EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000011201 (Gene tree)
Gene ID: 111860268
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 15871 bases
Position: chrPGUA01000112.1:1641202-1657072
Accession: 111860268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000030374	RRM_4	PF10598.9	4.8e-48	1	1
ENSPKIP00000030374	U5_2-snRNA_bdg	PF10597.9	9.3e-74	1	1
ENSPKIP00000030374	PRO8NT	PF08082.11	7.8e-87	1	1
ENSPKIP00000030374	U6-snRNA_bdg	PF10596.9	2.3e-89	1	1
ENSPKIP00000030374	PROCN	PF08083.11	6.3e-236	1	1
ENSPKIP00000030374	PRP8_domainIV	PF12134.8	5.3e-130	1	1
ENSPKIP00000030374	PROCT	PF08084.11	1.7e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000011190	-	9801	-	ENSPKIP00000030374	2346 (aa)	XP_023699563	UPI000CD5F13B

Gene Model

Click here to download ENSPKIG00000011201's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000011201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000011201	prpf8	100	97.319	ENSG00000174231	PRPF8	100	97.319	Homo_sapiens
ENSPKIG00000011201	prpf8	100	98.764	ENSAPOG00000010079	prpf8	100	98.764	Acanthochromis_polyacanthus
ENSPKIG00000011201	prpf8	100	97.319	ENSAMEG00000007940	PRPF8	100	97.319	Ailuropoda_melanoleuca
ENSPKIG00000011201	prpf8	100	97.240	ENSACIG00000018280	prpf8	100	97.240	Amphilophus_citrinellus
ENSPKIG00000011201	prpf8	100	98.764	ENSAOCG00000010725	prpf8	100	98.764	Amphiprion_ocellaris
ENSPKIG00000011201	prpf8	100	98.764	ENSAPEG00000014397	prpf8	100	98.764	Amphiprion_percula
ENSPKIG00000011201	prpf8	100	97.869	ENSATEG00000010062	prpf8	100	97.869	Anabas_testudineus
ENSPKIG00000011201	prpf8	96	98.443	ENSAPLG00000010357	PRPF8	100	98.443	Anas_platyrhynchos
ENSPKIG00000011201	prpf8	82	96.089	ENSACAG00000014784	PRPF8	99	96.089	Anolis_carolinensis
ENSPKIG00000011201	prpf8	100	97.319	ENSANAG00000032629	PRPF8	100	97.319	Aotus_nancymaae
ENSPKIG00000011201	prpf8	100	98.596	ENSACLG00000020858	prpf8	100	98.596	Astatotilapia_calliptera
ENSPKIG00000011201	prpf8	100	98.338	ENSAMXG00000020291	prpf8	100	98.338	Astyanax_mexicanus
ENSPKIG00000011201	prpf8	100	97.319	ENSBTAG00000011488	PRPF8	100	97.319	Bos_taurus
ENSPKIG00000011201	prpf8	99	86.618	WBGene00004187	prp-8	99	86.704	Caenorhabditis_elegans
ENSPKIG00000011201	prpf8	100	97.319	ENSCJAG00000001911	PRPF8	100	97.319	Callithrix_jacchus
ENSPKIG00000011201	prpf8	100	97.319	ENSCAFG00000019221	PRPF8	100	97.319	Canis_familiaris
ENSPKIG00000011201	prpf8	96	98.349	ENSCAFG00020009943	PRPF8	100	98.349	Canis_lupus_dingo
ENSPKIG00000011201	prpf8	100	97.319	ENSCHIG00000017499	PRPF8	100	97.319	Capra_hircus
ENSPKIG00000011201	prpf8	100	97.319	ENSTSYG00000014120	PRPF8	100	97.319	Carlito_syrichta
ENSPKIG00000011201	prpf8	96	96.125	ENSCAPG00000009459	PRPF8	99	96.125	Cavia_aperea
