EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000009902 (Gene tree)
Gene ID: 111860251
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 34827 bases
Position: chrPGUA01000005.1:1724082-1758908
Accession: 111860251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000028139	RRM_5	PF13893.6	9e-07	1	1
ENSPKIP00000028170	RRM_5	PF13893.6	9.8e-07	1	1
ENSPKIP00000028139	RRM_1	PF00076.22	2.6e-13	1	1
ENSPKIP00000028170	RRM_1	PF00076.22	2.7e-13	1	1
ENSPKIP00000028170	SAP	PF02037.27	4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000008915	-	5954	-	ENSPKIP00000028139	815 (aa)	XP_023699515	UPI000CD652B7
ENSPKIT00000008946	-	6119	-	ENSPKIP00000028170	870 (aa)	XP_023699514	UPI000CD5CB1F

Gene Model

Click here to download ENSPKIG00000009902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000009902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000009902	safb	68	52.525	ENSPKIG00000022760	sltm	66	52.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000009902	safb	67	45.997	ENSG00000160633	SAFB	95	43.133	Homo_sapiens
ENSPKIG00000009902	safb	99	64.638	ENSAPOG00000022508	safb	99	64.524	Acanthochromis_polyacanthus
ENSPKIG00000009902	safb	87	42.241	ENSAMEG00000012254	SAFB	94	42.467	Ailuropoda_melanoleuca
ENSPKIG00000009902	safb	99	58.570	ENSACIG00000006247	safb	99	59.818	Amphilophus_citrinellus
ENSPKIG00000009902	safb	95	64.362	ENSAOCG00000006308	safb	99	63.735	Amphiprion_ocellaris
ENSPKIG00000009902	safb	99	64.579	ENSAPEG00000023342	safb	99	64.351	Amphiprion_percula
ENSPKIG00000009902	safb	99	65.227	ENSATEG00000004998	safb	99	65.114	Anabas_testudineus
ENSPKIG00000009902	safb	61	48.571	ENSAPLG00000006355	-	96	51.937	Anas_platyrhynchos
ENSPKIG00000009902	safb	62	44.007	ENSAPLG00000005780	-	98	46.517	Anas_platyrhynchos
ENSPKIG00000009902	safb	50	57.562	ENSACAG00000016893	-	96	43.616	Anolis_carolinensis
ENSPKIG00000009902	safb	67	45.827	ENSANAG00000028821	SAFB	95	43.133	Aotus_nancymaae
ENSPKIG00000009902	safb	99	61.356	ENSACLG00000001926	safb	99	61.287	Astatotilapia_calliptera
ENSPKIG00000009902	safb	98	65.904	ENSAMXG00000018154	safb	100	65.889	Astyanax_mexicanus
ENSPKIG00000009902	safb	98	44.444	ENSBTAG00000007875	SAFB	90	42.857	Bos_taurus
ENSPKIG00000009902	safb	56	56.338	ENSCJAG00000017081	SAFB	89	51.875	Callithrix_jacchus
ENSPKIG00000009902	safb	87	42.174	ENSCAFG00000018803	SAFB	80	42.920	Canis_familiaris
ENSPKIG00000009902	safb	87	42.174	ENSCAFG00020018943	SAFB	95	42.366	Canis_lupus_dingo
ENSPKIG00000009902	safb	98	44.879	ENSCHIG00000007262	SAFB	91	42.630	Capra_hircus
ENSPKIG00000009902	safb	67	45.755	ENSCCAG00000020193	SAFB	95	43.301	Cebus_capucinus
ENSPKIG00000009902	safb	67	46.069	ENSCATG00000029994	SAFB	95	42.918	Cercocebus_atys
ENSPKIG00000009902	safb	85	40.693	ENSCLAG00000007734	SAFB	95	44.351	Chinchilla_lanigera
ENSPKIG00000009902	safb	67	46.069	ENSCSAG00000009949	SAFB	95	42.918	Chlorocebus_sabaeus
