190	ENSELUG00000020646	polr2e	100	96.190	Esox_lucius
ENSPKIG00000009607	POLR2E	100	97.143	ENSELUG00000005815	POLR2E	100	97.143	Esox_lucius
ENSPKIG00000009607	POLR2E	100	94.286	ENSFCAG00000007318	POLR2E	100	94.286	Felis_catus
ENSPKIG00000009607	POLR2E	91	94.792	ENSFALG00000013986	POLR2E	99	94.792	Ficedula_albicollis
ENSPKIG00000009607	POLR2E	100	94.762	ENSFDAG00000014539	POLR2E	100	94.762	Fukomys_damarensis
ENSPKIG00000009607	POLR2E	100	98.571	ENSFHEG00000022398	polr2eb	100	98.571	Fundulus_heteroclitus
ENSPKIG00000009607	POLR2E	100	97.143	ENSGMOG00000007615	polr2eb	100	97.143	Gadus_morhua
ENSPKIG00000009607	POLR2E	100	95.238	ENSGALG00000002591	POLR2E	100	95.238	Gallus_gallus
ENSPKIG00000009607	POLR2E	100	98.095	ENSGAFG00000005087	polr2eb	100	98.095	Gambusia_affinis
ENSPKIG00000009607	POLR2E	100	97.619	ENSGACG00000013247	polr2eb	100	97.619	Gasterosteus_aculeatus
ENSPKIG00000009607	POLR2E	100	95.238	ENSGAGG00000008356	POLR2E	100	95.238	Gopherus_agassizii
ENSPKIG00000009607	POLR2E	100	94.762	ENSGGOG00000011267	POLR2E	100	94.762	Gorilla_gorilla
ENSPKIG00000009607	POLR2E	68	93.662	ENSHBUG00000011099	polr2eb	100	93.662	Haplochromis_burtoni
ENSPKIG00000009607	POLR2E	100	94.762	ENSHGLG00000013330	POLR2E	100	94.762	Heterocephalus_glaber_female
ENSPKIG00000009607	POLR2E	100	94.762	ENSHGLG00100011014	POLR2E	100	94.762	Heterocephalus_glaber_male
ENSPKIG00000009607	POLR2E	53	94.643	ENSHCOG00000012099	-	88	94.643	Hippocampus_comes
ENSPKIG00000009607	POLR2E	100	97.143	ENSHCOG00000000906	polr2eb	100	97.143	Hippocampus_comes
ENSPKIG00000009607	POLR2E	100	98.571	ENSIPUG00000019801	polr2e	100	98.571	Ictalurus_punctatus
ENSPKIG00000009607	POLR2E	100	94.762	ENSSTOG00000002853	POLR2E	100	94.762	Ictidomys_tridecemlineatus
ENSPKIG00000009607	POLR2E	100	87.978	ENSJJAG00000003145	-	100	87.978	Jaculus_jaculus
ENSPKIG00000009607	POLR2E	76	79.375	ENSJJAG00000015812	-	99	79.375	Jaculus_jaculus
ENSPKIG00000009607	POLR2E	100	94.762	ENSJJAG00000016595	-	100	94.762	Jaculus_jaculus
ENSPKIG00000009607	POLR2E	100	98.571	ENSKMAG00000005954	polr2eb	100	98.571	Kryptolebias_marmoratus
ENSPKIG00000009607	POLR2E	100	98.571	ENSLBEG00000024802	polr2eb	100	98.571	Labrus_bergylta
ENSPKIG00000009607	POLR2E	100	95.714	ENSLACG00000013686	POLR2E	100	95.714	Latimeria_chalumnae
ENSPKIG00000009607	POLR2E	77	97.531	ENSLOCG00000004599	POLR2E	100	97.531	Lepisosteus_oculatus
ENSPKIG00000009607	POLR2E	100	75.943	ENSLAFG00000025587	POLR2E	100	75.943	Loxodonta_africana
