EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000011324 (Gene tree)
Gene ID: 111842831
Gene Symbol: ddx39b
Alias: -
Full Name: spliceosome RNA helicase DDX39B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 9962 bases
Position: chrPGUA01000096.1:1684900-1694861
Accession: 111842831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000030493	ResIII	PF04851.15	1.8e-07	1	1
ENSPKIP00000030493	DEAD	PF00270.29	2.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000011314	-	1325	-	ENSPKIP00000030493	437 (aa)	XP_023665635	UPI000CD611E7

Gene Model

Click here to download ENSPKIG00000011324's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000011324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000011324	ddx39b	84	31.398	ENSPKIG00000008220	ddx19	82	31.398
ENSPKIG00000011324	ddx39b	85	37.197	ENSPKIG00000001167	eif4a1b	90	37.297
ENSPKIG00000011324	ddx39b	81	30.435	ENSPKIG00000006762	DDX5	59	30.435
ENSPKIG00000011324	ddx39b	85	30.052	ENSPKIG00000007704	DDX41	62	30.491
ENSPKIG00000011324	ddx39b	90	37.121	ENSPKIG00000013856	eif4a2	93	37.113
ENSPKIG00000011324	ddx39b	89	30.318	ENSPKIG00000003617	ddx3xa	66	30.318
ENSPKIG00000011324	ddx39b	100	85.584	ENSPKIG00000006284	DDX39A	100	85.584
ENSPKIG00000011324	ddx39b	83	38.082	ENSPKIG00000016912	eif4a3	90	37.838
ENSPKIG00000011324	ddx39b	84	31.300	ENSPKIG00000006013	ddx49	77	31.300
ENSPKIG00000011324	ddx39b	84	31.117	ENSPKIG00000002941	ddx43	53	31.383
ENSPKIG00000011324	ddx39b	100	86.270	ENSPKIG00000007272	-	100	86.270
ENSPKIG00000011324	ddx39b	87	36.579	ENSPKIG00000013728	ddx6	77	36.579
ENSPKIG00000011324	ddx39b	81	30.435	ENSPKIG00000007686	ddx5	57	30.435
ENSPKIG00000011324	ddx39b	95	31.517	ENSPKIG00000024264	ddx61	77	36.842
ENSPKIG00000011324	ddx39b	85	34.646	ENSPKIG00000020161	ddx20	52	34.646
ENSPKIG00000011324	ddx39b	79	34.870	ENSPKIG00000006718	ddx47	75	34.870
ENSPKIG00000011324	ddx39b	87	38.120	ENSPKIG00000022776	EIF4A2	91	38.120
ENSPKIG00000011324	ddx39b	92	36.908	ENSPKIG00000001467	eif4a1b	90	38.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000011324	ddx39b	100	91.304	ENSG00000198563	DDX39B	95	96.629	Homo_sapiens
ENSPKIG00000011324	ddx39b	100	91.533	ENSAMEG00000009508	DDX39B	99	91.076	Ailuropoda_melanoleuca
ENSPKIG00000011324	ddx39b	99	91.898	ENSACIG00000004534	ddx39b	98	92.361	Amphilophus_citrinellus
ENSPKIG00000011324	ddx39b	100	92.677	ENSATEG00000012366	ddx39b	100	92.449	Anabas_testudineus
ENSPKIG00000011324	ddx39b	100	91.096	ENSACAG00000012240	DDX39B	100	90.183	Anolis_carolinensis
ENSPKIG00000011324	ddx39b	100	91.304	ENSANAG00000030372	DDX39B	100	90.847	Aotus_nancymaae
ENSPKIG00000011324	ddx39b	99	91.055	ENSACLG00000018759	ddx39b	99	91.055	Astatotilapia_calliptera
ENSPKIG00000011324	ddx39b	100	96.339	ENSAMXG00000017837	ddx39b	100	96.339	Astyanax_mexicanus
ENSPKIG00000011324	ddx39b	100	91.533	ENSBTAG00000014490	DDX39B	100	90.847	Bos_taurus