ENSPKIG00000009902	safb	69	54.630	ENSCHOG00000003208	SAFB	88	36.658	Choloepus_hoffmanni
ENSPKIG00000009902	safb	93	46.763	ENSCPBG00000010928	-	98	47.308	Chrysemys_picta_bellii
ENSPKIG00000009902	safb	92	48.131	ENSCPBG00000010936	-	98	49.095	Chrysemys_picta_bellii
ENSPKIG00000009902	safb	95	39.795	ENSCANG00000004774	-	94	45.426	Colobus_angolensis_palliatus
ENSPKIG00000009902	safb	95	44.653	ENSCANG00000019754	-	94	41.164	Colobus_angolensis_palliatus
ENSPKIG00000009902	safb	66	53.368	ENSCSEG00000019870	safb	100	56.120	Cynoglossus_semilaevis
ENSPKIG00000009902	safb	99	55.161	ENSCVAG00000002226	safb	99	54.181	Cyprinodon_variegatus
ENSPKIG00000009902	safb	98	64.692	ENSDARG00000020467	safb	99	64.334	Danio_rerio
ENSPKIG00000009902	safb	67	45.101	ENSDNOG00000015746	SAFB	95	41.619	Dasypus_novemcinctus
ENSPKIG00000009902	safb	65	43.651	ENSDORG00000016200	Safb	92	42.035	Dipodomys_ordii
ENSPKIG00000009902	safb	66	43.871	ENSEASG00005023019	SAFB	95	42.628	Equus_asinus_asinus
ENSPKIG00000009902	safb	75	55.140	ENSECAG00000018659	SAFB	83	42.140	Equus_caballus
ENSPKIG00000009902	safb	100	65.506	ENSELUG00000022327	safb	100	65.955	Esox_lucius
ENSPKIG00000009902	safb	87	42.857	ENSFCAG00000011835	SAFB	99	42.828	Felis_catus
ENSPKIG00000009902	safb	59	46.010	ENSFALG00000013881	-	94	49.590	Ficedula_albicollis
ENSPKIG00000009902	safb	68	47.531	ENSFALG00000013882	-	88	47.564	Ficedula_albicollis
ENSPKIG00000009902	safb	87	43.701	ENSFDAG00000020306	SAFB	93	48.905	Fukomys_damarensis
ENSPKIG00000009902	safb	99	55.899	ENSFHEG00000004219	safb	99	55.606	Fundulus_heteroclitus
ENSPKIG00000009902	safb	100	57.469	ENSGMOG00000014280	safb	100	59.322	Gadus_morhua
ENSPKIG00000009902	safb	68	46.802	ENSGALG00000013365	-	98	47.730	Gallus_gallus
ENSPKIG00000009902	safb	67	47.939	ENSGALG00000001948	-	94	50.697	Gallus_gallus
ENSPKIG00000009902	safb	99	53.691	ENSGAFG00000016162	safb	99	53.296	Gambusia_affinis
ENSPKIG00000009902	safb	100	61.330	ENSGACG00000011385	safb	100	60.694	Gasterosteus_aculeatus
ENSPKIG00000009902	safb	74	48.103	ENSGAGG00000017702	-	97	49.538	Gopherus_agassizii
ENSPKIG00000009902	safb	96	50.422	ENSGAGG00000008424	-	99	50.749	Gopherus_agassizii
ENSPKIG00000009902	safb	67	46.154	ENSGGOG00000015109	SAFB	95	42.965	Gorilla_gorilla
ENSPKIG00000009902	safb	99	51.818	ENSHBUG00000009218	safb	99	55.153	Haplochromis_burtoni
ENSPKIG00000009902	safb	81	43.939	ENSHGLG00000015883	SAFB	95	42.328	Heterocephalus_glaber_female
ENSPKIG00000009902	safb	83	44.322	ENSHGLG00100004228	SAFB	73	44.068	Heterocephalus_glaber_male
ENSPKIG00000009902	safb	94	54.776	ENSHCOG00000001705	safb	99	56.311	Hippocampus_comes
ENSPKIG00000009902	safb	100	64.938	ENSIPUG00000024869	safb2	100	65.953	Ictalurus_punctatus
ENSPKIG00000009902	safb	66	40.315	ENSJJAG00000009021	Safb	93	41.542	Jaculus_jaculus
ENSPKIG00000009902	safb	99	60.884	ENSKMAG00000022308	safb	99	61.338	Kryptolebias_marmoratus