ENSPKIG00000009607	POLR2E	100	94.762	ENSMFAG00000002884	POLR2E	100	94.762	Macaca_fascicularis
ENSPKIG00000009607	POLR2E	100	94.762	ENSMMUG00000013927	POLR2E	100	94.762	Macaca_mulatta
ENSPKIG00000009607	POLR2E	100	64.455	ENSMNEG00000033452	-	100	64.455	Macaca_nemestrina
ENSPKIG00000009607	POLR2E	100	94.762	ENSMNEG00000034046	-	100	94.762	Macaca_nemestrina
ENSPKIG00000009607	POLR2E	92	77.720	ENSMLEG00000012405	POLR2E	94	77.720	Mandrillus_leucophaeus
ENSPKIG00000009607	POLR2E	100	98.571	ENSMAMG00000018703	polr2eb	100	98.571	Mastacembelus_armatus
ENSPKIG00000009607	POLR2E	100	97.814	ENSMZEG00005010796	polr2eb	100	97.814	Maylandia_zebra
ENSPKIG00000009607	POLR2E	100	94.313	ENSMGAG00000003769	POLR2E	100	94.313	Meleagris_gallopavo
ENSPKIG00000009607	POLR2E	100	63.810	ENSMAUG00000011003	-	100	63.810	Mesocricetus_auratus
ENSPKIG00000009607	POLR2E	92	93.782	ENSMAUG00000010125	-	100	94.241	Mesocricetus_auratus
ENSPKIG00000009607	POLR2E	100	94.762	ENSMICG00000013063	POLR2E	100	94.762	Microcebus_murinus
ENSPKIG00000009607	POLR2E	100	94.762	ENSMOCG00000013414	Polr2e	100	94.762	Microtus_ochrogaster
ENSPKIG00000009607	POLR2E	100	96.175	ENSMMOG00000001161	polr2eb	100	96.175	Mola_mola
ENSPKIG00000009607	POLR2E	91	89.005	ENSMMOG00000001167	polr2eb	88	89.005	Mola_mola
ENSPKIG00000009607	POLR2E	100	95.238	ENSMODG00000005494	POLR2E	100	95.238	Monodelphis_domestica
ENSPKIG00000009607	POLR2E	100	97.619	ENSMALG00000021888	polr2eb	100	97.619	Monopterus_albus
ENSPKIG00000009607	POLR2E	100	94.762	MGP_CAROLIEiJ_G0015561	Polr2e	100	94.762	Mus_caroli
ENSPKIG00000009607	POLR2E	100	94.762	ENSMUSG00000004667	Polr2e	100	94.762	Mus_musculus
ENSPKIG00000009607	POLR2E	100	94.762	MGP_PahariEiJ_G0030974	Polr2e	100	94.762	Mus_pahari
ENSPKIG00000009607	POLR2E	100	94.762	MGP_SPRETEiJ_G0016379	Polr2e	100	94.762	Mus_spretus
ENSPKIG00000009607	POLR2E	100	93.810	ENSMPUG00000008953	POLR2E	100	93.810	Mustela_putorius_furo
ENSPKIG00000009607	POLR2E	66	89.855	ENSMLUG00000006376	-	100	79.630	Myotis_lucifugus
ENSPKIG00000009607	POLR2E	100	94.762	ENSMLUG00000013193	POLR2E	100	94.762	Myotis_lucifugus
ENSPKIG00000009607	POLR2E	85	71.508	ENSNGAG00000017344	-	96	71.508	Nannospalax_galili
ENSPKIG00000009607	POLR2E	100	94.762	ENSNGAG00000001147	Polr2e	100	94.762	Nannospalax_galili
ENSPKIG00000009607	POLR2E	100	97.814	ENSNBRG00000022772	polr2eb	100	97.814	Neolamprologus_brichardi
ENSPKIG00000009607	POLR2E	100	90.995	ENSNLEG00000001207	-	100	90.995	Nomascus_leucogenys
