EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000011733 (Gene tree)
Gene ID
111853336
Gene Symbol
CNOT3
Alias
-
Full Name
CCR4-NOT transcription complex subunit 3
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Plus strand
Length
7773 bases
Position
chrPGUA01000253.1:512476-520248
Accession
111853336
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000031176Not3PF04065.153e-9511
ENSPKIP00000031134Not3PF04065.153.3e-9511
ENSPKIP00000031176NOT2_3_5PF04153.182.8e-3811
ENSPKIP00000031134NOT2_3_5PF04153.183e-3811
ENSPKIP00000031182NOT2_3_5PF04153.183.1e-3211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000012017CNOT3-2022583-ENSPKIP00000031176860 (aa)--
ENSPKIT00000012023CNOT3-2031989-ENSPKIP00000031182662 (aa)--
ENSPKIT00000011975CNOT3-2013637-ENSPKIP00000031134921 (aa)XP_023685872UPI000CD6675C
Gene Model
Click here to download ENSPKIG00000011733's gene model file
Pathways
Pathway IDPathway NameSource
pki03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000011733's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000011733CNOT37197.863ENSPKIG00000015967-10093.227
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000011733CNOT37383.090ENSG00000088038CNOT310095.361Homo_sapiens
ENSPKIG00000011733CNOT36083.630ENSAPOG00000015499CNOT38883.630Acanthochromis_polyacanthus
ENSPKIG00000011733CNOT35786.364ENSAPOG00000015002cnot3b7591.697Acanthochromis_polyacanthus
ENSPKIG00000011733CNOT37383.626ENSAMEG00000004528CNOT39091.803Ailuropoda_melanoleuca
ENSPKIG00000011733CNOT37092.857ENSACIG00000003652cnot3b9992.857Amphilophus_citrinellus
ENSPKIG00000011733CNOT37995.299ENSACIG00000006635cnot3a9995.299Amphilophus_citrinellus
ENSPKIG00000011733CNOT36977.570ENSAOCG00000018385-9878.947Amphiprion_ocellaris
ENSPKIG00000011733CNOT36961.822ENSAOCG00000023769cnot3a9965.843Amphiprion_ocellaris
ENSPKIG00000011733CNOT37161.996ENSAPEG00000006624cnot3a10068.517Amphiprion_percula
ENSPKIG00000011733CNOT37983.333ENSAPEG00000002640cnot3b9993.981Amphiprion_percula
ENSPKIG00000011733CNOT310064.238ENSATEG00000022737cnot3a10066.737Anabas_testudineus
ENSPKIG00000011733CNOT310067.418ENSATEG00000015777cnot3b10065.914Anabas_testudineus
ENSPKIG00000011733CNOT37890.323ENSACAG00000016085CNOT39691.447Anolis_carolinensis
ENSPKIG00000011733CNOT37190.323ENSANAG00000025756CNOT38991.475Aotus_nancymaae
ENSPKIG00000011733CNOT310066.667ENSACLG00000016702cnot3b10067.570Astatotilapia_calliptera
ENSPKIG00000011733CNOT37855.939ENSACLG00000021136cnot3a10066.842Astatotilapia_calliptera
ENSPKIG00000011733CNOT310066.667ENSAMXG00000009447cnot3b9691.892Astyanax_mexicanus
ENSPKIG00000011733CNOT310065.364ENSAMXG00000012359cnot3a10067.053Astyanax_mexicanus
ENSPKIG00000011733CNOT37190.323ENSBTAG00000014900CNOT39091.475Bos_taurus
ENSPKIG00000011733CNOT35354.696WBGene00003826ntl-38158.750Caenorhabditis_elegans
ENSPKIG00000011733CNOT37190.323ENSCJAG00000001094CNOT38991.475Callithrix_jacchus