ENSPKIG00000011201	prpf8	100	97.319	ENSCPOG00000010379	PRPF8	100	97.319	Cavia_porcellus
ENSPKIG00000011201	prpf8	100	97.319	ENSCCAG00000031983	-	100	97.319	Cebus_capucinus
ENSPKIG00000011201	prpf8	100	97.319	ENSCATG00000038595	PRPF8	100	97.319	Cercocebus_atys
ENSPKIG00000011201	prpf8	100	97.319	ENSCLAG00000004388	PRPF8	100	97.319	Chinchilla_lanigera
ENSPKIG00000011201	prpf8	100	97.319	ENSCSAG00000013929	PRPF8	100	97.319	Chlorocebus_sabaeus
ENSPKIG00000011201	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSPKIG00000011201	prpf8	100	97.571	ENSCPBG00000020409	PRPF8	100	97.571	Chrysemys_picta_bellii
ENSPKIG00000011201	prpf8	98	93.112	ENSCSAVG00000007825	-	100	91.366	Ciona_savignyi
ENSPKIG00000011201	prpf8	100	97.319	ENSCANG00000043088	PRPF8	100	97.319	Colobus_angolensis_palliatus
ENSPKIG00000011201	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSPKIG00000011201	prpf8	100	98.465	ENSCSEG00000007905	prpf8	100	98.465	Cynoglossus_semilaevis
ENSPKIG00000011201	prpf8	100	98.508	ENSDARG00000026180	prpf8	100	98.508	Danio_rerio
ENSPKIG00000011201	prpf8	93	97.439	ENSDNOG00000018471	PRPF8	99	97.439	Dasypus_novemcinctus
ENSPKIG00000011201	prpf8	84	95.787	ENSDORG00000006185	Prpf8	96	95.787	Dipodomys_ordii
ENSPKIG00000011201	prpf8	99	91.243	FBgn0033688	Prp8	97	91.724	Drosophila_melanogaster
ENSPKIG00000011201	prpf8	100	91.957	ENSETEG00000017592	PRPF8	100	91.957	Echinops_telfairi
ENSPKIG00000011201	prpf8	99	93.236	ENSEBUG00000006548	prpf8	99	93.236	Eptatretus_burgeri
ENSPKIG00000011201	prpf8	100	97.319	ENSEASG00005009514	PRPF8	99	98.675	Equus_asinus_asinus
ENSPKIG00000011201	prpf8	97	98.374	ENSECAG00000021318	PRPF8	100	98.374	Equus_caballus
ENSPKIG00000011201	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSPKIG00000011201	prpf8	98	97.343	ENSELUG00000007120	prpf8	99	97.343	Esox_lucius
ENSPKIG00000011201	prpf8	100	97.319	ENSFCAG00000006297	PRPF8	100	97.319	Felis_catus
ENSPKIG00000011201	prpf8	100	97.657	ENSFALG00000006628	PRPF8	100	97.657	Ficedula_albicollis
ENSPKIG00000011201	prpf8	100	97.319	ENSFDAG00000004711	PRPF8	100	97.319	Fukomys_damarensis
ENSPKIG00000011201	prpf8	100	98.210	ENSFHEG00000021084	prpf8	100	98.210	Fundulus_heteroclitus
ENSPKIG00000011201	prpf8	100	96.332	ENSGMOG00000002028	prpf8	99	96.332	Gadus_morhua
ENSPKIG00000011201	prpf8	100	97.699	ENSGALG00000002943	PRPF8	100	97.699	Gallus_gallus
ENSPKIG00000011201	prpf8	99	98.375	ENSGAFG00000010337	prpf8	99	98.375	Gambusia_affinis
ENSPKIG00000011201	prpf8	100	98.551	ENSGACG00000008504	prpf8	100	98.335	Gasterosteus_aculeatus
ENSPKIG00000011201	prpf8	100	97.614	ENSGAGG00000008350	PRPF8	100	97.614	Gopherus_agassizii
ENSPKIG00000011201	prpf8	100	97.319	ENSGGOG00000005516	PRPF8	100	97.319	Gorilla_gorilla
