EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000010578 (Gene tree)
Gene ID: 111839722
Gene Symbol: pum1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 19585 bases
Position: chrPGUA01000073.1:163857-183441
Accession: 111839722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	1	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	2	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	3	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	4	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	5	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	6	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	7	8
ENSPKIP00000029371	PUF	PF00806.19	1.4e-71	8	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	1	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	2	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	3	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	4	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	5	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	6	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	7	8
ENSPKIP00000029315	PUF	PF00806.19	1.2e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000010168	-	3309	-	ENSPKIP00000029371	1102 (aa)	-	-
ENSPKIT00000010110	-	7080	-	ENSPKIP00000029315	1183 (aa)	XP_023659694	UPI000CD5DDB2

Gene Model

Click here to download ENSPKIG00000010578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000010578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000010578	pum1	89	60.137	ENSPKIG00000023195	pum2	100	62.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000010578	pum1	100	78.383	ENSG00000134644	PUM1	94	93.932	Homo_sapiens
ENSPKIG00000010578	pum1	100	76.853	ENSAPOG00000021632	pum1	95	92.530	Acanthochromis_polyacanthus
ENSPKIG00000010578	pum1	100	93.478	ENSAMEG00000017656	PUM1	91	93.478	Ailuropoda_melanoleuca
ENSPKIG00000010578	pum1	100	75.917	ENSACIG00000021013	pum1	95	92.530	Amphilophus_citrinellus
ENSPKIG00000010578	pum1	100	76.853	ENSAOCG00000003944	pum1	100	92.530	Amphiprion_ocellaris
ENSPKIG00000010578	pum1	100	76.853	ENSAPEG00000014550	pum1	100	92.530	Amphiprion_percula
ENSPKIG00000010578	pum1	100	77.186	ENSATEG00000016004	pum1	100	92.530	Anabas_testudineus
ENSPKIG00000010578	pum1	100	78.318	ENSAPLG00000009351	PUM1	100	78.660	Anas_platyrhynchos
ENSPKIG00000010578	pum1	100	78.182	ENSACAG00000000682	PUM1	92	93.720	Anolis_carolinensis
ENSPKIG00000010578	pum1	100	78.299	ENSANAG00000027865	PUM1	100	82.742	Aotus_nancymaae
ENSPKIG00000010578	pum1	90	78.085	ENSACLG00000019354	pum1	95	92.530	Astatotilapia_calliptera
ENSPKIG00000010578	pum1	100	80.034	ENSAMXG00000020607	pum1	96	79.449	Astyanax_mexicanus