ENSPKIG00000011733CNOT37579.292ENSCAFG00000002699CNOT39091.475Canis_familiaris
ENSPKIG00000011733CNOT37579.292ENSCAFG00020018359CNOT39091.475Canis_lupus_dingo
ENSPKIG00000011733CNOT36688.350ENSCHIG00000015302CNOT39789.474Capra_hircus
ENSPKIG00000011733CNOT37190.323ENSTSYG00000008058CNOT38991.475Carlito_syrichta
ENSPKIG00000011733CNOT37579.564ENSCAPG00000009533CNOT38891.475Cavia_aperea
ENSPKIG00000011733CNOT37579.564ENSCPOG00000020741CNOT38991.475Cavia_porcellus
ENSPKIG00000011733CNOT37190.323ENSCCAG00000036290CNOT38991.475Cebus_capucinus
ENSPKIG00000011733CNOT37383.090ENSCATG00000030324CNOT39191.475Cercocebus_atys
ENSPKIG00000011733CNOT38373.415ENSCLAG00000003302CNOT310086.585Chinchilla_lanigera
ENSPKIG00000011733CNOT37383.090ENSCSAG00000001900CNOT39191.475Chlorocebus_sabaeus
ENSPKIG00000011733CNOT37290.323ENSCPBG00000011655CNOT39691.475Chrysemys_picta_bellii
ENSPKIG00000011733CNOT37380.488ENSCING00000000293-5980.488Ciona_intestinalis
ENSPKIG00000011733CNOT37190.323ENSCANG00000013408CNOT39191.475Colobus_angolensis_palliatus
ENSPKIG00000011733CNOT37580.109ENSCGRG00001000855Cnot38991.803Cricetulus_griseus_chok1gshd
ENSPKIG00000011733CNOT37989.655ENSCSEG00000016892cnot3b9490.419Cynoglossus_semilaevis
ENSPKIG00000011733CNOT310064.803ENSCSEG00000003574cnot3a10066.285Cynoglossus_semilaevis
ENSPKIG00000011733CNOT37358.111ENSCVAG00000008168cnot3a10065.579Cyprinodon_variegatus
ENSPKIG00000011733CNOT37554.971ENSCVAG00000022122cnot3b10064.084Cyprinodon_variegatus
ENSPKIG00000011733CNOT310064.873ENSDARG00000007135cnot3a10065.820Danio_rerio
ENSPKIG00000011733CNOT37190.000ENSDNOG00000045972CNOT38991.148Dasypus_novemcinctus
ENSPKIG00000011733CNOT37579.837ENSDORG00000008021Cnot39791.475Dipodomys_ordii
ENSPKIG00000011733CNOT355100.000ENSETEG00000006305CNOT358100.000Echinops_telfairi
ENSPKIG00000011733CNOT37070.261ENSEBUG00000010437cnot3a8267.532Eptatretus_burgeri
ENSPKIG00000011733CNOT37190.323ENSEASG00005021591CNOT39091.475Equus_asinus_asinus
ENSPKIG00000011733CNOT37190.323ENSECAG00000023181CNOT39091.475Equus_caballus
ENSPKIG00000011733CNOT310058.246ENSELUG00000000953cnot3b10064.470Esox_lucius
ENSPKIG00000011733CNOT310067.526ENSELUG00000014743cnot3a10067.220Esox_lucius
ENSPKIG00000011733CNOT37579.019ENSFCAG00000014042CNOT39091.475Felis_catus
ENSPKIG00000011733CNOT310063.458ENSFHEG00000001696cnot3b10063.120Fundulus_heteroclitus
ENSPKIG00000011733CNOT37386.296ENSFHEG00000023166cnot3a10086.296Fundulus_heteroclitus
ENSPKIG00000011733CNOT39462.752ENSGMOG00000005365cnot3a9861.964Gadus_morhua
ENSPKIG00000011733CNOT310062.721ENSGAFG00000003459cnot3b9182.308Gambusia_affinis
ENSPKIG00000011733CNOT37857.115ENSGAFG00000013094cnot3a10065.401Gambusia_affinis
ENSPKIG00000011733CNOT36557.666ENSGACG00000011489cnot3a9861.538Gasterosteus_aculeatus
ENSPKIG00000011733CNOT36582.707ENSGACG00000009395cnot3b7290.265Gasterosteus_aculeatus
ENSPKIG00000011733CNOT36591.373ENSGAGG00000012677CNOT39590.367Gopherus_agassizii