ENSPKIG00000011324	ddx39b	100	91.304	ENSCJAG00000003152	DDX39B	100	90.847	Callithrix_jacchus
ENSPKIG00000011324	ddx39b	100	91.533	ENSCAFG00000000509	DDX39B	100	95.484	Canis_familiaris
ENSPKIG00000011324	ddx39b	100	91.533	ENSCAFG00020020530	DDX39B	100	90.847	Canis_lupus_dingo
ENSPKIG00000011324	ddx39b	100	91.533	ENSCHIG00000004579	DDX39B	100	90.847	Capra_hircus
ENSPKIG00000011324	ddx39b	100	78.947	ENSTSYG00000029741	-	88	82.073	Carlito_syrichta
ENSPKIG00000011324	ddx39b	100	91.304	ENSTSYG00000010226	-	100	90.847	Carlito_syrichta
ENSPKIG00000011324	ddx39b	100	91.304	ENSCAPG00000010066	DDX39B	100	90.618	Cavia_aperea
ENSPKIG00000011324	ddx39b	100	91.304	ENSCPOG00000002335	DDX39B	100	90.618	Cavia_porcellus
ENSPKIG00000011324	ddx39b	100	91.304	ENSCCAG00000027897	DDX39B	100	90.847	Cebus_capucinus
ENSPKIG00000011324	ddx39b	99	82.258	ENSCATG00000043709	DDX39B	99	81.567	Cercocebus_atys
ENSPKIG00000011324	ddx39b	100	91.304	ENSCLAG00000014555	DDX39B	100	90.618	Chinchilla_lanigera
ENSPKIG00000011324	ddx39b	99	91.244	ENSCSAG00000008517	DDX39B	100	90.553	Chlorocebus_sabaeus
ENSPKIG00000011324	ddx39b	62	95.604	ENSCPBG00000014671	-	100	95.604	Chrysemys_picta_bellii
ENSPKIG00000011324	ddx39b	100	91.304	ENSCANG00000041217	DDX39B	100	90.847	Colobus_angolensis_palliatus
ENSPKIG00000011324	ddx39b	58	87.008	ENSCGRG00001017315	-	95	83.256	Cricetulus_griseus_chok1gshd
ENSPKIG00000011324	ddx39b	82	80.447	ENSCGRG00001021916	-	89	80.447	Cricetulus_griseus_chok1gshd
ENSPKIG00000011324	ddx39b	58	87.008	ENSCGRG00000012479	-	76	85.827	Cricetulus_griseus_crigri
ENSPKIG00000011324	ddx39b	100	94.508	ENSDARG00000036069	ddx39b	100	94.508	Danio_rerio
ENSPKIG00000011324	ddx39b	100	91.304	ENSDNOG00000010215	DDX39B	100	90.847	Dasypus_novemcinctus
ENSPKIG00000011324	ddx39b	88	91.123	ENSDORG00000004985	Ddx39b	100	90.601	Dipodomys_ordii
ENSPKIG00000011324	ddx39b	88	78.851	ENSETEG00000009649	DDX39B	87	78.329	Echinops_telfairi
ENSPKIG00000011324	ddx39b	100	91.304	ENSEASG00005017156	DDX39B	100	90.847	Equus_asinus_asinus
ENSPKIG00000011324	ddx39b	100	91.304	ENSECAG00000007750	DDX39B	100	90.847	Equus_caballus
ENSPKIG00000011324	ddx39b	100	92.449	ENSELUG00000017904	ddx39b	100	91.991	Esox_lucius
ENSPKIG00000011324	ddx39b	100	91.533	ENSFCAG00000004497	DDX39B	100	91.076	Felis_catus
ENSPKIG00000011324	ddx39b	100	91.304	ENSFDAG00000011074	DDX39B	100	90.618	Fukomys_damarensis
ENSPKIG00000011324	ddx39b	72	95.570	ENSGAGG00000001300	-	80	95.570	Gopherus_agassizii
ENSPKIG00000011324	ddx39b	100	91.304	ENSGGOG00000005989	DDX39B	100	90.847	Gorilla_gorilla
ENSPKIG00000011324	ddx39b	100	90.389	ENSHGLG00000019248	DDX39B	100	90.618	Heterocephalus_glaber_female
ENSPKIG00000011324	ddx39b	100	90.389	ENSHGLG00100011850	DDX39B	100	90.618	Heterocephalus_glaber_male
ENSPKIG00000011324	ddx39b	100	95.423	ENSIPUG00000015733	DDX39B	94	95.423	Ictalurus_punctatus