ENSPKIG00000010578	pum1	93	93.961	ENSBTAG00000018979	PUM1	100	82.396	Bos_taurus
ENSPKIG00000010578	pum1	93	93.478	ENSCJAG00000006035	PUM1	95	93.478	Callithrix_jacchus
ENSPKIG00000010578	pum1	100	77.667	ENSCAFG00000011205	PUM1	100	78.091	Canis_familiaris
ENSPKIG00000010578	pum1	92	79.276	ENSCAFG00020024616	PUM1	98	82.742	Canis_lupus_dingo
ENSPKIG00000010578	pum1	93	93.478	ENSCHIG00000012952	PUM1	100	79.239	Capra_hircus
ENSPKIG00000010578	pum1	100	78.401	ENSTSYG00000008868	PUM1	100	82.864	Carlito_syrichta
ENSPKIG00000010578	pum1	100	78.153	ENSCPOG00000031613	PUM1	100	82.619	Cavia_porcellus
ENSPKIG00000010578	pum1	84	93.961	ENSCATG00000017991	PUM1	94	93.932	Cercocebus_atys
ENSPKIG00000010578	pum1	100	78.071	ENSCLAG00000007662	PUM1	100	82.497	Chinchilla_lanigera
ENSPKIG00000010578	pum1	100	77.288	ENSCSAG00000001028	PUM1	100	77.705	Chlorocebus_sabaeus
ENSPKIG00000010578	pum1	99	68.985	ENSCHOG00000010245	PUM1	93	67.413	Choloepus_hoffmanni
ENSPKIG00000010578	pum1	93	93.961	ENSCPBG00000009288	PUM1	95	93.961	Chrysemys_picta_bellii
ENSPKIG00000010578	pum1	100	78.383	ENSCANG00000042606	PUM1	94	93.932	Colobus_angolensis_palliatus
ENSPKIG00000010578	pum1	100	77.704	ENSCGRG00001024949	Pum1	100	82.353	Cricetulus_griseus_chok1gshd
ENSPKIG00000010578	pum1	100	77.704	ENSCGRG00000014197	Pum1	100	82.353	Cricetulus_griseus_crigri
ENSPKIG00000010578	pum1	90	76.449	ENSCSEG00000015981	pum1	95	92.978	Cynoglossus_semilaevis
ENSPKIG00000010578	pum1	100	76.833	ENSCVAG00000007043	pum1	95	92.771	Cyprinodon_variegatus
ENSPKIG00000010578	pum1	100	78.523	ENSDARG00000099256	pum1	100	79.614	Danio_rerio
ENSPKIG00000010578	pum1	100	78.730	ENSDNOG00000010939	PUM1	100	78.577	Dasypus_novemcinctus
ENSPKIG00000010578	pum1	84	92.995	ENSDORG00000001875	Pum1	100	79.742	Dipodomys_ordii
ENSPKIG00000010578	pum1	90	81.402	ENSETEG00000004355	PUM1	82	81.402	Echinops_telfairi
ENSPKIG00000010578	pum1	100	78.218	ENSEASG00005010813	PUM1	100	78.560	Equus_asinus_asinus
ENSPKIG00000010578	pum1	100	78.071	ENSECAG00000021369	PUM1	95	92.995	Equus_caballus
ENSPKIG00000010578	pum1	78	93.237	ENSEEUG00000003871	PUM1	74	93.333	Erinaceus_europaeus
ENSPKIG00000010578	pum1	100	81.346	ENSELUG00000002409	pum1	95	94.686	Esox_lucius
ENSPKIG00000010578	pum1	100	78.236	ENSFCAG00000010374	PUM1	100	82.742	Felis_catus
ENSPKIG00000010578	pum1	100	83.300	ENSFALG00000001214	PUM1	93	93.720	Ficedula_albicollis
ENSPKIG00000010578	pum1	100	77.906	ENSFDAG00000011319	PUM1	94	93.447	Fukomys_damarensis
ENSPKIG00000010578	pum1	95	84.926	ENSGMOG00000010491	pum1	94	92.289	Gadus_morhua
ENSPKIG00000010578	pum1	93	92.308	ENSGALG00000042598	PUM1	99	92.308	Gallus_gallus
ENSPKIG00000010578	pum1	100	76.853	ENSGAFG00000015617	pum1	100	92.771	Gambusia_affinis
