EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000009667 (Gene tree)
Gene ID: 111850867
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 272752 bases
Position: chrPGUA01000211.1:62210-334961
Accession: 111850867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000027945	Fox-1_C	PF12414.8	3.2e-42	1	1
ENSPKIP00000027852	Fox-1_C	PF12414.8	3.5e-42	1	1
ENSPKIP00000027909	Fox-1_C	PF12414.8	3.7e-42	1	1
ENSPKIP00000027759	Fox-1_C	PF12414.8	3.8e-42	1	1
ENSPKIP00000027819	Fox-1_C	PF12414.8	4.1e-42	1	1
ENSPKIP00000027790	Fox-1_C	PF12414.8	4.4e-42	1	1
ENSPKIP00000027886	Fox-1_C	PF12414.8	5.3e-40	1	1
ENSPKIP00000027736	Fox-1_C	PF12414.8	7.1e-40	1	1
ENSPKIP00000027984	Fox-1_C	PF12414.8	1.4e-37	1	1
ENSPKIP00000027886	RRM_1	PF00076.22	3.4e-18	1	1
ENSPKIP00000027945	RRM_1	PF00076.22	3.8e-18	1	1
ENSPKIP00000027852	RRM_1	PF00076.22	4.2e-18	1	1
ENSPKIP00000027736	RRM_1	PF00076.22	4.3e-18	1	1
ENSPKIP00000027984	RRM_1	PF00076.22	4.4e-18	1	1
ENSPKIP00000027819	RRM_1	PF00076.22	4.7e-18	1	1
ENSPKIP00000027759	RRM_1	PF00076.22	4.9e-18	1	1
ENSPKIP00000027909	RRM_1	PF00076.22	4.9e-18	1	1
ENSPKIP00000027790	RRM_1	PF00076.22	5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000008682	-	2194	-	ENSPKIP00000027909	419 (aa)	-	-
ENSPKIT00000008759	-	1472	-	ENSPKIP00000027984	397 (aa)	-	-
ENSPKIT00000008530	-	3427	XM_023825202	ENSPKIP00000027759	421 (aa)	XP_023680970	UPI000CD5FEDB
ENSPKIT00000008719	-	2395	-	ENSPKIP00000027945	360 (aa)	-	-
ENSPKIT00000008624	-	2148	-	ENSPKIP00000027852	390 (aa)	-	-
ENSPKIT00000008507	-	3480	-	ENSPKIP00000027736	398 (aa)	-	-
ENSPKIT00000008592	-	2460	-	ENSPKIP00000027819	415 (aa)	-	-
ENSPKIT00000008562	-	2502	-	ENSPKIP00000027790	429 (aa)	-	-
ENSPKIT00000008659	-	3366	-	ENSPKIP00000027886	346 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000009667's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000009667's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000009667	-	63	69.528	ENSPKIG00000012029	rbfox1l	60	71.053
ENSPKIG00000009667	-	89	74.598	ENSPKIG00000010299	rbfox3a	86	75.828
ENSPKIG00000009667	-	67	65.462	ENSPKIG00000010816	-	79	63.230
ENSPKIG00000009667	-	78	92.989	ENSPKIG00000019353	rbfox1	88	92.251
ENSPKIG00000009667	-	90	61.736	ENSPKIG00000022633	-	94	59.599
ENSPKIG00000009667	-	83	59.150	ENSPKIG00000006854	-	84	50.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000009667	-	95	90.616	ENSG00000078328	RBFOX1	100	88.441	Homo_sapiens
ENSPKIG00000009667	-	95	82.865	ENSAPOG00000003197	rbfox1	100	81.701	Acanthochromis_polyacanthus
ENSPKIG00000009667	-	64	85.909	ENSAMEG00000008605	RBFOX1	89	84.821	Ailuropoda_melanoleuca
ENSPKIG00000009667	-	67	72.491	ENSACIG00000005478	rbfox1	68	72.491	Amphilophus_citrinellus
ENSPKIG00000009667	-	77	78.521	ENSAOCG00000008283	rbfox1	96	78.136	Amphiprion_ocellaris
ENSPKIG00000009667	-	95	69.359	ENSAPEG00000010636	rbfox1	100	69.382	Amphiprion_percula
ENSPKIG00000009667	-	77	77.003	ENSATEG00000007513	rbfox1	100	76.190	Anabas_testudineus
ENSPKIG00000009667	-	95	85.326	ENSAPLG00000013263	RBFOX1	97	85.166	Anas_platyrhynchos