ENSPKIG00000011733CNOT37383.090ENSGGOG00000012996CNOT38991.475Gorilla_gorilla
ENSPKIG00000011733CNOT37855.939ENSHBUG00000005275cnot3a10066.842Haplochromis_burtoni
ENSPKIG00000011733CNOT37190.323ENSHGLG00000008821CNOT310081.609Heterocephalus_glaber_female
ENSPKIG00000011733CNOT35785.385ENSHGLG00100006181CNOT310081.609Heterocephalus_glaber_male
ENSPKIG00000011733CNOT310065.823ENSHCOG00000020968cnot3a10066.667Hippocampus_comes
ENSPKIG00000011733CNOT38580.734ENSIPUG00000000167cnot310060.786Ictalurus_punctatus
ENSPKIG00000011733CNOT310066.704ENSIPUG00000009046cnot3b9786.387Ictalurus_punctatus
ENSPKIG00000011733CNOT37190.323ENSSTOG00000028248CNOT38991.475Ictidomys_tridecemlineatus
ENSPKIG00000011733CNOT37092.105ENSJJAG00000014594Cnot310081.609Jaculus_jaculus
ENSPKIG00000011733CNOT310065.622ENSKMAG00000018723cnot3b10065.825Kryptolebias_marmoratus
ENSPKIG00000011733CNOT37682.741ENSKMAG00000004863cnot3a9992.216Kryptolebias_marmoratus
ENSPKIG00000011733CNOT38089.418ENSLBEG00000017296cnot3a8589.418Labrus_bergylta
ENSPKIG00000011733CNOT39766.416ENSLBEG00000018278cnot3b7391.830Labrus_bergylta
ENSPKIG00000011733CNOT37189.677ENSLACG00000009742CNOT39390.820Latimeria_chalumnae
ENSPKIG00000011733CNOT35396.407ENSLOCG00000000005cnot3b7796.407Lepisosteus_oculatus
ENSPKIG00000011733CNOT37189.389ENSLAFG00000022133CNOT38990.523Loxodonta_africana
ENSPKIG00000011733CNOT37482.609ENSMFAG00000040073CNOT39191.475Macaca_fascicularis
ENSPKIG00000011733CNOT36393.277ENSMMUG00000009698CNOT310098.039Macaca_mulatta
ENSPKIG00000011733CNOT37383.090ENSMNEG00000036750CNOT39191.475Macaca_nemestrina
ENSPKIG00000011733CNOT37383.090ENSMLEG00000036579CNOT39191.475Mandrillus_leucophaeus
ENSPKIG00000011733CNOT37760.116ENSMAMG00000019397cnot3a10067.613Mastacembelus_armatus
ENSPKIG00000011733CNOT36958.921ENSMAMG00000019357cnot3b10066.701Mastacembelus_armatus
ENSPKIG00000011733CNOT37855.939ENSMZEG00005016304cnot3a10066.842Maylandia_zebra
ENSPKIG00000011733CNOT310066.875ENSMZEG00005002466cnot3b10068.096Maylandia_zebra
ENSPKIG00000011733CNOT37580.109ENSMAUG00000014996Cnot38991.803Mesocricetus_auratus
ENSPKIG00000011733CNOT37189.241ENSMICG00000002370CNOT38991.475Microcebus_murinus
ENSPKIG00000011733CNOT37091.632ENSMMOG00000013086cnot3b8791.250Mola_mola
ENSPKIG00000011733CNOT37990.171ENSMMOG00000016446cnot3a10065.714Mola_mola
ENSPKIG00000011733CNOT35793.307ENSMODG00000004066CNOT37191.475Monodelphis_domestica
ENSPKIG00000011733CNOT310065.781ENSMALG00000009204cnot3a10066.348Monopterus_albus
ENSPKIG00000011733CNOT38387.374ENSMALG00000004936cnot3b9688.889Monopterus_albus
ENSPKIG00000011733CNOT37579.837MGP_CAROLIEiJ_G0029095Cnot310096.000Mus_caroli
ENSPKIG00000011733CNOT37579.837ENSMUSG00000035632Cnot310096.000Mus_musculus
ENSPKIG00000011733CNOT37579.837MGP_PahariEiJ_G0020964Cnot310096.000Mus_pahari
ENSPKIG00000011733CNOT37579.837MGP_SPRETEiJ_G0030148Cnot310096.000Mus_spretus
ENSPKIG00000011733CNOT37383.626ENSMPUG00000010352CNOT39091.475Mustela_putorius_furo