ENSPKIG00000009902	safb	99	63.235	ENSLBEG00000006015	safb	99	63.134	Labrus_bergylta
ENSPKIG00000009902	safb	67	46.296	ENSLACG00000018090	SAFB	98	51.155	Latimeria_chalumnae
ENSPKIG00000009902	safb	98	74.220	ENSLOCG00000003613	safb	99	74.335	Lepisosteus_oculatus
ENSPKIG00000009902	safb	95	43.931	ENSLAFG00000003840	SAFB	94	43.961	Loxodonta_africana
ENSPKIG00000009902	safb	67	45.840	ENSMFAG00000003885	SAFB	95	43.194	Macaca_fascicularis
ENSPKIG00000009902	safb	67	46.069	ENSMMUG00000017970	SAFB	95	42.918	Macaca_mulatta
ENSPKIG00000009902	safb	67	44.160	ENSMNEG00000035637	SAFB	95	41.703	Macaca_nemestrina
ENSPKIG00000009902	safb	95	44.923	ENSMLEG00000038637	SAFB	67	62.500	Mandrillus_leucophaeus
ENSPKIG00000009902	safb	99	63.616	ENSMAMG00000003357	safb	91	62.909	Mastacembelus_armatus
ENSPKIG00000009902	safb	99	63.063	ENSMZEG00005009120	safb	99	62.767	Maylandia_zebra
ENSPKIG00000009902	safb	62	44.923	ENSMGAG00000001101	-	95	46.734	Meleagris_gallopavo
ENSPKIG00000009902	safb	54	59.412	ENSMGAG00000001051	-	84	59.412	Meleagris_gallopavo
ENSPKIG00000009902	safb	87	40.571	ENSMICG00000046795	-	71	69.565	Microcebus_murinus
ENSPKIG00000009902	safb	67	44.724	ENSMICG00000008739	-	93	43.388	Microcebus_murinus
ENSPKIG00000009902	safb	97	45.503	ENSMODG00000001236	SAFB	97	42.456	Monodelphis_domestica
ENSPKIG00000009902	safb	99	63.039	ENSMALG00000020330	safb	99	63.039	Monopterus_albus
ENSPKIG00000009902	safb	87	41.379	ENSMPUG00000006123	SAFB	91	43.770	Mustela_putorius_furo
ENSPKIG00000009902	safb	98	44.201	ENSMLUG00000001081	SAFB	90	43.003	Myotis_lucifugus
ENSPKIG00000009902	safb	94	46.111	ENSNLEG00000013551	SAFB	97	43.435	Nomascus_leucogenys
ENSPKIG00000009902	safb	61	41.319	ENSOPRG00000011561	-	95	41.320	Ochotona_princeps
ENSPKIG00000009902	safb	85	41.126	ENSODEG00000014838	SAFB	95	42.150	Octodon_degus
ENSPKIG00000009902	safb	99	62.065	ENSONIG00000002318	safb	99	61.883	Oreochromis_niloticus
ENSPKIG00000009902	safb	89	39.571	ENSOCUG00000014628	SAFB	62	41.667	Oryctolagus_cuniculus
ENSPKIG00000009902	safb	98	59.885	ENSORLG00000016989	safb	99	57.517	Oryzias_latipes
ENSPKIG00000009902	safb	98	52.787	ENSORLG00020000404	safb	99	53.272	Oryzias_latipes_hni
ENSPKIG00000009902	safb	98	59.170	ENSORLG00015010733	safb	99	57.534	Oryzias_latipes_hsok
ENSPKIG00000009902	safb	99	60.068	ENSOMEG00000009066	safb	99	59.389	Oryzias_melastigma
ENSPKIG00000009902	safb	66	45.513	ENSOGAG00000027769	SAFB	89	44.240	Otolemur_garnettii
ENSPKIG00000009902	safb	98	42.072	ENSOARG00000007662	-	90	41.984	Ovis_aries
ENSPKIG00000009902	safb	82	40.726	ENSOARG00000007856	-	99	39.323	Ovis_aries
ENSPKIG00000009902	safb	67	45.840	ENSPPAG00000035129	SAFB	95	43.026	Pan_paniscus
ENSPKIG00000009902	safb	87	42.857	ENSPPRG00000017197	SAFB	99	42.989	Panthera_pardus
ENSPKIG00000009902	safb	67	45.840	ENSPTRG00000010335	SAFB	95	43.026	Pan_troglodytes