ENSPKIG00000011324	ddx39b	100	91.076	ENSSTOG00000012838	DDX39B	100	90.389	Ictidomys_tridecemlineatus
ENSPKIG00000011324	ddx39b	100	90.847	ENSJJAG00000005660	-	100	90.160	Jaculus_jaculus
ENSPKIG00000011324	ddx39b	64	80.427	ENSLBEG00000017177	-	81	80.427	Labrus_bergylta
ENSPKIG00000011324	ddx39b	99	77.315	ENSLBEG00000012254	ddx39b	99	77.083	Labrus_bergylta
ENSPKIG00000011324	ddx39b	100	82.844	ENSLACG00000002110	DDX39B	100	82.167	Latimeria_chalumnae
ENSPKIG00000011324	ddx39b	100	91.076	ENSLAFG00000014202	DDX39B	100	90.618	Loxodonta_africana
ENSPKIG00000011324	ddx39b	100	91.304	ENSMFAG00000034233	DDX39B	100	90.847	Macaca_fascicularis
ENSPKIG00000011324	ddx39b	100	91.304	ENSMMUG00000008839	DDX39B	100	90.847	Macaca_mulatta
ENSPKIG00000011324	ddx39b	100	91.304	ENSMNEG00000041059	DDX39B	100	90.847	Macaca_nemestrina
ENSPKIG00000011324	ddx39b	100	91.304	ENSMLEG00000043791	DDX39B	100	90.847	Mandrillus_leucophaeus
ENSPKIG00000011324	ddx39b	99	91.284	ENSMZEG00005017654	ddx39b	99	91.284	Maylandia_zebra
ENSPKIG00000011324	ddx39b	100	90.847	ENSMAUG00000008059	Ddx39b	100	90.160	Mesocricetus_auratus
ENSPKIG00000011324	ddx39b	100	91.304	ENSMICG00000017349	DDX39B	100	90.847	Microcebus_murinus
ENSPKIG00000011324	ddx39b	100	91.076	ENSMOCG00000011169	Ddx39b	100	90.389	Microtus_ochrogaster
ENSPKIG00000011324	ddx39b	88	90.649	ENSMODG00000015791	DDX39B	88	90.130	Monodelphis_domestica
ENSPKIG00000011324	ddx39b	100	91.304	ENSMUSG00000019432	Ddx39b	100	94.595	Mus_musculus
ENSPKIG00000011324	ddx39b	100	91.304	MGP_PahariEiJ_G0020513	Ddx39b	100	94.595	Mus_pahari
ENSPKIG00000011324	ddx39b	100	91.304	MGP_SPRETEiJ_G0022424	Ddx39b	100	90.618	Mus_spretus
ENSPKIG00000011324	ddx39b	100	91.533	ENSMPUG00000011407	DDX39B	100	91.076	Mustela_putorius_furo
ENSPKIG00000011324	ddx39b	71	95.498	ENSMLUG00000001681	DDX39B	100	95.498	Myotis_lucifugus
ENSPKIG00000011324	ddx39b	100	91.304	ENSNGAG00000022948	Ddx39b	100	90.847	Nannospalax_galili
ENSPKIG00000011324	ddx39b	65	95.088	ENSNLEG00000006094	DDX39B	100	71.854	Nomascus_leucogenys
ENSPKIG00000011324	ddx39b	86	97.297	ENSMEUG00000008264	DDX39B	86	97.297	Notamacropus_eugenii
ENSPKIG00000011324	ddx39b	100	91.533	ENSOPRG00000011923	DDX39B	100	91.076	Ochotona_princeps
ENSPKIG00000011324	ddx39b	100	90.847	ENSODEG00000018083	DDX39B	100	90.389	Octodon_degus
ENSPKIG00000011324	ddx39b	100	91.533	ENSONIG00000004740	ddx39b	100	91.533	Oreochromis_niloticus
ENSPKIG00000011324	ddx39b	56	86.585	ENSOANG00000008361	DDX39B	95	85.366	Ornithorhynchus_anatinus
ENSPKIG00000011324	ddx39b	100	88.496	ENSOCUG00000024126	DDX39B	100	87.832	Oryctolagus_cuniculus
ENSPKIG00000011324	ddx39b	82	87.968	ENSOGAG00000009067	-	100	94.136	Otolemur_garnettii
ENSPKIG00000011324	ddx39b	100	90.639	ENSOGAG00000028850	-	100	89.954	Otolemur_garnettii
ENSPKIG00000011324	ddx39b	100	91.533	ENSOARG00000008787	DDX39B	98	90.847	Ovis_aries
