EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000012314 (Gene tree)
Gene ID: 111847262
Gene Symbol: fam172a
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 158021 bases
Position: chrPGUA01000167.1:709052-867072
Accession: 111847262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000032276	Arb2	PF09757.9	3e-07	1	1
ENSPKIP00000032248	Arb2	PF09757.9	3.1e-07	1	1
ENSPKIP00000032073	Arb2	PF09757.9	3.2e-07	1	1
ENSPKIP00000032301	Arb2	PF09757.9	3.3e-07	1	1
ENSPKIP00000032129	Arb2	PF09757.9	3.6e-07	1	1
ENSPKIP00000032323	Arb2	PF09757.9	3.6e-07	1	1
ENSPKIP00000032096	Arb2	PF09757.9	4.8e-07	1	1
ENSPKIP00000032346	Arb2	PF09757.9	9.6e-07	1	1
ENSPKIP00000032264	Arb2	PF09757.9	2.5e-06	1	1
ENSPKIP00000032377	Arb2	PF09757.9	2.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000013135	-	4060	-	ENSPKIP00000032276	379 (aa)	-	-
ENSPKIT00000013123	-	1227	-	ENSPKIP00000032264	341 (aa)	XP_023674048	UPI000CD631E1
ENSPKIT00000013107	-	6242	-	ENSPKIP00000032248	389 (aa)	-	-
ENSPKIT00000012955	-	6682	-	ENSPKIP00000032096	452 (aa)	-	-
ENSPKIT00000012988	-	6550	-	ENSPKIP00000032129	408 (aa)	-	-
ENSPKIT00000013206	-	984	-	ENSPKIP00000032346	327 (aa)	-	-
ENSPKIT00000013183	-	6297	-	ENSPKIP00000032323	408 (aa)	-	-
ENSPKIT00000013239	-	945	-	ENSPKIP00000032377	314 (aa)	-	-
ENSPKIT00000013160	-	1383	XM_023818278	ENSPKIP00000032301	393 (aa)	XP_023674046	UPI000CD66B11
ENSPKIT00000012932	-	2204	-	ENSPKIP00000032073	388 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000012314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000012314	fam172a	96	83.516	ENSG00000113391	FAM172A	97	74.167	Homo_sapiens
ENSPKIG00000012314	fam172a	71	37.768	ENSAPLG00000011555	-	98	36.481	Anas_platyrhynchos
ENSPKIG00000012314	fam172a	98	78.947	ENSAPLG00000004055	FAM172A	95	73.485	Anas_platyrhynchos
ENSPKIG00000012314	fam172a	98	72.414	ENSACAG00000013305	FAM172A	99	70.833	Anolis_carolinensis
ENSPKIG00000012314	fam172a	94	69.613	ENSANAG00000035869	FAM172A	97	65.990	Aotus_nancymaae
ENSPKIG00000012314	fam172a	96	83.516	ENSBTAG00000050195	FAM172A	97	72.660	Bos_taurus
ENSPKIG00000012314	fam172a	96	83.516	ENSCJAG00000010444	FAM172A	97	72.906	Callithrix_jacchus
ENSPKIG00000012314	fam172a	93	75.487	ENSCAFG00000008064	FAM172A	99	73.784	Canis_familiaris
ENSPKIG00000012314	fam172a	91	92.647	ENSCAFG00020006210	FAM172A	97	72.525	Canis_lupus_dingo
ENSPKIG00000012314	fam172a	96	83.516	ENSCHIG00000008440	FAM172A	97	72.660	Capra_hircus
ENSPKIG00000012314	fam172a	70	72.659	ENSTSYG00000006286	FAM172A	85	72.659	Carlito_syrichta
ENSPKIG00000012314	fam172a	69	74.227	ENSCAPG00000014103	-	100	74.227	Cavia_aperea
ENSPKIG00000012314	fam172a	96	83.516	ENSCCAG00000023116	FAM172A	97	74.722	Cebus_capucinus