ENSPKIG00000009902	safb	67	45.597	ENSPANG00000007770	SAFB	95	43.194	Papio_anubis
ENSPKIG00000009902	safb	99	47.893	ENSPSIG00000009367	-	98	46.901	Pelodiscus_sinensis
ENSPKIG00000009902	safb	100	47.919	ENSPSIG00000011679	-	99	49.079	Pelodiscus_sinensis
ENSPKIG00000009902	safb	57	50.471	ENSPCIG00000009504	-	96	48.031	Phascolarctos_cinereus
ENSPKIG00000009902	safb	99	55.950	ENSPFOG00000007745	safb	99	55.086	Poecilia_formosa
ENSPKIG00000009902	safb	99	54.015	ENSPLAG00000001614	safb	99	52.909	Poecilia_latipinna
ENSPKIG00000009902	safb	99	55.835	ENSPMEG00000021023	safb	99	54.971	Poecilia_mexicana
ENSPKIG00000009902	safb	99	54.730	ENSPREG00000012496	safb	99	54.556	Poecilia_reticulata
ENSPKIG00000009902	safb	67	46.226	ENSPPYG00000009428	SAFB	95	43.011	Pongo_abelii
ENSPKIG00000009902	safb	93	40.863	ENSPCAG00000006475	SAFB	93	40.632	Procavia_capensis
ENSPKIG00000009902	safb	95	43.578	ENSPCOG00000014090	SAFB	64	45.336	Propithecus_coquereli
ENSPKIG00000009902	safb	95	42.261	ENSPVAG00000004913	SAFB	95	38.710	Pteropus_vampyrus
ENSPKIG00000009902	safb	100	66.779	ENSPNAG00000021838	safb	100	68.136	Pygocentrus_nattereri
ENSPKIG00000009902	safb	67	43.851	ENSRBIG00000042509	SAFB	67	63.889	Rhinopithecus_bieti
ENSPKIG00000009902	safb	67	45.997	ENSRROG00000029278	SAFB	90	44.444	Rhinopithecus_roxellana
ENSPKIG00000009902	safb	67	45.984	ENSSBOG00000026291	SAFB	95	43.026	Saimiri_boliviensis_boliviensis
ENSPKIG00000009902	safb	100	83.447	ENSSFOG00015008156	safb	100	83.447	Scleropages_formosus
ENSPKIG00000009902	safb	99	64.619	ENSSMAG00000009316	safb	99	64.018	Scophthalmus_maximus
ENSPKIG00000009902	safb	99	62.486	ENSSDUG00000009652	safb	99	62.116	Seriola_dumerili
ENSPKIG00000009902	safb	99	64.846	ENSSLDG00000001670	safb	99	64.472	Seriola_lalandi_dorsalis
ENSPKIG00000009902	safb	57	45.489	ENSSPUG00000009820	-	97	48.020	Sphenodon_punctatus
ENSPKIG00000009902	safb	59	43.682	ENSSPUG00000009747	-	95	43.711	Sphenodon_punctatus
ENSPKIG00000009902	safb	98	60.507	ENSSPAG00000015682	safb	99	60.990	Stegastes_partitus
ENSPKIG00000009902	safb	95	44.194	ENSSSCG00000013522	SAFB	99	42.944	Sus_scrofa
ENSPKIG00000009902	safb	65	46.117	ENSTGUG00000000502	-	96	47.603	Taeniopygia_guttata
ENSPKIG00000009902	safb	67	47.393	ENSTGUG00000000489	-	99	51.482	Taeniopygia_guttata
ENSPKIG00000009902	safb	99	61.187	ENSTRUG00000003567	safb	99	61.644	Takifugu_rubripes
ENSPKIG00000009902	safb	91	54.708	ENSTNIG00000015470	safb	100	55.476	Tetraodon_nigroviridis
ENSPKIG00000009902	safb	79	73.684	ENSTTRG00000013588	SAFB	85	73.684	Tursiops_truncatus
ENSPKIG00000009902	safb	74	44.000	ENSUMAG00000009734	SAFB	85	44.663	Ursus_maritimus
ENSPKIG00000009902	safb	87	41.810	ENSVVUG00000013720	SAFB	80	43.107	Vulpes_vulpes
ENSPKIG00000009902	safb	67	44.071	ENSXETG00000008755	safb	99	45.717	Xenopus_tropicalis
ENSPKIG00000009902	safb	99	56.567	ENSXMAG00000003458	safb	99	55.886	Xiphophorus_maculatus