ENSPKIG00000010578	pum1	100	84.713	ENSGACG00000005717	pum1	95	92.048	Gasterosteus_aculeatus
ENSPKIG00000010578	pum1	93	92.510	ENSGAGG00000001290	PUM1	99	92.510	Gopherus_agassizii
ENSPKIG00000010578	pum1	100	78.383	ENSGGOG00000011983	PUM1	94	93.932	Gorilla_gorilla
ENSPKIG00000010578	pum1	100	77.186	ENSHBUG00000018718	pum1	95	92.530	Haplochromis_burtoni
ENSPKIG00000010578	pum1	100	78.017	ENSHGLG00000013819	Pum1	100	82.252	Heterocephalus_glaber_female
ENSPKIG00000010578	pum1	100	78.017	ENSHGLG00100008621	Pum1	100	82.252	Heterocephalus_glaber_male
ENSPKIG00000010578	pum1	90	75.046	ENSHCOG00000005149	pum1	92	95.304	Hippocampus_comes
ENSPKIG00000010578	pum1	100	79.215	ENSIPUG00000020421	pum1	93	93.237	Ictalurus_punctatus
ENSPKIG00000010578	pum1	100	78.135	ENSSTOG00000010757	PUM1	100	82.497	Ictidomys_tridecemlineatus
ENSPKIG00000010578	pum1	100	77.970	ENSJJAG00000000530	Pum1	94	93.204	Jaculus_jaculus
ENSPKIG00000010578	pum1	100	76.853	ENSKMAG00000003481	pum1	95	92.289	Kryptolebias_marmoratus
ENSPKIG00000010578	pum1	100	76.333	ENSLBEG00000002527	pum1	95	92.530	Labrus_bergylta
ENSPKIG00000010578	pum1	100	76.116	ENSLACG00000017188	PUM1	99	76.612	Latimeria_chalumnae
ENSPKIG00000010578	pum1	100	83.541	ENSLOCG00000005210	pum1	99	84.123	Lepisosteus_oculatus
ENSPKIG00000010578	pum1	100	78.071	ENSLAFG00000003178	PUM1	100	78.164	Loxodonta_africana
ENSPKIG00000010578	pum1	100	78.230	ENSMFAG00000010291	PUM1	94	93.932	Macaca_fascicularis
ENSPKIG00000010578	pum1	100	78.092	ENSMMUG00000013520	PUM1	94	93.932	Macaca_mulatta
ENSPKIG00000010578	pum1	100	78.383	ENSMNEG00000034639	PUM1	94	93.932	Macaca_nemestrina
ENSPKIG00000010578	pum1	100	78.383	ENSMLEG00000038743	PUM1	94	93.932	Mandrillus_leucophaeus
ENSPKIG00000010578	pum1	100	77.269	ENSMAMG00000011606	pum1	100	79.052	Mastacembelus_armatus
ENSPKIG00000010578	pum1	100	77.186	ENSMZEG00005005834	pum1	95	92.530	Maylandia_zebra
ENSPKIG00000010578	pum1	100	83.099	ENSMGAG00000000724	PUM1	95	93.720	Meleagris_gallopavo
ENSPKIG00000010578	pum1	100	77.640	ENSMAUG00000022090	Pum1	100	81.985	Mesocricetus_auratus
ENSPKIG00000010578	pum1	100	82.696	ENSMICG00000007713	-	95	93.478	Microcebus_murinus
ENSPKIG00000010578	pum1	99	90.777	ENSMICG00000012213	-	94	90.777	Microcebus_murinus
ENSPKIG00000010578	pum1	100	78.081	ENSMOCG00000015463	Pum1	100	82.353	Microtus_ochrogaster
ENSPKIG00000010578	pum1	84	93.976	ENSMMOG00000019817	pum1	100	93.976	Mola_mola
ENSPKIG00000010578	pum1	100	78.512	ENSMODG00000017067	PUM1	100	78.843	Monodelphis_domestica
ENSPKIG00000010578	pum1	84	92.289	ENSMALG00000016399	pum1	100	92.530	Monopterus_albus
ENSPKIG00000010578	pum1	100	77.888	MGP_CAROLIEiJ_G0026549	Pum1	100	82.375	Mus_caroli