ENSPKIG00000009667	-	95	81.132	ENSACAG00000004013	RBFOX1	99	80.905	Anolis_carolinensis
ENSPKIG00000009667	-	95	90.323	ENSANAG00000029527	RBFOX1	97	88.767	Aotus_nancymaae
ENSPKIG00000009667	-	64	87.892	ENSAMXG00000002431	rbfox1	73	86.454	Astyanax_mexicanus
ENSPKIG00000009667	-	99	82.210	ENSBTAG00000007210	RBFOX1	98	81.671	Bos_taurus
ENSPKIG00000009667	-	95	87.427	ENSCJAG00000017351	RBFOX1	93	86.066	Callithrix_jacchus
ENSPKIG00000009667	-	99	80.541	ENSCAFG00000019082	RBFOX1	94	80.916	Canis_familiaris
ENSPKIG00000009667	-	99	69.648	ENSCAFG00020024881	RBFOX1	92	69.648	Canis_lupus_dingo
ENSPKIG00000009667	-	99	82.210	ENSCHIG00000023549	RBFOX1	98	81.671	Capra_hircus
ENSPKIG00000009667	-	95	90.909	ENSTSYG00000005334	RBFOX1	100	89.807	Carlito_syrichta
ENSPKIG00000009667	-	95	82.609	ENSCAPG00000017669	RBFOX1	100	82.051	Cavia_aperea
ENSPKIG00000009667	-	95	82.609	ENSCPOG00000011314	RBFOX1	100	81.203	Cavia_porcellus
ENSPKIG00000009667	-	95	90.323	ENSCCAG00000023031	RBFOX1	97	88.767	Cebus_capucinus
ENSPKIG00000009667	-	95	90.616	ENSCATG00000033816	RBFOX1	97	89.041	Cercocebus_atys
ENSPKIG00000009667	-	99	81.572	ENSCLAG00000012761	RBFOX1	100	80.952	Chinchilla_lanigera
ENSPKIG00000009667	-	99	82.210	ENSCSAG00000008739	RBFOX1	98	81.671	Chlorocebus_sabaeus
ENSPKIG00000009667	-	68	87.037	ENSCHOG00000012843	RBFOX1	63	90.769	Choloepus_hoffmanni
ENSPKIG00000009667	-	95	92.375	ENSCPBG00000026626	RBFOX1	97	89.000	Chrysemys_picta_bellii
ENSPKIG00000009667	-	95	90.616	ENSCANG00000033125	RBFOX1	97	89.041	Colobus_angolensis_palliatus
ENSPKIG00000009667	-	95	82.880	ENSCGRG00001013729	Rbfox1	100	81.454	Cricetulus_griseus_chok1gshd
ENSPKIG00000009667	-	95	82.880	ENSCGRG00000003272	Rbfox1	100	81.454	Cricetulus_griseus_crigri
ENSPKIG00000009667	-	95	76.323	ENSCSEG00000008840	rbfox1	100	75.946	Cynoglossus_semilaevis
ENSPKIG00000009667	-	95	88.012	ENSDARG00000014746	rbfox1	100	96.137	Danio_rerio
ENSPKIG00000009667	-	95	83.152	ENSDNOG00000043612	RBFOX1	94	82.398	Dasypus_novemcinctus
ENSPKIG00000009667	-	95	82.114	ENSDORG00000010024	Rbfox1	98	81.726	Dipodomys_ordii
ENSPKIG00000009667	-	95	69.648	ENSETEG00000003771	RBFOX1	94	69.720	Echinops_telfairi
ENSPKIG00000009667	-	99	80.270	ENSEASG00005011599	RBFOX1	98	80.612	Equus_asinus_asinus
ENSPKIG00000009667	-	99	82.210	ENSECAG00000012667	RBFOX1	98	81.671	Equus_caballus
ENSPKIG00000009667	-	95	56.012	ENSELUG00000013096	rbfox1	100	56.452	Esox_lucius
ENSPKIG00000009667	-	95	90.616	ENSFCAG00000025322	RBFOX1	94	88.144	Felis_catus
ENSPKIG00000009667	-	87	83.587	ENSFALG00000004027	RBFOX1	100	82.143	Ficedula_albicollis
ENSPKIG00000009667	-	95	83.152	ENSFDAG00000007388	RBFOX1	100	81.704	Fukomys_damarensis
ENSPKIG00000009667	-	99	91.908	ENSGALG00000034325	RBFOX1	97	84.553	Gallus_gallus
ENSPKIG00000009667	-	95	89.766	ENSGAGG00000023681	RBFOX1	100	85.488	Gopherus_agassizii
ENSPKIG00000009667	-	95	90.616	ENSGGOG00000016871	-	97	89.041	Gorilla_gorilla
ENSPKIG00000009667	-	99	81.843	ENSHGLG00000016944	RBFOX1	100	81.454	Heterocephalus_glaber_female
