EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000012204 (Gene tree)
Gene ID
111854644
Gene Symbol
puf60b
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
26047 bases
Position
chrPGUA01000279.1:376653-402699
Accession
111854644
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000031975RRM_1PF00076.222.8e-4412
ENSPKIP00000031975RRM_1PF00076.222.8e-4422
ENSPKIP00000031936RRM_1PF00076.222.9e-4412
ENSPKIP00000031936RRM_1PF00076.222.9e-4422
ENSPKIP00000031883RRM_1PF00076.223e-4412
ENSPKIP00000031883RRM_1PF00076.223e-4422
ENSPKIP00000031950RRM_1PF00076.223e-4412
ENSPKIP00000031950RRM_1PF00076.223e-4422
ENSPKIP00000031911RRM_1PF00076.223.4e-4412
ENSPKIP00000031911RRM_1PF00076.223.4e-4422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000012769-5273-ENSPKIP00000031911525 (aa)XP_023688607UPI000CD655CB
ENSPKIT00000012833-1521-ENSPKIP00000031975506 (aa)--
ENSPKIT00000012794-5222-ENSPKIP00000031936508 (aa)XP_023688613UPI000CD612B8
ENSPKIT00000012740-5357-ENSPKIP00000031883512 (aa)XP_023688611UPI000CD6714E
ENSPKIT00000012808-4933-ENSPKIP00000031950512 (aa)XP_023688611UPI000CD6714E
Gene Model
Click here to download ENSPKIG00000012204's gene model file
Pathways
Pathway IDPathway NameSource
pki03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012204's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000012204puf60b5637.000ENSPKIG00000024346u2af2b6637.255
ENSPKIG00000012204puf60b5530.857ENSPKIG00000007322pabpc1l5530.857
ENSPKIG00000012204puf60b10091.683ENSPKIG00000004295puf60a9993.731
ENSPKIG00000012204puf60b6537.255ENSPKIG00000014878-8038.000
ENSPKIG00000012204puf60b5630.233ENSPKIG00000005676pabpc1b5430.233
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000012204puf60b10087.885ENSG00000179950PUF6010087.885Homo_sapiens
ENSPKIG00000012204puf60b10091.033ENSAPOG00000001713puf60b10089.544Acanthochromis_polyacanthus
ENSPKIG00000012204puf60b10085.962ENSAMEG00000006406PUF609384.981Ailuropoda_melanoleuca
ENSPKIG00000012204puf60b10080.000ENSACIG00000003263-9980.233Amphilophus_citrinellus
ENSPKIG00000012204puf60b10090.838ENSACIG00000021705puf60b10090.058Amphilophus_citrinellus
ENSPKIG00000012204puf60b10091.033ENSAOCG00000005395puf60b10090.253Amphiprion_ocellaris
ENSPKIG00000012204puf60b10085.185ENSAOCG00000015558-10085.171Amphiprion_ocellaris
ENSPKIG00000012204puf60b9988.048ENSAPEG00000011923puf60b9987.251Amphiprion_percula
ENSPKIG00000012204puf60b9878.514ENSAPEG00000001836-9979.084Amphiprion_percula
ENSPKIG00000012204puf60b10084.990ENSATEG00000006303-10084.791Anabas_testudineus
ENSPKIG00000012204puf60b10091.423ENSATEG00000001730puf60b10090.114Anabas_testudineus
ENSPKIG00000012204puf60b10088.462ENSAPLG00000010150PUF6010088.023Anas_platyrhynchos
ENSPKIG00000012204puf60b10088.145ENSACAG00000001645PUF609887.054Anolis_carolinensis
