EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000012116 (Gene tree)
Gene ID: -
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 2472 bases
Position: chrPGUA01001979.1:38-2509
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000031762	KH_1	PF00013.29	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000012616	-	1176	-	ENSPKIP00000031762	391 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000012116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012116's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000012116	sf1	88	74.499	ENSAMEG00000017828	SF1	52	78.235	Ailuropoda_melanoleuca
ENSPKIG00000012116	sf1	78	82.566	ENSACIG00000016514	sf1	51	80.896	Amphilophus_citrinellus
ENSPKIG00000012116	sf1	92	70.959	ENSANAG00000022607	-	78	74.684	Aotus_nancymaae
ENSPKIG00000012116	sf1	89	75.287	ENSANAG00000026664	-	77	79.580	Aotus_nancymaae
ENSPKIG00000012116	sf1	79	81.672	ENSACLG00000007633	sf1	50	80.838	Astatotilapia_calliptera
ENSPKIG00000012116	sf1	88	74.499	ENSBTAG00000001035	SF1	54	79.580	Bos_taurus
ENSPKIG00000012116	sf1	88	74.499	ENSCJAG00000002780	SF1	51	79.880	Callithrix_jacchus
ENSPKIG00000012116	sf1	88	74.499	ENSCAFG00000014239	SF1	51	79.580	Canis_familiaris
ENSPKIG00000012116	sf1	88	74.499	ENSCAFG00020014381	SF1	51	79.880	Canis_lupus_dingo
ENSPKIG00000012116	sf1	88	74.499	ENSCHIG00000025867	SF1	60	79.580	Capra_hircus
ENSPKIG00000012116	sf1	56	89.908	ENSTSYG00000033618	SF1	71	92.857	Carlito_syrichta
ENSPKIG00000012116	sf1	88	74.499	ENSCAPG00000010762	SF1	60	78.363	Cavia_aperea
ENSPKIG00000012116	sf1	88	74.499	ENSCPOG00000012290	SF1	61	79.580	Cavia_porcellus
ENSPKIG00000012116	sf1	89	73.775	ENSCCAG00000037881	SF1	77	79.580	Cebus_capucinus
ENSPKIG00000012116	sf1	86	68.328	ENSCCAG00000023781	-	71	67.372	Cebus_capucinus
ENSPKIG00000012116	sf1	89	73.775	ENSCATG00000011564	SF1	76	78.834	Cercocebus_atys
ENSPKIG00000012116	sf1	88	74.499	ENSCSAG00000007258	SF1	60	79.580	Chlorocebus_sabaeus
ENSPKIG00000012116	sf1	86	75.953	ENSCHOG00000006008	SF1	62	79.580	Choloepus_hoffmanni
ENSPKIG00000012116	sf1	65	65.370	ENSCING00000005564	-	64	59.202	Ciona_intestinalis
ENSPKIG00000012116	sf1	95	56.021	ENSCSAVG00000009055	-	86	55.956	Ciona_savignyi
ENSPKIG00000012116	sf1	88	74.499	ENSCANG00000042201	SF1	74	80.831	Colobus_angolensis_palliatus
ENSPKIG00000012116	sf1	88	74.499	ENSCGRG00001003677	Sf1	58	78.529	Cricetulus_griseus_chok1gshd
ENSPKIG00000012116	sf1	88	74.499	ENSCGRG00000001708	Sf1	60	79.279	Cricetulus_griseus_crigri
ENSPKIG00000012116	sf1	79	80.707	ENSCVAG00000001670	sf1	51	80.967	Cyprinodon_variegatus
ENSPKIG00000012116	sf1	83	81.818	ENSDARG00000008188	sf1	57	84.431	Danio_rerio
ENSPKIG00000012116	sf1	86	75.964	ENSDNOG00000001282	SF1	60	80.180	Dasypus_novemcinctus
ENSPKIG00000012116	sf1	88	74.499	ENSDORG00000016334	Sf1	51	79.880	Dipodomys_ordii
ENSPKIG00000012116	sf1	88	74.212	ENSEASG00005018272	SF1	60	79.279	Equus_asinus_asinus
ENSPKIG00000012116	sf1	88	74.212	ENSECAG00000024544	SF1	60	79.279	Equus_caballus
ENSPKIG00000012116	sf1	86	77.811	ENSEEUG00000001058	SF1	85	79.412	Erinaceus_europaeus
ENSPKIG00000012116	sf1	88	74.499	ENSFCAG00000012231	SF1	51	79.580	Felis_catus