ENSPKIG00000009607	POLR2E	100	72.381	ENSNLEG00000031364	-	100	72.381	Nomascus_leucogenys
ENSPKIG00000009607	POLR2E	100	83.333	ENSOPRG00000008331	POLR2E	100	83.333	Ochotona_princeps
ENSPKIG00000009607	POLR2E	89	83.871	ENSODEG00000007985	-	100	83.871	Octodon_degus
ENSPKIG00000009607	POLR2E	100	70.312	ENSODEG00000011490	-	100	70.312	Octodon_degus
ENSPKIG00000009607	POLR2E	100	94.762	ENSODEG00000013230	-	100	94.762	Octodon_degus
ENSPKIG00000009607	POLR2E	100	97.619	ENSONIG00000002519	polr2eb	100	97.619	Oreochromis_niloticus
ENSPKIG00000009607	POLR2E	100	98.095	ENSORLG00000015346	polr2eb	100	98.095	Oryzias_latipes
ENSPKIG00000009607	POLR2E	100	98.095	ENSORLG00020020700	polr2e	100	98.095	Oryzias_latipes_hni
ENSPKIG00000009607	POLR2E	100	98.095	ENSORLG00015016842	polr2e	100	98.095	Oryzias_latipes_hsok
ENSPKIG00000009607	POLR2E	100	98.571	ENSOMEG00000002709	polr2eb	100	98.571	Oryzias_melastigma
ENSPKIG00000009607	POLR2E	100	94.762	ENSOGAG00000012311	POLR2E	100	94.762	Otolemur_garnettii
ENSPKIG00000009607	POLR2E	100	94.762	ENSOARG00000010994	POLR2E	100	94.762	Ovis_aries
ENSPKIG00000009607	POLR2E	91	94.241	ENSPPAG00000003145	POLR2E	100	94.241	Pan_paniscus
ENSPKIG00000009607	POLR2E	100	94.286	ENSPPRG00000000777	POLR2E	100	94.286	Panthera_pardus
ENSPKIG00000009607	POLR2E	90	84.242	ENSPTIG00000012237	POLR2E	98	88.816	Panthera_tigris_altaica
ENSPKIG00000009607	POLR2E	100	94.762	ENSPTRG00000010183	POLR2E	100	94.762	Pan_troglodytes
ENSPKIG00000009607	POLR2E	100	94.762	ENSPANG00000018011	POLR2E	100	94.762	Papio_anubis
ENSPKIG00000009607	POLR2E	98	91.220	ENSPSIG00000002870	POLR2E	99	91.220	Pelodiscus_sinensis
ENSPKIG00000009607	POLR2E	100	98.361	ENSPMGG00000014354	polr2eb	100	98.361	Periophthalmus_magnuspinnatus
ENSPKIG00000009607	POLR2E	100	94.762	ENSPEMG00000023261	Polr2e	100	94.762	Peromyscus_maniculatus_bairdii
ENSPKIG00000009607	POLR2E	90	94.709	ENSPCIG00000007312	POLR2E	75	94.709	Phascolarctos_cinereus
ENSPKIG00000009607	POLR2E	100	98.095	ENSPFOG00000005734	polr2eb	100	98.095	Poecilia_formosa
ENSPKIG00000009607	POLR2E	100	98.095	ENSPLAG00000014496	polr2eb	100	98.095	Poecilia_latipinna
ENSPKIG00000009607	POLR2E	100	98.095	ENSPMEG00000008053	polr2eb	100	98.095	Poecilia_mexicana
ENSPKIG00000009607	POLR2E	100	98.095	ENSPREG00000006489	polr2eb	100	98.095	Poecilia_reticulata
ENSPKIG00000009607	POLR2E	100	87.678	ENSPPYG00000009305	POLR2E	100	87.678	Pongo_abelii
ENSPKIG00000009607	POLR2E	53	92.793	ENSPCAG00000016605	POLR2E	100	92.793	Procavia_capensis