ENSPKIG00000012204puf60b10087.692ENSANAG00000018626PUF6010087.692Aotus_nancymaae
ENSPKIG00000012204puf60b10090.838ENSACLG00000004462puf60b10090.058Astatotilapia_calliptera
ENSPKIG00000012204puf60b10081.784ENSAMXG00000041030puf60b10080.455Astyanax_mexicanus
ENSPKIG00000012204puf60b10088.381ENSAMXG00000036570puf60a9890.909Astyanax_mexicanus
ENSPKIG00000012204puf60b10088.269ENSBTAG00000037493PUF6010086.891Bos_taurus
ENSPKIG00000012204puf60b8251.333WBGene00004389rnp-68852.303Caenorhabditis_elegans
ENSPKIG00000012204puf60b10087.885ENSCJAG00000021485PUF6010086.517Callithrix_jacchus
ENSPKIG00000012204puf60b10087.692ENSCAFG00000001400PUF609386.882Canis_familiaris
ENSPKIG00000012204puf60b10088.077ENSCAFG00020018754PUF6010086.704Canis_lupus_dingo
ENSPKIG00000012204puf60b10088.269ENSCHIG00000001618PUF608787.452Capra_hircus
ENSPKIG00000012204puf60b10088.077ENSTSYG00000011912PUF6010088.077Carlito_syrichta
ENSPKIG00000012204puf60b10083.397ENSCPOG00000014613PUF609482.453Cavia_porcellus
ENSPKIG00000012204puf60b10088.654ENSCCAG00000007744PUF6010086.704Cebus_capucinus
ENSPKIG00000012204puf60b10087.885ENSCATG00000035405PUF6010086.517Cercocebus_atys
ENSPKIG00000012204puf60b10088.269ENSCLAG00000009154PUF609387.452Chinchilla_lanigera
ENSPKIG00000012204puf60b10087.885ENSCSAG00000008878PUF6010087.885Chlorocebus_sabaeus
ENSPKIG00000012204puf60b10088.462ENSCPBG00000005595PUF609987.524Chrysemys_picta_bellii
ENSPKIG00000012204puf60b9950.192ENSCING00000008436-9849.336Ciona_intestinalis
ENSPKIG00000012204puf60b6161.420ENSCING00000002156-8861.420Ciona_intestinalis
ENSPKIG00000012204puf60b9754.962ENSCSAVG00000001385-9954.771Ciona_savignyi
ENSPKIG00000012204puf60b7360.630ENSCSAVG00000004765-9749.795Ciona_savignyi
ENSPKIG00000012204puf60b8186.936ENSCANG00000041843PUF6010086.936Colobus_angolensis_palliatus
ENSPKIG00000012204puf60b10088.269ENSCGRG00001017442Puf609387.452Cricetulus_griseus_chok1gshd
ENSPKIG00000012204puf60b10088.269ENSCGRG00000003717Puf609387.452Cricetulus_griseus_crigri
ENSPKIG00000012204puf60b9977.996ENSCSEG00000014845-9179.684Cynoglossus_semilaevis
ENSPKIG00000012204puf60b10091.228ENSCSEG00000019887puf60b9489.714Cynoglossus_semilaevis
ENSPKIG00000012204puf60b9183.726ENSCVAG00000001560-9883.726Cyprinodon_variegatus
ENSPKIG00000012204puf60b10090.448ENSCVAG00000009386puf60b10089.669Cyprinodon_variegatus
ENSPKIG00000012204puf60b10083.302ENSDARG00000001241puf60b9998.413Danio_rerio
ENSPKIG00000012204puf60b10089.981ENSDARG00000032175puf60a9993.617Danio_rerio
ENSPKIG00000012204puf60b9973.099ENSDNOG00000043278PUF609670.404Dasypus_novemcinctus
ENSPKIG00000012204puf60b10088.462ENSDORG00000004585Puf609587.643Dipodomys_ordii
ENSPKIG00000012204puf60b9750.775FBgn0028577hfp6258.580Drosophila_melanogaster
ENSPKIG00000012204puf60b9962.105ENSEBUG00000014291puf60b8364.851Eptatretus_burgeri