ENSPKIG00000011201	prpf8	100	98.423	ENSHBUG00000016192	prpf8	100	98.423	Haplochromis_burtoni
ENSPKIG00000011201	prpf8	100	97.319	ENSHGLG00000012029	PRPF8	100	97.319	Heterocephalus_glaber_female
ENSPKIG00000011201	prpf8	100	97.319	ENSHGLG00100016494	PRPF8	100	97.319	Heterocephalus_glaber_male
ENSPKIG00000011201	prpf8	100	98.423	ENSHCOG00000016414	prpf8	100	98.423	Hippocampus_comes
ENSPKIG00000011201	prpf8	100	98.465	ENSIPUG00000023230	prpf8	100	98.465	Ictalurus_punctatus
ENSPKIG00000011201	prpf8	100	97.319	ENSSTOG00000005128	PRPF8	100	97.319	Ictidomys_tridecemlineatus
ENSPKIG00000011201	prpf8	100	95.191	ENSJJAG00000021159	Prpf8	100	95.191	Jaculus_jaculus
ENSPKIG00000011201	prpf8	99	98.416	ENSKMAG00000016118	prpf8	99	98.416	Kryptolebias_marmoratus
ENSPKIG00000011201	prpf8	100	98.295	ENSLBEG00000026903	prpf8	100	98.295	Labrus_bergylta
ENSPKIG00000011201	prpf8	95	95.285	ENSLACG00000010479	PRPF8	99	98.357	Latimeria_chalumnae
ENSPKIG00000011201	prpf8	99	98.466	ENSLOCG00000005409	prpf8	99	98.466	Lepisosteus_oculatus
ENSPKIG00000011201	prpf8	100	97.319	ENSLAFG00000015445	PRPF8	100	97.319	Loxodonta_africana
ENSPKIG00000011201	prpf8	100	97.319	ENSMFAG00000039995	PRPF8	100	97.319	Macaca_fascicularis
ENSPKIG00000011201	prpf8	100	97.319	ENSMMUG00000004820	PRPF8	100	97.319	Macaca_mulatta
ENSPKIG00000011201	prpf8	100	97.319	ENSMNEG00000035713	PRPF8	100	97.319	Macaca_nemestrina
ENSPKIG00000011201	prpf8	100	97.319	ENSMLEG00000037937	PRPF8	100	97.319	Mandrillus_leucophaeus
ENSPKIG00000011201	prpf8	100	98.551	ENSMAMG00000008919	prpf8	100	98.551	Mastacembelus_armatus
ENSPKIG00000011201	prpf8	100	98.596	ENSMZEG00005015073	prpf8	100	98.596	Maylandia_zebra
ENSPKIG00000011201	prpf8	100	97.699	ENSMGAG00000004769	PRPF8	100	97.699	Meleagris_gallopavo
ENSPKIG00000011201	prpf8	100	97.319	ENSMICG00000010320	PRPF8	100	97.319	Microcebus_murinus
ENSPKIG00000011201	prpf8	100	97.319	ENSMOCG00000016838	Prpf8	100	97.319	Microtus_ochrogaster
ENSPKIG00000011201	prpf8	100	98.082	ENSMMOG00000011887	prpf8	100	98.082	Mola_mola
ENSPKIG00000011201	prpf8	100	97.319	ENSMODG00000010480	PRPF8	100	97.319	Monodelphis_domestica
ENSPKIG00000011201	prpf8	97	98.170	ENSMALG00000003558	prpf8	100	98.170	Monopterus_albus
ENSPKIG00000011201	prpf8	100	97.277	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.277	Mus_caroli
ENSPKIG00000011201	prpf8	100	97.277	ENSMUSG00000020850	Prpf8	100	97.277	Mus_musculus
ENSPKIG00000011201	prpf8	100	97.234	MGP_PahariEiJ_G0017877	Prpf8	100	97.234	Mus_pahari
ENSPKIG00000011201	prpf8	100	97.277	MGP_SPRETEiJ_G0017583	Prpf8	100	97.277	Mus_spretus
ENSPKIG00000011201	prpf8	100	97.319	ENSMPUG00000013227	PRPF8	100	97.319	Mustela_putorius_furo
ENSPKIG00000011201	prpf8	100	97.195	ENSMLUG00000002666	PRPF8	100	97.195	Myotis_lucifugus