ENSPKIG00000010578	pum1	100	77.888	ENSMUSG00000028580	Pum1	100	82.252	Mus_musculus
ENSPKIG00000010578	pum1	100	77.805	MGP_PahariEiJ_G0028881	Pum1	100	82.252	Mus_pahari
ENSPKIG00000010578	pum1	100	77.805	MGP_SPRETEiJ_G0027529	Pum1	100	82.130	Mus_spretus
ENSPKIG00000010578	pum1	100	78.383	ENSMPUG00000015454	PUM1	100	78.725	Mustela_putorius_furo
ENSPKIG00000010578	pum1	100	78.153	ENSMLUG00000006490	PUM1	100	78.246	Myotis_lucifugus
ENSPKIG00000010578	pum1	100	78.300	ENSNGAG00000002378	Pum1	100	82.497	Nannospalax_galili
ENSPKIG00000010578	pum1	79	82.331	ENSNBRG00000010689	pum1	94	92.978	Neolamprologus_brichardi
ENSPKIG00000010578	pum1	93	89.855	ENSNLEG00000001151	PUM1	94	90.291	Nomascus_leucogenys
ENSPKIG00000010578	pum1	72	90.909	ENSMEUG00000000976	-	72	90.909	Notamacropus_eugenii
ENSPKIG00000010578	pum1	87	91.589	ENSOPRG00000001776	PUM1	75	91.589	Ochotona_princeps
ENSPKIG00000010578	pum1	100	78.329	ENSODEG00000003465	PUM1	100	82.497	Octodon_degus
ENSPKIG00000010578	pum1	100	76.769	ENSONIG00000002290	pum1	95	92.289	Oreochromis_niloticus
ENSPKIG00000010578	pum1	84	65.392	ENSOANG00000004902	-	100	64.659	Ornithorhynchus_anatinus
ENSPKIG00000010578	pum1	99	77.704	ENSOCUG00000008641	PUM1	99	78.045	Oryctolagus_cuniculus
ENSPKIG00000010578	pum1	100	77.261	ENSORLG00000011482	pum1	94	92.530	Oryzias_latipes
ENSPKIG00000010578	pum1	100	77.178	ENSORLG00020019461	pum1	95	92.530	Oryzias_latipes_hni
ENSPKIG00000010578	pum1	100	77.178	ENSORLG00015011375	pum1	95	92.530	Oryzias_latipes_hsok
ENSPKIG00000010578	pum1	84	92.048	ENSOMEG00000009312	pum1	100	92.289	Oryzias_melastigma
ENSPKIG00000010578	pum1	100	76.353	ENSOGAG00000011063	PUM1	95	85.817	Otolemur_garnettii
ENSPKIG00000010578	pum1	93	93.478	ENSOARG00000001899	PUM1	100	78.191	Ovis_aries
ENSPKIG00000010578	pum1	100	78.383	ENSPPAG00000044003	PUM1	94	93.932	Pan_paniscus
ENSPKIG00000010578	pum1	100	78.300	ENSPPRG00000001370	PUM1	100	82.742	Panthera_pardus
ENSPKIG00000010578	pum1	100	78.135	ENSPTIG00000010798	PUM1	100	82.497	Panthera_tigris_altaica
ENSPKIG00000010578	pum1	100	78.383	ENSPTRG00000000453	PUM1	94	93.932	Pan_troglodytes
ENSPKIG00000010578	pum1	100	78.383	ENSPANG00000016338	PUM1	94	93.932	Papio_anubis
ENSPKIG00000010578	pum1	100	83.300	ENSPSIG00000014118	PUM1	95	93.961	Pelodiscus_sinensis
ENSPKIG00000010578	pum1	78	85.501	ENSPMGG00000005836	pum1	90	92.978	Periophthalmus_magnuspinnatus
ENSPKIG00000010578	pum1	100	77.723	ENSPEMG00000010009	Pum1	100	81.985	Peromyscus_maniculatus_bairdii
ENSPKIG00000010578	pum1	93	93.720	ENSPCIG00000014151	PUM1	100	83.007	Phascolarctos_cinereus
ENSPKIG00000010578	pum1	94	85.350	ENSPFOG00000007289	pum1	95	92.771	Poecilia_formosa
