EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000011224 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1 (1 of many)
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 10990 bases
Position: chrPGUA01000190.1:944196-955185
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000030371	R3H	PF01424.22	2.7e-13	1	1
ENSPKIP00000030335	R3H	PF01424.22	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000011187	R3HDM1 (1 of many)-202	1266	-	ENSPKIP00000030371	421 (aa)	-	-
ENSPKIT00000011151	R3HDM1 (1 of many)-201	1673	-	ENSPKIP00000030335	488 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000011224's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000011224's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000011224	R3HDM1	80	56.757	ENSPKIG00000010891	ARPP21	54	55.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000011224	R3HDM1	93	63.366	ENSG00000048991	R3HDM1	99	66.316	Homo_sapiens
ENSPKIG00000011224	R3HDM1	81	53.241	ENSACIG00000018791	-	88	53.704	Amphilophus_citrinellus
ENSPKIG00000011224	R3HDM1	93	56.557	ENSACLG00000027282	r3hdm1	51	57.200	Astatotilapia_calliptera
ENSPKIG00000011224	R3HDM1	81	44.565	ENSAMXG00000020587	arpp21	55	41.403	Astyanax_mexicanus
ENSPKIG00000011224	R3HDM1	90	65.271	ENSCAFG00020016119	R3HDM1	82	63.920	Canis_lupus_dingo
ENSPKIG00000011224	R3HDM1	67	54.639	ENSCAPG00000013043	-	100	54.639	Cavia_aperea
ENSPKIG00000011224	R3HDM1	90	62.287	ENSCPOG00000012784	R3HDM1	100	64.605	Cavia_porcellus
ENSPKIG00000011224	R3HDM1	90	62.287	ENSCLAG00000007962	R3HDM1	100	64.605	Chinchilla_lanigera
ENSPKIG00000011224	R3HDM1	90	63.260	ENSCGRG00000012080	R3hdm1	100	65.862	Cricetulus_griseus_crigri
ENSPKIG00000011224	R3HDM1	79	42.748	ENSDARG00000061081	arpp21	54	40.657	Danio_rerio
ENSPKIG00000011224	R3HDM1	67	66.323	ENSDORG00000027689	-	100	66.323	Dipodomys_ordii
ENSPKIG00000011224	R3HDM1	86	46.392	ENSEBUG00000014746	arpp21	64	47.202	Eptatretus_burgeri
ENSPKIG00000011224	R3HDM1	90	64.878	ENSFDAG00000016478	R3HDM1	100	65.320	Fukomys_damarensis
ENSPKIG00000011224	R3HDM1	90	60.396	ENSHBUG00000015737	R3HDM1	80	60.706	Haplochromis_burtoni
ENSPKIG00000011224	R3HDM1	90	63.747	ENSHGLG00000015718	R3HDM1	100	66.667	Heterocephalus_glaber_female
ENSPKIG00000011224	R3HDM1	90	63.990	ENSHGLG00100003184	-	100	67.010	Heterocephalus_glaber_male
ENSPKIG00000011224	R3HDM1	52	63.415	ENSHCOG00000005036	-	58	56.604	Hippocampus_comes
ENSPKIG00000011224	R3HDM1	99	52.907	ENSHCOG00000013366	r3hdm1	86	60.102	Hippocampus_comes
ENSPKIG00000011224	R3HDM1	91	68.080	ENSIPUG00000001676	R3HDM1	55	63.477	Ictalurus_punctatus
ENSPKIG00000011224	R3HDM1	90	65.366	ENSSTOG00000007572	R3HDM1	100	66.897	Ictidomys_tridecemlineatus
ENSPKIG00000011224	R3HDM1	67	66.207	ENSJJAG00000018208	-	100	66.207	Jaculus_jaculus
ENSPKIG00000011224	R3HDM1	50	84.946	ENSKMAG00000013373	-	80	84.946	Kryptolebias_marmoratus
ENSPKIG00000011224	R3HDM1	88	59.300	ENSLBEG00000027981	-	99	59.737	Labrus_bergylta
ENSPKIG00000011224	R3HDM1	90	63.504	ENSMAUG00000010315	R3hdm1	100	65.862	Mesocricetus_auratus
ENSPKIG00000011224	R3HDM1	90	63.504	ENSMOCG00000019833	-	100	65.517	Microtus_ochrogaster
ENSPKIG00000011224	R3HDM1	90	63.504	MGP_CAROLIEiJ_G0014543	R3hdm1	100	66.207	Mus_caroli
ENSPKIG00000011224	R3HDM1	90	63.504	ENSMUSG00000056211	R3hdm1	100	66.207	Mus_musculus
ENSPKIG00000011224	R3HDM1	90	63.747	MGP_PahariEiJ_G0027779	R3hdm1	100	66.552	Mus_pahari
ENSPKIG00000011224	R3HDM1	90	63.504	MGP_SPRETEiJ_G0015350	R3hdm1	100	66.207	Mus_spretus
ENSPKIG00000011224	R3HDM1	67	65.979	ENSNGAG00000001313	-	100	65.979	Nannospalax_galili
ENSPKIG00000011224	R3HDM1	90	63.017	ENSODEG00000008607	R3HDM1	100	66.207	Octodon_degus
ENSPKIG00000011224	R3HDM1	83	63.636	ENSORLG00000004297	r3hdm1	50	58.761	Oryzias_latipes
ENSPKIG00000011224	R3HDM1	91	60.804	ENSORLG00020019252	-	92	62.363	Oryzias_latipes_hni
ENSPKIG00000011224	R3HDM1	79	65.988	ENSOMEG00000003882	-	78	62.857	Oryzias_melastigma
ENSPKIG00000011224	R3HDM1	83	53.653	ENSPMGG00000011264	-	91	54.110	Periophthalmus_magnuspinnatus
ENSPKIG00000011224	R3HDM1	90	63.017	ENSPEMG00000015187	R3hdm1	100	65.517	Peromyscus_maniculatus_bairdii
ENSPKIG00000011224	R3HDM1	90	59.606	ENSPREG00000007902	r3hdm1	92	58.957	Poecilia_reticulata
ENSPKIG00000011224	R3HDM1	91	60.442	ENSPNYG00000008701	-	98	60.741	Pundamilia_nyererei
ENSPKIG00000011224	R3HDM1	79	43.627	ENSPNAG00000004162	arpp21	54	42.453	Pygocentrus_nattereri
ENSPKIG00000011224	R3HDM1	90	76.607	ENSSFOG00015014134	r3hdm1	50	64.684	Scleropages_formosus
ENSPKIG00000011224	R3HDM1	90	67.726	ENSSFOG00015019851	-	57	60.413	Scleropages_formosus
ENSPKIG00000011224	R3HDM1	96	56.863	ENSSPAG00000004648	r3hdm1	51	57.255	Stegastes_partitus
ENSPKIG00000011224	R3HDM1	93	63.342	ENSUAMG00000024806	R3HDM1	81	63.453	Ursus_americanus
ENSPKIG00000011224	R3HDM1	90	61.369	ENSXETG00000019330	r3hdm1	56	55.009	Xenopus_tropicalis
ENSPKIG00000011224	R3HDM1	78	60.766	ENSXCOG00000017448	r3hdm1	57	60.179	Xiphophorus_couchianus
ENSPKIG00000011224	R3HDM1	91	58.368	ENSXMAG00000007885	r3hdm1	50	57.988	Xiphophorus_maculatus