EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000012274 (Gene tree)
Gene ID: 111860744
Gene Symbol: tbrg1
Alias: -
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 8096 bases
Position: chrPGUA01000112.1:1945978-1954073
Accession: ZDB-GENE-080220-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000032109	HARE-HTH	PF05066.13	1.8e-15	1	1
ENSPKIP00000032039	HARE-HTH	PF05066.13	2e-15	1	1
ENSPKIP00000032071	HARE-HTH	PF05066.13	7.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000012897	-	3681	-	ENSPKIP00000032039	606 (aa)	-	-
ENSPKIT00000013025	-	1134	-	ENSPKIP00000032166	377 (aa)	-	-
ENSPKIT00000012968	-	2387	-	ENSPKIP00000032109	577 (aa)	-	-
ENSPKIT00000012930	-	3618	-	ENSPKIP00000032071	585 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000012274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000012274	tbrg1	92	72.336	ENSAPOG00000017352	tbrg1	95	73.603	Acanthochromis_polyacanthus
ENSPKIG00000012274	tbrg1	87	71.344	ENSACIG00000021274	tbrg1	94	71.146	Amphilophus_citrinellus
ENSPKIG00000012274	tbrg1	92	71.992	ENSAOCG00000018605	tbrg1	95	73.410	Amphiprion_ocellaris
ENSPKIG00000012274	tbrg1	92	71.992	ENSAPEG00000022443	tbrg1	95	73.410	Amphiprion_percula
ENSPKIG00000012274	tbrg1	90	74.280	ENSATEG00000023537	tbrg1	95	74.131	Anabas_testudineus
ENSPKIG00000012274	tbrg1	90	73.946	ENSACLG00000000281	tbrg1	95	73.796	Astatotilapia_calliptera
ENSPKIG00000012274	tbrg1	92	73.358	ENSAMXG00000008381	tbrg1	96	73.358	Astyanax_mexicanus
ENSPKIG00000012274	tbrg1	89	70.656	ENSCSEG00000002445	tbrg1	95	71.042	Cynoglossus_semilaevis
ENSPKIG00000012274	tbrg1	89	69.943	ENSCVAG00000019626	tbrg1	95	69.663	Cyprinodon_variegatus
ENSPKIG00000012274	tbrg1	89	71.401	ENSDARG00000074996	tbrg1	93	72.107	Danio_rerio
ENSPKIG00000012274	tbrg1	89	48.771	ENSEBUG00000014060	tbrg1	97	47.969	Eptatretus_burgeri
ENSPKIG00000012274	tbrg1	99	74.266	ENSELUG00000017458	tbrg1	98	75.373	Esox_lucius
ENSPKIG00000012274	tbrg1	83	66.265	ENSFHEG00000004283	tbrg1	93	65.594	Fundulus_heteroclitus
ENSPKIG00000012274	tbrg1	89	70.888	ENSGAFG00000000204	tbrg1	95	70.888	Gambusia_affinis
ENSPKIG00000012274	tbrg1	90	73.946	ENSHBUG00000004935	tbrg1	95	73.796	Haplochromis_burtoni
ENSPKIG00000012274	tbrg1	87	69.727	ENSHCOG00000010588	tbrg1	93	69.922	Hippocampus_comes
ENSPKIG00000012274	tbrg1	88	74.118	ENSIPUG00000008697	tbrg1	94	75.162	Ictalurus_punctatus
ENSPKIG00000012274	tbrg1	89	71.923	ENSKMAG00000002775	tbrg1	95	72.115	Kryptolebias_marmoratus
ENSPKIG00000012274	tbrg1	94	70.567	ENSLBEG00000017559	tbrg1	94	73.663	Labrus_bergylta
ENSPKIG00000012274	tbrg1	89	79.297	ENSLOCG00000003093	tbrg1	93	79.297	Lepisosteus_oculatus
ENSPKIG00000012274	tbrg1	90	73.129	ENSMAMG00000000876	tbrg1	95	72.973	Mastacembelus_armatus
ENSPKIG00000012274	tbrg1	90	72.952	ENSMZEG00005013545	tbrg1	88	72.952	Maylandia_zebra
ENSPKIG00000012274	tbrg1	90	70.132	ENSMMOG00000005314	tbrg1	95	69.376	Mola_mola
ENSPKIG00000012274	tbrg1	88	73.386	ENSMALG00000011630	tbrg1	99	73.084	Monopterus_albus
ENSPKIG00000012274	tbrg1	88	74.460	ENSNBRG00000017490	tbrg1	96	74.460	Neolamprologus_brichardi
ENSPKIG00000012274	tbrg1	89	73.410	ENSONIG00000005284	tbrg1	95	73.410	Oreochromis_niloticus
ENSPKIG00000012274	tbrg1	90	70.825	ENSORLG00000014519	tbrg1	95	71.042	Oryzias_latipes
ENSPKIG00000012274	tbrg1	90	70.441	ENSORLG00020009567	tbrg1	95	70.656	Oryzias_latipes_hni
ENSPKIG00000012274	tbrg1	90	71.017	ENSORLG00015000448	tbrg1	95	71.236	Oryzias_latipes_hsok
ENSPKIG00000012274	tbrg1	90	72.467	ENSOMEG00000006130	tbrg1	95	72.534	Oryzias_melastigma
ENSPKIG00000012274	tbrg1	87	73.611	ENSPMGG00000015968	tbrg1	92	73.611	Periophthalmus_magnuspinnatus
ENSPKIG00000012274	tbrg1	89	72.000	ENSPFOG00000004279	tbrg1	95	72.000	Poecilia_formosa
ENSPKIG00000012274	tbrg1	89	71.619	ENSPLAG00000001227	tbrg1	97	72.039	Poecilia_latipinna
ENSPKIG00000012274	tbrg1	89	72.000	ENSPMEG00000000955	tbrg1	95	72.031	Poecilia_mexicana
ENSPKIG00000012274	tbrg1	89	71.048	ENSPREG00000005246	tbrg1	95	71.264	Poecilia_reticulata
ENSPKIG00000012274	tbrg1	77	73.836	ENSPNYG00000012625	tbrg1	94	73.836	Pundamilia_nyererei
ENSPKIG00000012274	tbrg1	92	72.744	ENSPNAG00000028332	tbrg1	97	74.134	Pygocentrus_nattereri
ENSPKIG00000012274	tbrg1	89	81.409	ENSSFOG00015009308	tbrg1	89	80.769	Scleropages_formosus
ENSPKIG00000012274	tbrg1	91	72.159	ENSSMAG00000002529	tbrg1	98	72.481	Scophthalmus_maximus
ENSPKIG00000012274	tbrg1	90	72.264	ENSSDUG00000013674	tbrg1	97	72.264	Seriola_dumerili
ENSPKIG00000012274	tbrg1	89	72.500	ENSSLDG00000008932	tbrg1	99	72.500	Seriola_lalandi_dorsalis
ENSPKIG00000012274	tbrg1	80	74.518	ENSSPAG00000004808	tbrg1	99	74.518	Stegastes_partitus
ENSPKIG00000012274	tbrg1	89	69.691	ENSTRUG00000005960	tbrg1	98	69.691	Takifugu_rubripes
ENSPKIG00000012274	tbrg1	89	70.321	ENSXMAG00000001551	tbrg1	95	70.321	Xiphophorus_maculatus