ENSPKIG00000011733CNOT37190.323ENSNGAG00000013266Cnot38991.475Nannospalax_galili
ENSPKIG00000011733CNOT38089.431ENSNBRG00000003336cnot3b9790.265Neolamprologus_brichardi
ENSPKIG00000011733CNOT37856.130ENSNBRG00000002401cnot3a10065.367Neolamprologus_brichardi
ENSPKIG00000011733CNOT37383.090ENSNLEG00000006272CNOT36791.566Nomascus_leucogenys
ENSPKIG00000011733CNOT352100.000ENSOPRG00000001605-57100.000Ochotona_princeps
ENSPKIG00000011733CNOT38075.186ENSODEG00000000705CNOT310089.873Octodon_degus
ENSPKIG00000011733CNOT310066.378ENSONIG00000006568cnot3a10067.098Oreochromis_niloticus
ENSPKIG00000011733CNOT310066.839ENSONIG00000007047cnot3b10068.372Oreochromis_niloticus
ENSPKIG00000011733CNOT38790.323ENSOCUG00000007691CNOT38991.475Oryctolagus_cuniculus
ENSPKIG00000011733CNOT36961.017ENSORLG00000005982cnot3b10066.737Oryzias_latipes
ENSPKIG00000011733CNOT37158.562ENSORLG00000011174cnot3a10065.499Oryzias_latipes
ENSPKIG00000011733CNOT36961.620ENSORLG00020005779cnot3b10067.857Oryzias_latipes_hni
ENSPKIG00000011733CNOT37158.351ENSORLG00020008009cnot3a10065.503Oryzias_latipes_hni
ENSPKIG00000011733CNOT37158.351ENSORLG00015013729cnot3a10065.037Oryzias_latipes_hsok
ENSPKIG00000011733CNOT36961.359ENSORLG00015019021cnot3b10066.736Oryzias_latipes_hsok
ENSPKIG00000011733CNOT310067.125ENSOMEG00000015557cnot3b10066.526Oryzias_melastigma
ENSPKIG00000011733CNOT38791.373ENSOMEG00000010309cnot3a10065.364Oryzias_melastigma
ENSPKIG00000011733CNOT37384.795ENSOGAG00000006945CNOT38991.475Otolemur_garnettii
ENSPKIG00000011733CNOT35292.513ENSOARG00000002981CNOT36392.513Ovis_aries
ENSPKIG00000011733CNOT37383.090ENSPPAG00000002748CNOT38991.475Pan_paniscus
ENSPKIG00000011733CNOT37579.019ENSPPRG00000011705CNOT39091.475Panthera_pardus
ENSPKIG00000011733CNOT36591.946ENSPTIG00000008781CNOT38991.946Panthera_tigris_altaica
ENSPKIG00000011733CNOT37383.090ENSPTRG00000011444CNOT38991.475Pan_troglodytes
ENSPKIG00000011733CNOT37383.090ENSPTRG00000046717-8991.475Pan_troglodytes
ENSPKIG00000011733CNOT37383.090ENSPANG00000009375CNOT39191.475Papio_anubis
ENSPKIG00000011733CNOT39861.416ENSPMGG00000022539cnot3b9961.250Periophthalmus_magnuspinnatus
ENSPKIG00000011733CNOT37579.837ENSPEMG00000024185Cnot38891.803Peromyscus_maniculatus_bairdii
ENSPKIG00000011733CNOT37091.447ENSPCIG00000023018CNOT39791.148Phascolarctos_cinereus
ENSPKIG00000011733CNOT37790.066ENSPFOG00000008693cnot3a9488.141Poecilia_formosa
ENSPKIG00000011733CNOT310063.180ENSPFOG00000007168cnot3b10063.816Poecilia_formosa
ENSPKIG00000011733CNOT37857.308ENSPLAG00000013324cnot3a10065.717Poecilia_latipinna
ENSPKIG00000011733CNOT310063.180ENSPLAG00000013457cnot3b10063.816Poecilia_latipinna
ENSPKIG00000011733CNOT37857.500ENSPMEG00000017718cnot3a10065.753Poecilia_mexicana
ENSPKIG00000011733CNOT310063.808ENSPMEG00000010184cnot3b10064.458Poecilia_mexicana
ENSPKIG00000011733CNOT39184.918ENSPREG00000007592cnot3a9890.811Poecilia_reticulata