ENSPKIG00000012314	fam172a	96	73.315	ENSCLAG00000005472	FAM172A	98	83.544	Chinchilla_lanigera
ENSPKIG00000012314	fam172a	89	43.099	ENSCPBG00000004402	-	97	40.988	Chrysemys_picta_bellii
ENSPKIG00000012314	fam172a	72	70.545	ENSCANG00000040412	FAM172A	92	71.587	Colobus_angolensis_palliatus
ENSPKIG00000012314	fam172a	96	83.333	ENSDNOG00000004689	FAM172A	97	72.906	Dasypus_novemcinctus
ENSPKIG00000012314	fam172a	73	69.965	ENSDORG00000013558	Fam172a	92	69.751	Dipodomys_ordii
ENSPKIG00000012314	fam172a	85	41.071	ENSEBUG00000016097	-	62	41.071	Eptatretus_burgeri
ENSPKIG00000012314	fam172a	91	92.647	ENSECAG00000018274	FAM172A	98	72.703	Equus_caballus
ENSPKIG00000012314	fam172a	77	95.455	ENSEEUG00000002887	FAM172A	97	61.084	Erinaceus_europaeus
ENSPKIG00000012314	fam172a	98	81.915	ENSELUG00000017647	fam172a	95	74.065	Esox_lucius
ENSPKIG00000012314	fam172a	96	83.516	ENSFCAG00000025443	FAM172A	97	72.906	Felis_catus
ENSPKIG00000012314	fam172a	95	73.315	ENSFALG00000009072	FAM172A	99	74.255	Ficedula_albicollis
ENSPKIG00000012314	fam172a	79	54.762	ENSFALG00000006501	-	98	41.176	Ficedula_albicollis
ENSPKIG00000012314	fam172a	97	78.723	ENSGALG00000014661	FAM172A	95	74.177	Gallus_gallus
ENSPKIG00000012314	fam172a	81	52.381	ENSGAGG00000022828	-	94	42.988	Gopherus_agassizii
ENSPKIG00000012314	fam172a	98	82.105	ENSGAGG00000003839	FAM172A	94	74.619	Gopherus_agassizii
ENSPKIG00000012314	fam172a	96	83.516	ENSGGOG00000010296	FAM172A	97	72.414	Gorilla_gorilla
ENSPKIG00000012314	fam172a	96	83.516	ENSHGLG00000011178	FAM172A	85	84.810	Heterocephalus_glaber_female
ENSPKIG00000012314	fam172a	93	74.860	ENSHGLG00100013340	FAM172A	100	84.810	Heterocephalus_glaber_male
ENSPKIG00000012314	fam172a	96	83.516	ENSSTOG00000009918	FAM172A	97	72.906	Ictidomys_tridecemlineatus
ENSPKIG00000012314	fam172a	92	47.222	ENSLACG00000001532	si:ch73-41e3.7	94	46.499	Latimeria_chalumnae
ENSPKIG00000012314	fam172a	98	86.170	ENSLOCG00000001629	fam172a	97	80.893	Lepisosteus_oculatus
ENSPKIG00000012314	fam172a	72	70.545	ENSMFAG00000001171	FAM172A	92	71.587	Macaca_fascicularis
ENSPKIG00000012314	fam172a	91	92.647	ENSMNEG00000039938	FAM172A	92	71.587	Macaca_nemestrina
ENSPKIG00000012314	fam172a	91	92.647	ENSMICG00000030403	FAM172A	97	72.906	Microcebus_murinus
ENSPKIG00000012314	fam172a	87	91.228	ENSMOCG00000003613	Fam172a	97	74.722	Microtus_ochrogaster
ENSPKIG00000012314	fam172a	100	75.728	ENSMODG00000020131	FAM172A	97	71.675	Monodelphis_domestica
ENSPKIG00000012314	fam172a	87	67.419	MGP_PahariEiJ_G0015818	Fam172a	100	67.742	Mus_pahari
ENSPKIG00000012314	fam172a	87	91.228	ENSNGAG00000019570	Fam172a	97	74.722	Nannospalax_galili