ENSPKIG00000011201	prpf8	100	95.574	ENSNGAG00000005305	Prpf8	100	95.574	Nannospalax_galili
ENSPKIG00000011201	prpf8	100	98.638	ENSNBRG00000013127	prpf8	100	98.638	Neolamprologus_brichardi
ENSPKIG00000011201	prpf8	97	96.885	ENSNLEG00000000897	PRPF8	98	96.885	Nomascus_leucogenys
ENSPKIG00000011201	prpf8	98	96.523	ENSMEUG00000015999	PRPF8	100	96.523	Notamacropus_eugenii
ENSPKIG00000011201	prpf8	100	95.574	ENSOPRG00000003102	PRPF8	100	95.532	Ochotona_princeps
ENSPKIG00000011201	prpf8	100	97.319	ENSODEG00000008468	PRPF8	100	97.319	Octodon_degus
ENSPKIG00000011201	prpf8	100	98.681	ENSONIG00000008153	prpf8	100	98.681	Oreochromis_niloticus
ENSPKIG00000011201	prpf8	82	99.252	ENSOANG00000004250	PRPF8	97	99.252	Ornithorhynchus_anatinus
ENSPKIG00000011201	prpf8	100	97.319	ENSOCUG00000000081	PRPF8	100	97.319	Oryctolagus_cuniculus
ENSPKIG00000011201	prpf8	100	98.003	ENSORLG00000008036	prpf8	100	98.003	Oryzias_latipes
ENSPKIG00000011201	prpf8	100	97.962	ENSORLG00020021070	prpf8	100	97.962	Oryzias_latipes_hni
ENSPKIG00000011201	prpf8	100	98.003	ENSORLG00015002340	prpf8	100	98.003	Oryzias_latipes_hsok
ENSPKIG00000011201	prpf8	100	96.389	ENSOMEG00000016866	prpf8	100	96.389	Oryzias_melastigma
ENSPKIG00000011201	prpf8	100	97.195	ENSOARG00000013312	PRPF8	100	97.195	Ovis_aries
ENSPKIG00000011201	prpf8	100	97.319	ENSPPAG00000042753	PRPF8	100	97.319	Pan_paniscus
ENSPKIG00000011201	prpf8	100	97.319	ENSPPRG00000008746	PRPF8	100	97.319	Panthera_pardus
ENSPKIG00000011201	prpf8	100	97.234	ENSPTIG00000019200	PRPF8	100	97.234	Panthera_tigris_altaica
ENSPKIG00000011201	prpf8	100	97.319	ENSPTRG00000039576	PRPF8	100	97.319	Pan_troglodytes
ENSPKIG00000011201	prpf8	98	98.349	ENSPANG00000024607	PRPF8	98	98.349	Papio_anubis
ENSPKIG00000011201	prpf8	100	97.529	ENSPSIG00000013393	PRPF8	100	97.529	Pelodiscus_sinensis
ENSPKIG00000011201	prpf8	100	97.319	ENSPEMG00000021699	Prpf8	100	97.319	Peromyscus_maniculatus_bairdii
ENSPKIG00000011201	prpf8	96	93.719	ENSPMAG00000005438	prpf8	100	93.764	Petromyzon_marinus
ENSPKIG00000011201	prpf8	100	97.319	ENSPCIG00000022603	PRPF8	100	98.349	Phascolarctos_cinereus
ENSPKIG00000011201	prpf8	100	98.092	ENSPFOG00000007005	prpf8	100	98.092	Poecilia_formosa
ENSPKIG00000011201	prpf8	100	96.846	ENSPLAG00000020777	prpf8	100	96.846	Poecilia_latipinna
ENSPKIG00000011201	prpf8	100	98.092	ENSPMEG00000004051	prpf8	100	98.092	Poecilia_mexicana
ENSPKIG00000011201	prpf8	100	98.295	ENSPREG00000021902	prpf8	100	98.295	Poecilia_reticulata
ENSPKIG00000011201	prpf8	100	97.319	ENSPPYG00000007777	PRPF8	100	97.319	Pongo_abelii
ENSPKIG00000011201	prpf8	90	97.030	ENSPCAG00000008938	PRPF8	90	97.030	Procavia_capensis
ENSPKIG00000011201	prpf8	100	97.319	ENSPCOG00000015182	PRPF8	100	97.319	Propithecus_coquereli