ENSPKIG00000010578	pum1	100	85.350	ENSPLAG00000007256	pum1	95	92.771	Poecilia_latipinna
ENSPKIG00000010578	pum1	91	79.285	ENSPMEG00000019543	pum1	94	92.771	Poecilia_mexicana
ENSPKIG00000010578	pum1	100	77.935	ENSPREG00000005195	pum1	95	92.771	Poecilia_reticulata
ENSPKIG00000010578	pum1	100	82.696	ENSPPYG00000001621	PUM1	96	93.478	Pongo_abelii
ENSPKIG00000010578	pum1	83	92.901	ENSPCAG00000001979	PUM1	74	93.519	Procavia_capensis
ENSPKIG00000010578	pum1	100	82.696	ENSPCOG00000004398	PUM1	95	93.478	Propithecus_coquereli
ENSPKIG00000010578	pum1	100	76.403	ENSPVAG00000005207	PUM1	97	76.738	Pteropus_vampyrus
ENSPKIG00000010578	pum1	100	77.269	ENSPNYG00000009518	pum1	95	92.530	Pundamilia_nyererei
ENSPKIG00000010578	pum1	100	80.872	ENSPNAG00000026728	pum1	95	93.720	Pygocentrus_nattereri
ENSPKIG00000010578	pum1	100	77.970	ENSRNOG00000011709	Pum1	100	78.311	Rattus_norvegicus
ENSPKIG00000010578	pum1	100	78.383	ENSRBIG00000042521	PUM1	94	93.932	Rhinopithecus_bieti
ENSPKIG00000010578	pum1	100	78.383	ENSRROG00000020156	PUM1	94	93.932	Rhinopithecus_roxellana
ENSPKIG00000010578	pum1	100	78.401	ENSSBOG00000032037	PUM1	100	82.864	Saimiri_boliviensis_boliviensis
ENSPKIG00000010578	pum1	100	78.347	ENSSHAG00000010918	PUM1	100	78.678	Sarcophilus_harrisii
ENSPKIG00000010578	pum1	100	85.138	ENSSMAG00000010918	pum1	100	92.530	Scophthalmus_maximus
ENSPKIG00000010578	pum1	100	77.519	ENSSDUG00000009021	pum1	95	92.530	Seriola_dumerili
ENSPKIG00000010578	pum1	95	77.926	ENSSLDG00000009667	pum1	95	92.530	Seriola_lalandi_dorsalis
ENSPKIG00000010578	pum1	94	79.801	ENSSARG00000003055	PUM1	91	80.684	Sorex_araneus
ENSPKIG00000010578	pum1	100	78.300	ENSSPUG00000006267	PUM1	100	78.560	Sphenodon_punctatus
ENSPKIG00000010578	pum1	100	76.853	ENSSPAG00000016636	pum1	100	92.530	Stegastes_partitus
ENSPKIG00000010578	pum1	100	91.296	ENSSSCG00000003591	PUM1	88	93.932	Sus_scrofa
ENSPKIG00000010578	pum1	100	77.000	ENSTRUG00000013121	pum1	95	92.530	Takifugu_rubripes
ENSPKIG00000010578	pum1	100	76.936	ENSTNIG00000016983	pum1	99	79.101	Tetraodon_nigroviridis
ENSPKIG00000010578	pum1	92	79.837	ENSTTRG00000007436	PUM1	89	80.217	Tursiops_truncatus
ENSPKIG00000010578	pum1	99	76.625	ENSUAMG00000018262	-	100	76.993	Ursus_americanus
ENSPKIG00000010578	pum1	100	77.935	ENSUMAG00000009211	PUM1	100	79.306	Ursus_maritimus
ENSPKIG00000010578	pum1	92	82.619	ENSVPAG00000005902	PUM1	92	83.109	Vicugna_pacos
ENSPKIG00000010578	pum1	100	78.236	ENSVVUG00000014631	PUM1	100	79.569	Vulpes_vulpes
ENSPKIG00000010578	pum1	100	74.691	ENSXETG00000012904	pum1	99	74.711	Xenopus_tropicalis
ENSPKIG00000010578	pum1	100	76.500	ENSXMAG00000002945	pum1	100	79.713	Xiphophorus_maculatus