ENSPKIG00000011733CNOT39959.263ENSPREG00000000662cnot3b9759.302Poecilia_reticulata
ENSPKIG00000011733CNOT37382.799ENSPPYG00000010372CNOT38891.148Pongo_abelii
ENSPKIG00000011733CNOT37189.241ENSPCOG00000017673CNOT39791.475Propithecus_coquereli
ENSPKIG00000011733CNOT37382.749ENSPVAG00000015564CNOT38990.492Pteropus_vampyrus
ENSPKIG00000011733CNOT37855.747ENSPNYG00000002282cnot3a10066.737Pundamilia_nyererei
ENSPKIG00000011733CNOT310070.539ENSPNAG00000027459cnot3b10069.905Pygocentrus_nattereri
ENSPKIG00000011733CNOT38384.892ENSPNAG00000017679cnot3a9593.750Pygocentrus_nattereri
ENSPKIG00000011733CNOT37579.837ENSRNOG00000053234Cnot38891.803Rattus_norvegicus
ENSPKIG00000011733CNOT37482.609ENSRBIG00000031025CNOT39191.475Rhinopithecus_bieti
ENSPKIG00000011733CNOT37482.899ENSRROG00000003872CNOT39191.475Rhinopithecus_roxellana
ENSPKIG00000011733CNOT37190.323ENSSBOG00000030268CNOT38991.475Saimiri_boliviensis_boliviensis
ENSPKIG00000011733CNOT310069.588ENSSFOG00015019203-10070.644Scleropages_formosus
ENSPKIG00000011733CNOT310077.354ENSSFOG00015000248cnot310077.143Scleropages_formosus
ENSPKIG00000011733CNOT310065.749ENSSMAG00000016031cnot3b10065.916Scophthalmus_maximus
ENSPKIG00000011733CNOT37558.614ENSSMAG00000013235cnot3a10065.933Scophthalmus_maximus
ENSPKIG00000011733CNOT38595.726ENSSDUG00000008181cnot3a10088.123Seriola_dumerili
ENSPKIG00000011733CNOT310067.316ENSSDUG00000003428cnot3b10067.762Seriola_dumerili
ENSPKIG00000011733CNOT37557.853ENSSLDG00000014733cnot3a9966.703Seriola_lalandi_dorsalis
ENSPKIG00000011733CNOT310067.385ENSSLDG00000014376cnot3b10067.864Seriola_lalandi_dorsalis
ENSPKIG00000011733CNOT38284.348ENSSPUG00000008510CNOT39691.475Sphenodon_punctatus
ENSPKIG00000011733CNOT38691.797ENSSPAG00000003858cnot3a9190.780Stegastes_partitus
ENSPKIG00000011733CNOT310068.313ENSSPAG00000001429cnot3b10068.421Stegastes_partitus
ENSPKIG00000011733CNOT37190.323ENSSSCG00000003264CNOT38991.475Sus_scrofa
ENSPKIG00000011733CNOT38057.062ENSTRUG00000015732cnot3a10067.447Takifugu_rubripes
ENSPKIG00000011733CNOT37585.976ENSTRUG00000007248cnot3b8994.578Takifugu_rubripes
ENSPKIG00000011733CNOT39463.462ENSTNIG00000008082cnot3a10064.407Tetraodon_nigroviridis
ENSPKIG00000011733CNOT39463.487ENSTNIG00000005663cnot3b10064.286Tetraodon_nigroviridis
ENSPKIG00000011733CNOT37383.626ENSUAMG00000005234CNOT39091.803Ursus_americanus
ENSPKIG00000011733CNOT36092.126ENSUMAG00000010934CNOT38693.697Ursus_maritimus
ENSPKIG00000011733CNOT37579.292ENSVVUG00000008239CNOT39091.475Vulpes_vulpes
ENSPKIG00000011733CNOT37391.373ENSXETG00000003166cnot38990.291Xenopus_tropicalis
ENSPKIG00000011733CNOT37682.069ENSXCOG00000019460cnot3a9895.299Xiphophorus_couchianus
ENSPKIG00000011733CNOT39761.153ENSXCOG00000018976cnot3b9961.147Xiphophorus_couchianus
ENSPKIG00000011733CNOT37856.538ENSXMAG00000012273cnot3a10065.539Xiphophorus_maculatus
ENSPKIG00000011733CNOT310062.978ENSXMAG00000014176cnot3b10063.854Xiphophorus_maculatus

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