ENSPKIG00000011324	ddx39b	100	91.304	ENSPPAG00000043072	DDX39B	100	90.847	Pan_paniscus
ENSPKIG00000011324	ddx39b	100	91.533	ENSPPRG00000001913	DDX39B	100	91.076	Panthera_pardus
ENSPKIG00000011324	ddx39b	100	91.304	ENSPTIG00000017669	DDX39B	100	90.847	Panthera_tigris_altaica
ENSPKIG00000011324	ddx39b	100	91.304	ENSPTRG00000032509	DDX39B	100	90.847	Pan_troglodytes
ENSPKIG00000011324	ddx39b	100	91.304	ENSPANG00000018609	DDX39B	100	90.847	Papio_anubis
ENSPKIG00000011324	ddx39b	100	91.076	ENSPEMG00000016905	Ddx39b	100	90.389	Peromyscus_maniculatus_bairdii
ENSPKIG00000011324	ddx39b	100	91.304	ENSPCIG00000017572	DDX39B	100	90.847	Phascolarctos_cinereus
ENSPKIG00000011324	ddx39b	100	91.304	ENSPPYG00000016433	DDX39B	100	90.847	Pongo_abelii
ENSPKIG00000011324	ddx39b	65	95.070	ENSPCAG00000003484	DDX39B	100	95.070	Procavia_capensis
ENSPKIG00000011324	ddx39b	100	91.304	ENSPCOG00000018656	DDX39B	100	90.847	Propithecus_coquereli
ENSPKIG00000011324	ddx39b	100	91.304	ENSPVAG00000004653	DDX39B	100	90.618	Pteropus_vampyrus
ENSPKIG00000011324	ddx39b	98	82.051	ENSPNYG00000010382	ddx39b	98	82.407	Pundamilia_nyererei
ENSPKIG00000011324	ddx39b	100	96.110	ENSPNAG00000026926	ddx39b	100	96.110	Pygocentrus_nattereri
ENSPKIG00000011324	ddx39b	100	91.304	ENSRNOG00000000841	Ddx39b	100	90.618	Rattus_norvegicus
ENSPKIG00000011324	ddx39b	100	81.465	ENSRBIG00000031309	DDX39B	100	80.778	Rhinopithecus_bieti
ENSPKIG00000011324	ddx39b	100	91.304	ENSRROG00000039517	DDX39B	100	90.847	Rhinopithecus_roxellana
ENSPKIG00000011324	ddx39b	100	81.465	ENSSBOG00000035513	-	100	80.778	Saimiri_boliviensis_boliviensis
ENSPKIG00000011324	ddx39b	100	91.304	ENSSHAG00000003209	DDX39B	100	90.847	Sarcophilus_harrisii
ENSPKIG00000011324	ddx39b	100	97.941	ENSSFOG00015016107	ddx39b	100	97.941	Scleropages_formosus
ENSPKIG00000011324	ddx39b	100	92.220	ENSSDUG00000011557	ddx39b	100	92.449	Seriola_dumerili
ENSPKIG00000011324	ddx39b	100	92.449	ENSSLDG00000015763	ddx39b	100	92.677	Seriola_lalandi_dorsalis
ENSPKIG00000011324	ddx39b	88	79.634	ENSSARG00000005245	DDX39B	100	78.851	Sorex_araneus
ENSPKIG00000011324	ddx39b	100	91.076	ENSSPUG00000012805	DDX39B	100	90.160	Sphenodon_punctatus
ENSPKIG00000011324	ddx39b	100	91.533	ENSSSCG00000001400	DDX39B	100	95.954	Sus_scrofa
ENSPKIG00000011324	ddx39b	100	69.108	ENSTBEG00000003721	DDX39B	100	68.421	Tupaia_belangeri
ENSPKIG00000011324	ddx39b	100	83.937	ENSTTRG00000014074	DDX39B	100	83.937	Tursiops_truncatus
ENSPKIG00000011324	ddx39b	100	79.271	ENSUAMG00000027335	DDX39B	100	78.815	Ursus_americanus
ENSPKIG00000011324	ddx39b	100	83.066	ENSUMAG00000015124	DDX39B	100	82.380	Ursus_maritimus
ENSPKIG00000011324	ddx39b	62	81.148	ENSVPAG00000009167	-	74	78.689	Vicugna_pacos
ENSPKIG00000011324	ddx39b	100	91.533	ENSVVUG00000019518	DDX39B	99	90.847	Vulpes_vulpes
ENSPKIG00000011324	ddx39b	100	80.638	ENSXETG00000002498	ddx39b	99	80.410	Xenopus_tropicalis