ENSPKIG00000012204puf60b9869.721ENSEBUG00000005470-8871.488Eptatretus_burgeri
ENSPKIG00000012204puf60b10088.077ENSEASG00005009695PUF6010086.704Equus_asinus_asinus
ENSPKIG00000012204puf60b10088.077ENSECAG00000024681PUF609787.262Equus_caballus
ENSPKIG00000012204puf60b10087.380ENSELUG00000006507puf60b10083.842Esox_lucius
ENSPKIG00000012204puf60b10091.683ENSELUG00000018443-10091.132Esox_lucius
ENSPKIG00000012204puf60b10088.077ENSFCAG00000001045PUF6010088.077Felis_catus
ENSPKIG00000012204puf60b10078.654ENSFALG00000001136PUF609978.261Ficedula_albicollis
ENSPKIG00000012204puf60b10088.077ENSFDAG00000017177PUF609387.452Fukomys_damarensis
ENSPKIG00000012204puf60b10090.838ENSFHEG00000020046puf60b10090.058Fundulus_heteroclitus
ENSPKIG00000012204puf60b9683.707ENSFHEG00000021687PUF6010084.407Fundulus_heteroclitus
ENSPKIG00000012204puf60b10077.606ENSGMOG00000006392puf60b10075.763Gadus_morhua
ENSPKIG00000012204puf60b6692.420ENSGALG00000039901PUF609492.420Gallus_gallus
ENSPKIG00000012204puf60b10091.033ENSGAFG00000021040puf60b10090.253Gambusia_affinis
ENSPKIG00000012204puf60b10082.296ENSGAFG00000004334-9982.305Gambusia_affinis
ENSPKIG00000012204puf60b10078.752ENSGACG00000004717puf60b9878.420Gasterosteus_aculeatus
ENSPKIG00000012204puf60b10073.684ENSGACG00000001484-10072.710Gasterosteus_aculeatus
ENSPKIG00000012204puf60b10088.462ENSGAGG00000013289PUF609188.654Gopherus_agassizii
ENSPKIG00000012204puf60b10087.885ENSGGOG00000004646PUF6010086.517Gorilla_gorilla
ENSPKIG00000012204puf60b10090.838ENSHBUG00000015118puf60b10090.058Haplochromis_burtoni
ENSPKIG00000012204puf60b10085.049ENSHBUG00000009634-10085.141Haplochromis_burtoni
ENSPKIG00000012204puf60b10088.077ENSHGLG00000006111PUF609387.452Heterocephalus_glaber_female
ENSPKIG00000012204puf60b10088.077ENSHGLG00100012362PUF609387.452Heterocephalus_glaber_male
ENSPKIG00000012204puf60b10087.406ENSHCOG00000015541puf60b10087.079Hippocampus_comes
ENSPKIG00000012204puf60b9869.505ENSHCOG00000000378-9967.235Hippocampus_comes
ENSPKIG00000012204puf60b10086.590ENSIPUG00000002453puf60a9986.733Ictalurus_punctatus
ENSPKIG00000012204puf60b10083.144ENSIPUG00000004660puf60b9982.950Ictalurus_punctatus
ENSPKIG00000012204puf60b10088.269ENSSTOG00000025037PUF609487.452Ictidomys_tridecemlineatus
ENSPKIG00000012204puf60b10088.269ENSJJAG00000001076Puf609387.452Jaculus_jaculus
ENSPKIG00000012204puf60b10081.226ENSKMAG00000010106-10081.226Kryptolebias_marmoratus
ENSPKIG00000012204puf60b10091.033ENSKMAG00000016745puf60b10090.448Kryptolebias_marmoratus
ENSPKIG00000012204puf60b10088.312ENSLBEG00000012505puf60b10088.312Labrus_bergylta
ENSPKIG00000012204puf60b7182.385ENSLACG00000005456PUF6010082.609Latimeria_chalumnae
ENSPKIG00000012204puf60b10093.580ENSLOCG00000010106puf60b10092.979Lepisosteus_oculatus
ENSPKIG00000012204puf60b10086.923ENSLAFG00000022929PUF609486.122Loxodonta_africana
