EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000012306 (Gene tree)
Gene ID: 111847765
Gene Symbol: MBD4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 3608 bases
Position: chrPGUA01000172.1:1125572-1129179
Accession: 111847765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000032055	MBD	PF01429.19	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000012913	MBD4-201	1767	-	ENSPKIP00000032055	588 (aa)	XP_023675009	UPI000CD5DA53

Gene Model

Click here to download ENSPKIG00000012306's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000012306	MBD4	75	45.781	ENSAPOG00000021668	mbd4	95	47.009	Acanthochromis_polyacanthus
ENSPKIG00000012306	MBD4	75	46.429	ENSAOCG00000001157	mbd4	95	48.305	Amphiprion_ocellaris
ENSPKIG00000012306	MBD4	75	46.639	ENSAPEG00000016131	mbd4	95	46.849	Amphiprion_percula
ENSPKIG00000012306	MBD4	76	46.526	ENSATEG00000014594	MBD4	87	46.526	Anabas_testudineus
ENSPKIG00000012306	MBD4	75	41.964	ENSAMXG00000017271	mbd4	91	41.964	Astyanax_mexicanus
ENSPKIG00000012306	MBD4	75	40.000	ENSEBUG00000010816	mbd4	99	40.000	Eptatretus_burgeri
ENSPKIG00000012306	MBD4	78	41.590	ENSELUG00000018483	MBD4	86	41.590	Esox_lucius
ENSPKIG00000012306	MBD4	75	44.668	ENSGMOG00000013830	mbd4	100	44.668	Gadus_morhua
ENSPKIG00000012306	MBD4	76	44.703	ENSGAFG00000016011	mbd4	99	44.255	Gambusia_affinis
ENSPKIG00000012306	MBD4	75	43.629	ENSKMAG00000015015	mbd4	97	44.654	Kryptolebias_marmoratus
ENSPKIG00000012306	MBD4	75	46.104	ENSLBEG00000005669	MBD4	86	46.104	Labrus_bergylta
ENSPKIG00000012306	MBD4	76	45.136	ENSLOCG00000013054	MBD4	99	45.720	Lepisosteus_oculatus
ENSPKIG00000012306	MBD4	75	42.998	ENSLAFG00000010609	MBD4	86	42.998	Loxodonta_africana
ENSPKIG00000012306	MBD4	50	63.636	ENSMICG00000008022	MBD4	52	63.636	Microcebus_murinus
ENSPKIG00000012306	MBD4	78	45.808	ENSMALG00000021517	mbd4	90	45.808	Monopterus_albus
ENSPKIG00000012306	MBD4	75	46.653	ENSONIG00000017212	mbd4	100	46.653	Oreochromis_niloticus
ENSPKIG00000012306	MBD4	75	39.243	ENSOCUG00000013006	MBD4	86	39.243	Oryctolagus_cuniculus
ENSPKIG00000012306	MBD4	76	49.342	ENSORLG00000011049	mbd4	99	49.342	Oryzias_latipes
ENSPKIG00000012306	MBD4	76	46.809	ENSORLG00020020013	mbd4	99	47.495	Oryzias_latipes_hni
ENSPKIG00000012306	MBD4	76	49.231	ENSORLG00015015342	mbd4	99	49.231	Oryzias_latipes_hsok
ENSPKIG00000012306	MBD4	76	49.119	ENSOMEG00000008819	mbd4	92	49.119	Oryzias_melastigma
ENSPKIG00000012306	MBD4	50	64.317	ENSOARG00000014699	MBD4	55	64.317	Ovis_aries
ENSPKIG00000012306	MBD4	58	68.932	ENSPSIG00000007892	MBD4	57	68.932	Pelodiscus_sinensis
ENSPKIG00000012306	MBD4	75	46.753	ENSPFOG00000014471	mbd4	98	45.923	Poecilia_formosa
ENSPKIG00000012306	MBD4	50	73.750	ENSPCAG00000012915	MBD4	52	73.750	Procavia_capensis
ENSPKIG00000012306	MBD4	75	54.329	ENSSFOG00015016292	mbd4	96	54.329	Scleropages_formosus
ENSPKIG00000012306	MBD4	76	47.246	ENSSMAG00000013958	-	69	47.458	Scophthalmus_maximus
ENSPKIG00000012306	MBD4	76	48.069	ENSSDUG00000001365	mbd4	94	48.069	Seriola_dumerili
ENSPKIG00000012306	MBD4	65	39.901	ENSSLDG00000010295	MBD4	81	39.901	Seriola_lalandi_dorsalis
ENSPKIG00000012306	MBD4	51	63.404	ENSSPUG00000017344	MBD4	55	63.404	Sphenodon_punctatus
ENSPKIG00000012306	MBD4	77	42.316	ENSTRUG00000010124	mbd4	98	42.316	Takifugu_rubripes
ENSPKIG00000012306	MBD4	75	43.778	ENSTNIG00000017927	mbd4	100	43.778	Tetraodon_nigroviridis
ENSPKIG00000012306	MBD4	83	41.910	ENSXETG00000026622	mbd4	99	41.910	Xenopus_tropicalis
ENSPKIG00000012306	MBD4	76	46.285	ENSXMAG00000021129	mbd4	99	45.223	Xiphophorus_maculatus