ENSPKIG00000012116	sf1	88	74.499	ENSFDAG00000009833	SF1	60	78.824	Fukomys_damarensis
ENSPKIG00000012116	sf1	90	72.626	ENSGMOG00000007469	sf1	57	75.740	Gadus_morhua
ENSPKIG00000012116	sf1	84	79.580	ENSGAFG00000019284	sf1	63	81.381	Gambusia_affinis
ENSPKIG00000012116	sf1	81	80.556	ENSGACG00000000826	sf1	59	78.797	Gasterosteus_aculeatus
ENSPKIG00000012116	sf1	88	74.499	ENSHGLG00000009541	SF1	58	78.824	Heterocephalus_glaber_female
ENSPKIG00000012116	sf1	92	68.241	ENSHGLG00100008255	-	72	70.950	Heterocephalus_glaber_male
ENSPKIG00000012116	sf1	68	81.439	ENSHGLG00100008076	-	66	70.760	Heterocephalus_glaber_male
ENSPKIG00000012116	sf1	88	74.499	ENSHGLG00100013879	-	61	79.580	Heterocephalus_glaber_male
ENSPKIG00000012116	sf1	88	74.499	ENSSTOG00000009790	-	52	79.880	Ictidomys_tridecemlineatus
ENSPKIG00000012116	sf1	76	79.125	ENSSTOG00000024353	-	65	76.347	Ictidomys_tridecemlineatus
ENSPKIG00000012116	sf1	88	74.212	ENSJJAG00000011788	Sf1	51	79.580	Jaculus_jaculus
ENSPKIG00000012116	sf1	83	78.979	ENSKMAG00000005854	sf1	50	80.415	Kryptolebias_marmoratus
ENSPKIG00000012116	sf1	80	81.250	ENSLBEG00000019836	sf1	52	81.306	Labrus_bergylta
ENSPKIG00000012116	sf1	88	76.966	ENSLACG00000018493	SF1	61	78.841	Latimeria_chalumnae
ENSPKIG00000012116	sf1	80	83.596	ENSLOCG00000002130	sf1	51	83.976	Lepisosteus_oculatus
ENSPKIG00000012116	sf1	88	74.499	ENSLAFG00000007201	SF1	57	75.714	Loxodonta_africana
ENSPKIG00000012116	sf1	89	73.775	ENSMFAG00000033122	SF1	76	78.834	Macaca_fascicularis
ENSPKIG00000012116	sf1	88	74.499	ENSMMUG00000022606	SF1	81	78.824	Macaca_mulatta
ENSPKIG00000012116	sf1	89	73.775	ENSMNEG00000037901	SF1	76	78.834	Macaca_nemestrina
ENSPKIG00000012116	sf1	89	73.775	ENSMLEG00000040706	SF1	76	78.834	Mandrillus_leucophaeus
ENSPKIG00000012116	sf1	88	74.499	ENSMAUG00000014064	Sf1	58	78.529	Mesocricetus_auratus
ENSPKIG00000012116	sf1	89	73.563	ENSMICG00000001202	SF1	77	79.341	Microcebus_murinus
ENSPKIG00000012116	sf1	88	74.499	ENSMOCG00000022038	Sf1	58	78.529	Microtus_ochrogaster
ENSPKIG00000012116	sf1	88	74.286	ENSMODG00000029407	SF1	73	78.824	Monodelphis_domestica
ENSPKIG00000012116	sf1	78	81.908	ENSMALG00000020521	sf1	55	81.325	Monopterus_albus
ENSPKIG00000012116	sf1	88	74.499	MGP_CAROLIEiJ_G0022607	Sf1	80	92.958	Mus_caroli
ENSPKIG00000012116	sf1	88	74.499	ENSMUSG00000024949	Sf1	80	92.958	Mus_musculus
ENSPKIG00000012116	sf1	88	74.499	MGP_PahariEiJ_G0014101	Sf1	80	92.958	Mus_pahari
ENSPKIG00000012116	sf1	88	74.499	MGP_SPRETEiJ_G0023518	Sf1	80	92.958	Mus_spretus
ENSPKIG00000012116	sf1	86	75.964	ENSMPUG00000012684	SF1	51	80.180	Mustela_putorius_furo
ENSPKIG00000012116	sf1	97	69.948	ENSMLUG00000029800	-	57	74.706	Myotis_lucifugus
ENSPKIG00000012116	sf1	86	75.668	ENSMLUG00000015217	-	51	80.180	Myotis_lucifugus
ENSPKIG00000012116	sf1	88	74.212	ENSNGAG00000005550	Sf1	58	78.529	Nannospalax_galili
ENSPKIG00000012116	sf1	88	74.499	ENSNLEG00000005236	-	74	80.831	Nomascus_leucogenys
ENSPKIG00000012116	sf1	88	74.499	ENSMEUG00000013424	SF1	62	79.580	Notamacropus_eugenii
ENSPKIG00000012116	sf1	88	74.785	ENSOPRG00000005008	SF1	66	80.180	Ochotona_princeps