ENSPKIG00000009607	POLR2E	100	94.762	ENSPCOG00000014491	POLR2E	100	94.762	Propithecus_coquereli
ENSPKIG00000009607	POLR2E	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSPKIG00000009607	POLR2E	90	97.895	ENSPNYG00000019797	polr2eb	97	97.396	Pundamilia_nyererei
ENSPKIG00000009607	POLR2E	100	97.619	ENSPNAG00000026263	POLR2E	100	97.619	Pygocentrus_nattereri
ENSPKIG00000009607	POLR2E	100	94.762	ENSRNOG00000013545	Polr2e	100	94.762	Rattus_norvegicus
ENSPKIG00000009607	POLR2E	100	70.142	ENSRBIG00000027259	-	100	70.142	Rhinopithecus_bieti
ENSPKIG00000009607	POLR2E	100	94.762	ENSRBIG00000028726	-	100	94.762	Rhinopithecus_bieti
ENSPKIG00000009607	POLR2E	100	94.762	ENSRROG00000043763	POLR2E	100	94.762	Rhinopithecus_roxellana
ENSPKIG00000009607	POLR2E	99	44.954	YBR154C	RPB5	98	44.954	Saccharomyces_cerevisiae
ENSPKIG00000009607	POLR2E	100	94.762	ENSSBOG00000027241	POLR2E	100	94.762	Saimiri_boliviensis_boliviensis
ENSPKIG00000009607	POLR2E	100	95.238	ENSSHAG00000010690	POLR2E	100	95.238	Sarcophilus_harrisii
ENSPKIG00000009607	POLR2E	100	98.571	ENSSFOG00015006073	polr2e	100	98.571	Scleropages_formosus
ENSPKIG00000009607	POLR2E	100	98.571	ENSSMAG00000012782	polr2eb	100	98.571	Scophthalmus_maximus
ENSPKIG00000009607	POLR2E	100	98.571	ENSSDUG00000003352	polr2eb	100	98.571	Seriola_dumerili
ENSPKIG00000009607	POLR2E	100	98.571	ENSSLDG00000004965	polr2eb	100	98.571	Seriola_lalandi_dorsalis
ENSPKIG00000009607	POLR2E	100	95.238	ENSSPUG00000006114	POLR2E	100	95.238	Sphenodon_punctatus
ENSPKIG00000009607	POLR2E	100	98.571	ENSSPAG00000017556	polr2eb	100	98.571	Stegastes_partitus
ENSPKIG00000009607	POLR2E	100	94.762	ENSSSCG00000021472	POLR2E	100	94.762	Sus_scrofa
ENSPKIG00000009607	POLR2E	64	94.068	ENSTGUG00000000922	POLR2E	99	87.143	Taeniopygia_guttata
ENSPKIG00000009607	POLR2E	100	98.361	ENSTRUG00000018238	polr2eb	100	98.361	Takifugu_rubripes
ENSPKIG00000009607	POLR2E	100	98.571	ENSTNIG00000013187	polr2eb	100	98.571	Tetraodon_nigroviridis
ENSPKIG00000009607	POLR2E	100	94.286	ENSTTRG00000001484	POLR2E	100	94.286	Tursiops_truncatus
ENSPKIG00000009607	POLR2E	100	93.443	ENSUAMG00000009166	POLR2E	100	93.443	Ursus_americanus
ENSPKIG00000009607	POLR2E	100	94.762	ENSVVUG00000022818	POLR2E	54	94.762	Vulpes_vulpes
ENSPKIG00000009607	POLR2E	100	96.190	ENSXETG00000003291	polr2e	100	96.190	Xenopus_tropicalis
ENSPKIG00000009607	POLR2E	100	97.814	ENSXCOG00000009197	polr2eb	100	97.814	Xiphophorus_couchianus
ENSPKIG00000009607	POLR2E	100	98.095	ENSXMAG00000026495	polr2eb	100	98.095	Xiphophorus_maculatus