ENSPKIG00000009667	-	99	81.843	ENSHGLG00100003272	RBFOX1	100	81.454	Heterocephalus_glaber_male
ENSPKIG00000009667	-	95	69.527	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSPKIG00000009667	-	99	88.081	ENSIPUG00000015215	rbfox1	100	89.205	Ictalurus_punctatus
ENSPKIG00000009667	-	98	82.834	ENSSTOG00000000322	RBFOX1	100	81.955	Ictidomys_tridecemlineatus
ENSPKIG00000009667	-	95	80.707	ENSJJAG00000002575	Rbfox1	100	80.201	Jaculus_jaculus
ENSPKIG00000009667	-	96	79.558	ENSLBEG00000014659	rbfox1	99	78.342	Labrus_bergylta
ENSPKIG00000009667	-	95	85.445	ENSLOCG00000006675	rbfox1	99	85.823	Lepisosteus_oculatus
ENSPKIG00000009667	-	75	82.828	ENSLAFG00000011480	RBFOX1	100	83.766	Loxodonta_africana
ENSPKIG00000009667	-	95	90.909	ENSMFAG00000036447	RBFOX1	97	89.315	Macaca_fascicularis
ENSPKIG00000009667	-	95	90.909	ENSMMUG00000003458	RBFOX1	97	89.315	Macaca_mulatta
ENSPKIG00000009667	-	99	89.244	ENSMNEG00000032034	RBFOX1	94	80.916	Macaca_nemestrina
ENSPKIG00000009667	-	95	90.616	ENSMLEG00000015382	RBFOX1	97	89.041	Mandrillus_leucophaeus
ENSPKIG00000009667	-	95	78.814	ENSMAMG00000003142	rbfox1	100	79.452	Mastacembelus_armatus
ENSPKIG00000009667	-	75	82.517	ENSMGAG00000008606	RBFOX1	95	82.310	Meleagris_gallopavo
ENSPKIG00000009667	-	94	50.708	ENSMAUG00000020570	Rbfox1	95	50.538	Mesocricetus_auratus
ENSPKIG00000009667	-	95	90.029	ENSMICG00000034286	RBFOX1	97	88.493	Microcebus_murinus
ENSPKIG00000009667	-	95	82.609	ENSMOCG00000020932	Rbfox1	99	82.552	Microtus_ochrogaster
ENSPKIG00000009667	-	87	78.344	ENSMMOG00000009716	rbfox1	86	75.159	Mola_mola
ENSPKIG00000009667	-	95	85.112	ENSMODG00000005826	RBFOX1	100	84.551	Monodelphis_domestica
ENSPKIG00000009667	-	95	82.571	ENSMALG00000003337	rbfox1	100	81.414	Monopterus_albus
ENSPKIG00000009667	-	99	81.402	MGP_CAROLIEiJ_G0020427	Rbfox1	100	81.454	Mus_caroli
ENSPKIG00000009667	-	95	84.571	ENSMUSG00000008658	Rbfox1	99	86.364	Mus_musculus
ENSPKIG00000009667	-	99	81.402	MGP_PahariEiJ_G0016135	Rbfox1	100	81.454	Mus_pahari
ENSPKIG00000009667	-	99	81.402	MGP_SPRETEiJ_G0021321	Rbfox1	100	81.454	Mus_spretus
ENSPKIG00000009667	-	99	82.114	ENSMPUG00000014822	RBFOX1	93	81.572	Mustela_putorius_furo
ENSPKIG00000009667	-	75	83.108	ENSMLUG00000015896	RBFOX1	100	84.039	Myotis_lucifugus
ENSPKIG00000009667	-	95	83.424	ENSNGAG00000023276	Rbfox1	100	82.821	Nannospalax_galili
ENSPKIG00000009667	-	95	62.234	ENSNBRG00000011084	rbfox1	94	62.095	Neolamprologus_brichardi
ENSPKIG00000009667	-	95	90.323	ENSNLEG00000010017	-	97	88.767	Nomascus_leucogenys
ENSPKIG00000009667	-	73	90.821	ENSMEUG00000012525	RBFOX1	68	93.846	Notamacropus_eugenii
ENSPKIG00000009667	-	82	88.889	ENSOPRG00000006199	-	76	85.455	Ochotona_princeps
ENSPKIG00000009667	-	95	82.609	ENSODEG00000013166	RBFOX1	100	81.203	Octodon_degus
ENSPKIG00000009667	-	99	83.827	ENSOANG00000002379	RBFOX1	100	82.011	Ornithorhynchus_anatinus
ENSPKIG00000009667	-	64	84.753	ENSOCUG00000001205	-	100	83.260	Oryctolagus_cuniculus
ENSPKIG00000009667	-	95	83.424	ENSOGAG00000025535	RBFOX1	100	81.454	Otolemur_garnettii
ENSPKIG00000009667	-	64	74.545	ENSOARG00000005135	RBFOX1	88	72.247	Ovis_aries