ENSPKIG00000012116	sf1	86	72.107	ENSODEG00000006102	-	52	75.976	Octodon_degus
ENSPKIG00000012116	sf1	90	73.481	ENSOANG00000002909	SF1	82	74.852	Ornithorhynchus_anatinus
ENSPKIG00000012116	sf1	88	74.499	ENSOCUG00000026486	SF1	52	79.580	Oryctolagus_cuniculus
ENSPKIG00000012116	sf1	88	74.499	ENSOGAG00000016196	SF1	51	79.880	Otolemur_garnettii
ENSPKIG00000012116	sf1	88	74.499	ENSOARG00000009166	SF1	57	79.580	Ovis_aries
ENSPKIG00000012116	sf1	87	75.000	ENSPPAG00000002799	-	78	79.580	Pan_paniscus
ENSPKIG00000012116	sf1	88	74.499	ENSPPRG00000013566	SF1	53	79.880	Panthera_pardus
ENSPKIG00000012116	sf1	88	74.499	ENSPTIG00000016141	SF1	60	78.824	Panthera_tigris_altaica
ENSPKIG00000012116	sf1	90	74.790	ENSPTRG00000003846	SF1	78	78.824	Pan_troglodytes
ENSPKIG00000012116	sf1	89	73.775	ENSPANG00000020754	SF1	76	78.834	Papio_anubis
ENSPKIG00000012116	sf1	81	75.851	ENSPSIG00000003610	SF1	57	79.661	Pelodiscus_sinensis
ENSPKIG00000012116	sf1	88	74.499	ENSPEMG00000010463	Sf1	58	78.529	Peromyscus_maniculatus_bairdii
ENSPKIG00000012116	sf1	88	74.499	ENSPCIG00000018173	SF1	53	79.880	Phascolarctos_cinereus
ENSPKIG00000012116	sf1	79	81.672	ENSPFOG00000013683	sf1	53	81.571	Poecilia_formosa
ENSPKIG00000012116	sf1	84	78.338	ENSPLAG00000018076	sf1	50	79.822	Poecilia_latipinna
ENSPKIG00000012116	sf1	79	80.126	ENSPMEG00000005726	sf1	51	80.119	Poecilia_mexicana
ENSPKIG00000012116	sf1	88	74.499	ENSPPYG00000003098	-	62	79.580	Pongo_abelii
ENSPKIG00000012116	sf1	89	73.563	ENSPCOG00000027546	SF1	77	79.341	Propithecus_coquereli
ENSPKIG00000012116	sf1	86	75.668	ENSRNOG00000021085	Sf1	67	78.529	Rattus_norvegicus
ENSPKIG00000012116	sf1	88	74.499	ENSRBIG00000042818	SF1	74	80.189	Rhinopithecus_bieti
ENSPKIG00000012116	sf1	88	74.499	ENSRROG00000045655	SF1	74	80.831	Rhinopithecus_roxellana
ENSPKIG00000012116	sf1	62	44.223	YLR116W	MSL5	50	43.874	Saccharomyces_cerevisiae
ENSPKIG00000012116	sf1	96	66.753	ENSSBOG00000022267	-	81	68.955	Saimiri_boliviensis_boliviensis
ENSPKIG00000012116	sf1	86	75.000	ENSSHAG00000006841	SF1	61	78.107	Sarcophilus_harrisii
ENSPKIG00000012116	sf1	88	76.667	ENSSMAG00000007549	sf1	52	79.480	Scophthalmus_maximus
ENSPKIG00000012116	sf1	79	80.757	ENSSDUG00000003903	sf1	50	82.493	Seriola_dumerili
ENSPKIG00000012116	sf1	88	73.352	ENSSARG00000008180	SF1	63	78.078	Sorex_araneus
ENSPKIG00000012116	sf1	92	74.550	ENSSPUG00000012907	SF1	56	78.613	Sphenodon_punctatus
ENSPKIG00000012116	sf1	88	74.499	ENSSSCG00000013021	SF1	60	79.880	Sus_scrofa
ENSPKIG00000012116	sf1	76	70.820	ENSTNIG00000004820	sf1	61	69.939	Tetraodon_nigroviridis
ENSPKIG00000012116	sf1	84	70.448	ENSTTRG00000008857	SF1	59	73.700	Tursiops_truncatus
ENSPKIG00000012116	sf1	74	75.084	ENSUAMG00000011977	SF1	55	76.871	Ursus_americanus
ENSPKIG00000012116	sf1	88	74.499	ENSUMAG00000007268	SF1	64	78.235	Ursus_maritimus
ENSPKIG00000012116	sf1	88	74.499	ENSVVUG00000028585	SF1	60	79.580	Vulpes_vulpes
ENSPKIG00000012116	sf1	93	73.727	ENSXETG00000008434	sf1	55	77.015	Xenopus_tropicalis
ENSPKIG00000012116	sf1	79	81.672	ENSXCOG00000003704	sf1	62	80.665	Xiphophorus_couchianus
ENSPKIG00000012116	sf1	79	79.495	ENSXMAG00000007822	sf1	50	79.228	Xiphophorus_maculatus