ENSPKIG00000012204puf60b10087.885ENSMFAG00000043373PUF6010086.517Macaca_fascicularis
ENSPKIG00000012204puf60b10087.885ENSMMUG00000013558PUF6010086.517Macaca_mulatta
ENSPKIG00000012204puf60b10087.885ENSMNEG00000031099PUF6010086.517Macaca_nemestrina
ENSPKIG00000012204puf60b10087.885ENSMLEG00000040009PUF6010087.885Mandrillus_leucophaeus
ENSPKIG00000012204puf60b10090.058ENSMAMG00000010394puf60b10087.097Mastacembelus_armatus
ENSPKIG00000012204puf60b10085.409ENSMAMG00000019476-10085.199Mastacembelus_armatus
ENSPKIG00000012204puf60b10090.838ENSMZEG00005018515puf60b10090.058Maylandia_zebra
ENSPKIG00000012204puf60b10085.049ENSMZEG00005019425-10084.280Maylandia_zebra
ENSPKIG00000012204puf60b10088.462ENSMGAG00000013070PUF609592.733Meleagris_gallopavo
ENSPKIG00000012204puf60b6991.944ENSMAUG00000014267-9090.710Mesocricetus_auratus
ENSPKIG00000012204puf60b9669.980ENSMAUG00000018549-9572.222Mesocricetus_auratus
ENSPKIG00000012204puf60b10088.077ENSMICG00000012226PUF6010086.704Microcebus_murinus
ENSPKIG00000012204puf60b10088.269ENSMOCG00000018780Puf609387.452Microtus_ochrogaster
ENSPKIG00000012204puf60b10091.033ENSMMOG00000004217puf60b10090.253Mola_mola
ENSPKIG00000012204puf60b9976.938ENSMMOG00000018059-9978.161Mola_mola
ENSPKIG00000012204puf60b10087.692ENSMODG00000009161PUF609487.033Monodelphis_domestica
ENSPKIG00000012204puf60b10084.466ENSMALG00000000200-10083.712Monopterus_albus
ENSPKIG00000012204puf60b10083.041ENSMALG00000006797puf60b10081.749Monopterus_albus
ENSPKIG00000012204puf60b10088.077MGP_CAROLIEiJ_G0019910Puf609387.452Mus_caroli
ENSPKIG00000012204puf60b10088.077ENSMUSG00000002524Puf609387.452Mus_musculus
ENSPKIG00000012204puf60b10088.077MGP_PahariEiJ_G0019920Puf609387.452Mus_pahari
ENSPKIG00000012204puf60b10088.077MGP_SPRETEiJ_G0020812Puf609387.452Mus_spretus
ENSPKIG00000012204puf60b10087.885ENSMPUG00000008137PUF609287.072Mustela_putorius_furo
ENSPKIG00000012204puf60b9983.170ENSMLUG00000013032-9983.170Myotis_lucifugus
ENSPKIG00000012204puf60b10087.308ENSMLUG00000000238-9386.502Myotis_lucifugus
ENSPKIG00000012204puf60b10088.269ENSNGAG00000000712Puf6010088.269Nannospalax_galili
ENSPKIG00000012204puf60b10085.380ENSNBRG00000017223-10084.791Neolamprologus_brichardi
ENSPKIG00000012204puf60b8387.615ENSNBRG00000013047puf60b9788.489Neolamprologus_brichardi
ENSPKIG00000012204puf60b10087.885ENSNLEG00000002156PUF6010086.074Nomascus_leucogenys
ENSPKIG00000012204puf60b7597.952ENSOPRG00000002147PUF607597.952Ochotona_princeps
ENSPKIG00000012204puf60b7193.750ENSODEG00000014024-9093.750Octodon_degus
ENSPKIG00000012204puf60b9866.601ENSODEG00000015513-9664.717Octodon_degus
ENSPKIG00000012204puf60b10090.838ENSONIG00000006247puf60b9889.981Oreochromis_niloticus
ENSPKIG00000012204puf60b10085.243ENSONIG00000014030-9983.712Oreochromis_niloticus