ENSPKIG00000009667	-	95	90.616	ENSPPAG00000036238	-	100	89.532	Pan_paniscus
ENSPKIG00000009667	-	95	90.616	ENSPPRG00000006546	RBFOX1	97	89.041	Panthera_pardus
ENSPKIG00000009667	-	95	76.791	ENSPTIG00000021154	RBFOX1	99	74.332	Panthera_tigris_altaica
ENSPKIG00000009667	-	95	90.616	ENSPTRG00000007744	RBFOX1	97	89.041	Pan_troglodytes
ENSPKIG00000009667	-	95	90.616	ENSPANG00000026500	RBFOX1	97	89.041	Papio_anubis
ENSPKIG00000009667	-	95	85.326	ENSPSIG00000006523	RBFOX1	97	85.166	Pelodiscus_sinensis
ENSPKIG00000009667	-	95	82.880	ENSPEMG00000017607	Rbfox1	100	81.454	Peromyscus_maniculatus_bairdii
ENSPKIG00000009667	-	70	79.928	ENSPCIG00000026887	RBFOX1	100	81.379	Phascolarctos_cinereus
ENSPKIG00000009667	-	99	82.385	ENSPPYG00000007079	-	93	81.843	Pongo_abelii
ENSPKIG00000009667	-	87	72.647	ENSPCAG00000002630	RBFOX1	94	71.148	Procavia_capensis
ENSPKIG00000009667	-	95	90.029	ENSPCOG00000025687	RBFOX1	97	88.493	Propithecus_coquereli
ENSPKIG00000009667	-	95	77.236	ENSPVAG00000013467	RBFOX1	94	76.590	Pteropus_vampyrus
ENSPKIG00000009667	-	95	85.556	ENSPNAG00000023109	rbfox1	100	86.523	Pygocentrus_nattereri
ENSPKIG00000009667	-	99	79.032	ENSRNOG00000002827	Rbfox1	98	78.495	Rattus_norvegicus
ENSPKIG00000009667	-	95	90.616	ENSRBIG00000044478	RBFOX1	100	89.532	Rhinopithecus_bieti
ENSPKIG00000009667	-	95	90.616	ENSRROG00000044411	RBFOX1	97	89.041	Rhinopithecus_roxellana
ENSPKIG00000009667	-	95	89.736	ENSSBOG00000033726	RBFOX1	97	88.219	Saimiri_boliviensis_boliviensis
ENSPKIG00000009667	-	95	90.000	ENSSHAG00000009257	RBFOX1	100	89.394	Sarcophilus_harrisii
ENSPKIG00000009667	-	95	75.660	ENSSFOG00015023675	rbfox1	98	75.068	Scleropages_formosus
ENSPKIG00000009667	-	90	75.549	ENSSFOG00015009955	-	90	73.816	Scleropages_formosus
ENSPKIG00000009667	-	95	81.972	ENSSMAG00000015505	rbfox1	97	79.551	Scophthalmus_maximus
ENSPKIG00000009667	-	95	79.360	ENSSDUG00000016413	rbfox1	99	77.384	Seriola_dumerili
ENSPKIG00000009667	-	87	78.095	ENSSLDG00000009353	rbfox1	98	78.443	Seriola_lalandi_dorsalis
ENSPKIG00000009667	-	87	86.984	ENSSPUG00000009732	RBFOX1	87	86.349	Sphenodon_punctatus
ENSPKIG00000009667	-	95	82.022	ENSSPAG00000009723	rbfox1	100	81.266	Stegastes_partitus
ENSPKIG00000009667	-	99	79.730	ENSSSCG00000007917	RBFOX1	100	82.584	Sus_scrofa
ENSPKIG00000009667	-	95	85.326	ENSTGUG00000004562	RBFOX1	100	85.166	Taeniopygia_guttata
ENSPKIG00000009667	-	95	81.921	ENSTRUG00000020940	rbfox1	99	81.217	Takifugu_rubripes
ENSPKIG00000009667	-	67	63.763	ENSTNIG00000002567	rbfox1	100	65.505	Tetraodon_nigroviridis
ENSPKIG00000009667	-	62	91.852	ENSTBEG00000009169	-	56	91.852	Tupaia_belangeri
ENSPKIG00000009667	-	95	80.488	ENSTTRG00000005700	RBFOX1	94	79.644	Tursiops_truncatus
ENSPKIG00000009667	-	99	83.041	ENSUAMG00000024633	RBFOX1	100	77.839	Ursus_americanus
ENSPKIG00000009667	-	99	73.011	ENSUMAG00000003579	RBFOX1	97	75.138	Ursus_maritimus
ENSPKIG00000009667	-	75	80.135	ENSVPAG00000001284	RBFOX1	74	81.169	Vicugna_pacos
ENSPKIG00000009667	-	95	90.909	ENSVVUG00000017311	RBFOX1	94	88.402	Vulpes_vulpes