ENSPKIG00000011201	prpf8	93	98.780	ENSPVAG00000002134	PRPF8	93	98.780	Pteropus_vampyrus
ENSPKIG00000011201	prpf8	100	98.423	ENSPNYG00000016356	prpf8	100	98.423	Pundamilia_nyererei
ENSPKIG00000011201	prpf8	100	98.465	ENSPNAG00000009247	prpf8	100	98.465	Pygocentrus_nattereri
ENSPKIG00000011201	prpf8	100	97.277	ENSRNOG00000003495	Prpf8	100	97.277	Rattus_norvegicus
ENSPKIG00000011201	prpf8	100	97.319	ENSRBIG00000031219	PRPF8	100	97.903	Rhinopithecus_bieti
ENSPKIG00000011201	prpf8	100	97.319	ENSRROG00000038014	PRPF8	100	97.903	Rhinopithecus_roxellana
ENSPKIG00000011201	prpf8	98	62.473	YHR165C	PRP8	95	62.559	Saccharomyces_cerevisiae
ENSPKIG00000011201	prpf8	100	97.319	ENSSBOG00000029717	PRPF8	100	97.319	Saimiri_boliviensis_boliviensis
ENSPKIG00000011201	prpf8	100	97.277	ENSSHAG00000006167	PRPF8	100	97.277	Sarcophilus_harrisii
ENSPKIG00000011201	prpf8	100	98.849	ENSSFOG00015013905	prpf8	100	98.849	Scleropages_formosus
ENSPKIG00000011201	prpf8	100	98.465	ENSSMAG00000017736	prpf8	100	98.465	Scophthalmus_maximus
ENSPKIG00000011201	prpf8	100	98.636	ENSSDUG00000003029	prpf8	100	98.636	Seriola_dumerili
ENSPKIG00000011201	prpf8	68	99.562	ENSSLDG00000017096	prpf8	100	99.562	Seriola_lalandi_dorsalis
ENSPKIG00000011201	prpf8	87	94.626	ENSSARG00000002892	PRPF8	87	94.626	Sorex_araneus
ENSPKIG00000011201	prpf8	100	97.316	ENSSPUG00000007463	PRPF8	100	97.316	Sphenodon_punctatus
ENSPKIG00000011201	prpf8	100	98.167	ENSSPAG00000015639	prpf8	100	98.167	Stegastes_partitus
ENSPKIG00000011201	prpf8	100	97.319	ENSSSCG00000017817	PRPF8	100	97.319	Sus_scrofa
ENSPKIG00000011201	prpf8	51	99.127	ENSTGUG00000015597	-	95	99.127	Taeniopygia_guttata
ENSPKIG00000011201	prpf8	100	97.657	ENSTGUG00000005648	-	100	97.657	Taeniopygia_guttata
ENSPKIG00000011201	prpf8	100	98.124	ENSTRUG00000015906	prpf8	100	98.124	Takifugu_rubripes
ENSPKIG00000011201	prpf8	95	99.283	ENSTNIG00000003460	prpf8	99	99.283	Tetraodon_nigroviridis
ENSPKIG00000011201	prpf8	93	99.115	ENSTBEG00000006431	PRPF8	93	99.115	Tupaia_belangeri
ENSPKIG00000011201	prpf8	100	96.766	ENSTTRG00000006869	PRPF8	100	96.766	Tursiops_truncatus
ENSPKIG00000011201	prpf8	54	95.840	ENSUAMG00000015644	-	96	95.840	Ursus_americanus
ENSPKIG00000011201	prpf8	100	97.064	ENSUMAG00000009385	PRPF8	100	97.064	Ursus_maritimus
ENSPKIG00000011201	prpf8	71	98.621	ENSVPAG00000006063	-	71	98.621	Vicugna_pacos
ENSPKIG00000011201	prpf8	100	97.319	ENSVVUG00000021695	PRPF8	99	97.319	Vulpes_vulpes
ENSPKIG00000011201	prpf8	100	97.529	ENSXETG00000022259	prpf8	100	97.529	Xenopus_tropicalis
ENSPKIG00000011201	prpf8	100	98.380	ENSXCOG00000012775	prpf8	100	98.380	Xiphophorus_couchianus
ENSPKIG00000011201	prpf8	100	98.423	ENSXMAG00000008505	prpf8	100	98.423	Xiphophorus_maculatus