ENSPKIG00000012204puf60b9773.506ENSOANG00000006962PUF609973.529Ornithorhynchus_anatinus
ENSPKIG00000012204puf60b9983.654ENSORLG00000028655-9983.044Oryzias_latipes
ENSPKIG00000012204puf60b10091.033ENSORLG00000012279puf60b10090.253Oryzias_latipes
ENSPKIG00000012204puf60b10091.033ENSORLG00020007333puf6010090.253Oryzias_latipes_hni
ENSPKIG00000012204puf60b9984.302ENSORLG00020018144-9983.144Oryzias_latipes_hni
ENSPKIG00000012204puf60b10089.903ENSORLG00015007718puf60b10089.903Oryzias_latipes_hsok
ENSPKIG00000012204puf60b9984.302ENSORLG00015016833-9982.955Oryzias_latipes_hsok
ENSPKIG00000012204puf60b9983.821ENSOMEG00000022185-9983.270Oryzias_melastigma
ENSPKIG00000012204puf60b10089.122ENSOMEG00000001643puf60b10087.709Oryzias_melastigma
ENSPKIG00000012204puf60b10088.269ENSOGAG00000006259PUF609387.452Otolemur_garnettii
ENSPKIG00000012204puf60b10086.654ENSOARG00000016235PUF609885.851Ovis_aries
ENSPKIG00000012204puf60b10087.885ENSPPAG00000029933PUF6010086.517Pan_paniscus
ENSPKIG00000012204puf60b10088.077ENSPPRG00000003257PUF6010088.077Panthera_pardus
ENSPKIG00000012204puf60b10085.769ENSPTIG00000009795PUF6010084.557Panthera_tigris_altaica
ENSPKIG00000012204puf60b10087.885ENSPTRG00000020670PUF6010086.517Pan_troglodytes
ENSPKIG00000012204puf60b10087.885ENSPTRG00000043963-9986.957Pan_troglodytes
ENSPKIG00000012204puf60b10087.885ENSPANG00000021936PUF6010086.517Papio_anubis
ENSPKIG00000012204puf60b10088.077ENSPSIG00000004679PUF609987.643Pelodiscus_sinensis
ENSPKIG00000012204puf60b10089.147ENSPMGG00000013444puf60b10088.417Periophthalmus_magnuspinnatus
ENSPKIG00000012204puf60b10088.269ENSPEMG00000008820Puf609387.452Peromyscus_maniculatus_bairdii
ENSPKIG00000012204puf60b10088.269ENSPCIG00000020270PUF609888.269Phascolarctos_cinereus
ENSPKIG00000012204puf60b10091.033ENSPFOG00000019217puf60b9989.841Poecilia_formosa
ENSPKIG00000012204puf60b10083.689ENSPFOG00000011118-10083.302Poecilia_formosa
ENSPKIG00000012204puf60b10083.495ENSPLAG00000017025-9282.732Poecilia_latipinna
ENSPKIG00000012204puf60b10091.033ENSPLAG00000010754puf60b10090.253Poecilia_latipinna
ENSPKIG00000012204puf60b10083.689ENSPMEG00000009767-9283.302Poecilia_mexicana
ENSPKIG00000012204puf60b10091.033ENSPMEG00000000838puf60b10090.253Poecilia_mexicana
ENSPKIG00000012204puf60b10088.046ENSPREG00000005440puf60b10088.105Poecilia_reticulata
ENSPKIG00000012204puf60b8185.273ENSPPYG00000018951-9585.273Pongo_abelii
ENSPKIG00000012204puf60b8186.936ENSPCAG00000014837PUF6010086.936Procavia_capensis
ENSPKIG00000012204puf60b10087.885ENSPCOG00000027981PUF6010086.517Propithecus_coquereli
ENSPKIG00000012204puf60b10098.101ENSPVAG00000016167PUF608198.101Pteropus_vampyrus
ENSPKIG00000012204puf60b10085.049ENSPNYG00000004273-10084.280Pundamilia_nyererei
ENSPKIG00000012204puf60b10090.838ENSPNYG00000002556puf60b10090.058Pundamilia_nyererei
ENSPKIG00000012204puf60b9983.532ENSPNAG00000019415puf60b9183.730Pygocentrus_nattereri
ENSPKIG00000012204puf60b9989.109ENSPNAG00000019909puf60a9990.693Pygocentrus_nattereri
ENSPKIG00000012204puf60b10088.077ENSRNOG00000009960Puf609387.452Rattus_norvegicus
ENSPKIG00000012204puf60b10087.885ENSRBIG00000035274PUF6010086.517Rhinopithecus_bieti
ENSPKIG00000012204puf60b10087.885ENSRROG00000029360PUF6010086.517Rhinopithecus_roxellana
ENSPKIG00000012204puf60b10086.538ENSSBOG00000027089PUF609985.150Saimiri_boliviensis_boliviensis
ENSPKIG00000012204puf60b9086.966ENSSHAG00000006668PUF609086.076Sarcophilus_harrisii
ENSPKIG00000012204puf60b10086.372ENSSFOG00015019619puf60b9989.817Scleropages_formosus
ENSPKIG00000012204puf60b9592.464ENSSFOG00015019371puf60a9892.668Scleropages_formosus
ENSPKIG00000012204puf60b7395.668ENSSMAG00000016381puf60b7594.483Scophthalmus_maximus
ENSPKIG00000012204puf60b10089.504ENSSDUG00000009935puf60b9988.740Seriola_dumerili
ENSPKIG00000012204puf60b9784.493ENSSDUG00000007048-9784.540Seriola_dumerili
ENSPKIG00000012204puf60b10082.852ENSSLDG00000007366-9983.269Seriola_lalandi_dorsalis
ENSPKIG00000012204puf60b10091.423ENSSLDG00000024011puf60b10088.235Seriola_lalandi_dorsalis
ENSPKIG00000012204puf60b6580.531ENSSPUG00000013518PUF609281.212Sphenodon_punctatus
ENSPKIG00000012204puf60b10084.854ENSSPAG00000020285-10085.437Stegastes_partitus
ENSPKIG00000012204puf60b10088.235ENSSPAG00000012144puf60b10088.046Stegastes_partitus
ENSPKIG00000012204puf60b10088.077ENSSSCG00000038800PUF6010086.267Sus_scrofa
ENSPKIG00000012204puf60b10085.742ENSTGUG00000012797-10085.714Taeniopygia_guttata
ENSPKIG00000012204puf60b10090.253ENSTRUG00000005420puf60b10087.856Takifugu_rubripes
ENSPKIG00000012204puf60b9883.669ENSTRUG00000008843-10082.661Takifugu_rubripes
ENSPKIG00000012204puf60b10090.058ENSTNIG00000013675puf60b9990.058Tetraodon_nigroviridis
ENSPKIG00000012204puf60b10081.641ENSTNIG00000003069-9981.445Tetraodon_nigroviridis
ENSPKIG00000012204puf60b7769.143ENSTBEG00000001899-10069.714Tupaia_belangeri
ENSPKIG00000012204puf60b5786.913ENSTBEG00000002751-9788.316Tupaia_belangeri
ENSPKIG00000012204puf60b10087.115ENSTTRG00000017088PUF6010087.308Tursiops_truncatus
ENSPKIG00000012204puf60b10088.077ENSUAMG00000024917PUF6010086.704Ursus_americanus
ENSPKIG00000012204puf60b10082.885ENSUMAG00000000272PUF609381.939Ursus_maritimus
ENSPKIG00000012204puf60b10088.077ENSVVUG00000022527PUF6010088.077Vulpes_vulpes
ENSPKIG00000012204puf60b10087.500ENSXETG00000012469puf609986.931Xenopus_tropicalis
ENSPKIG00000012204puf60b9890.726ENSXCOG00000012355puf60b10089.919Xiphophorus_couchianus
ENSPKIG00000012204puf60b10091.033ENSXMAG00000001862puf60b10090.253Xiphophorus_maculatus
ENSPKIG00000012204puf60b9983.101ENSXMAG00000010507-9982.704Xiphophorus_maculatus

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