ENSPKIG00000012314	fam172a	73	70.036	ENSNLEG00000013903	FAM172A	94	67.944	Nomascus_leucogenys
ENSPKIG00000012314	fam172a	97	71.850	ENSOANG00000011068	FAM172A	99	71.968	Ornithorhynchus_anatinus
ENSPKIG00000012314	fam172a	93	82.418	ENSOCUG00000007299	FAM172A	97	71.883	Oryctolagus_cuniculus
ENSPKIG00000012314	fam172a	96	80.220	ENSOGAG00000015189	FAM172A	97	72.414	Otolemur_garnettii
ENSPKIG00000012314	fam172a	85	83.516	ENSOARG00000016711	FAM172A	87	72.251	Ovis_aries
ENSPKIG00000012314	fam172a	72	70.545	ENSPPAG00000030542	FAM172A	92	71.587	Pan_paniscus
ENSPKIG00000012314	fam172a	96	83.516	ENSPPRG00000006653	FAM172A	97	72.906	Panthera_pardus
ENSPKIG00000012314	fam172a	91	92.647	ENSPTIG00000012681	FAM172A	97	72.906	Panthera_tigris_altaica
ENSPKIG00000012314	fam172a	72	70.545	ENSPTRG00000017074	FAM172A	92	71.587	Pan_troglodytes
ENSPKIG00000012314	fam172a	72	70.545	ENSPANG00000011687	FAM172A	92	71.587	Papio_anubis
ENSPKIG00000012314	fam172a	50	71.154	ENSPSIG00000010144	-	99	70.370	Pelodiscus_sinensis
ENSPKIG00000012314	fam172a	100	76.699	ENSPEMG00000009604	-	97	72.660	Peromyscus_maniculatus_bairdii
ENSPKIG00000012314	fam172a	100	75.728	ENSPCIG00000028612	FAM172A	97	71.675	Phascolarctos_cinereus
ENSPKIG00000012314	fam172a	71	69.658	ENSPCOG00000024072	FAM172A	93	69.658	Propithecus_coquereli
ENSPKIG00000012314	fam172a	71	71.852	ENSRNOG00000013844	Fam172a	99	71.852	Rattus_norvegicus
ENSPKIG00000012314	fam172a	54	70.056	ENSRBIG00000028680	-	82	67.568	Rhinopithecus_bieti
ENSPKIG00000012314	fam172a	72	70.545	ENSRROG00000023807	FAM172A	92	71.587	Rhinopithecus_roxellana
ENSPKIG00000012314	fam172a	96	83.516	ENSSBOG00000019860	FAM172A	97	73.153	Saimiri_boliviensis_boliviensis
ENSPKIG00000012314	fam172a	100	74.757	ENSSHAG00000013743	FAM172A	97	71.182	Sarcophilus_harrisii
ENSPKIG00000012314	fam172a	100	76.699	ENSSPUG00000008161	FAM172A	97	72.772	Sphenodon_punctatus
ENSPKIG00000012314	fam172a	87	91.228	ENSSSCG00000027608	FAM172A	97	74.722	Sus_scrofa
ENSPKIG00000012314	fam172a	74	57.895	ENSTGUG00000013623	-	100	41.124	Taeniopygia_guttata
ENSPKIG00000012314	fam172a	91	91.045	ENSTGUG00000000715	FAM172A	97	75.543	Taeniopygia_guttata
ENSPKIG00000012314	fam172a	73	83.529	ENSTNIG00000009902	fam172a	100	64.157	Tetraodon_nigroviridis
ENSPKIG00000012314	fam172a	100	73.786	ENSTTRG00000001521	FAM172A	97	71.429	Tursiops_truncatus
ENSPKIG00000012314	fam172a	96	83.516	ENSUMAG00000005442	FAM172A	99	73.585	Ursus_maritimus
ENSPKIG00000012314	fam172a	91	92.647	ENSVVUG00000022112	FAM172A	99	72.800	Vulpes_vulpes
ENSPKIG00000012314	fam172a	98	75.000	ENSXETG00000011592	fam172a	94	72.796	Xenopus_tropicalis
ENSPKIG00000012314	fam172a	96	41.910	ENSXETG00000033027	-	99	41.299	Xenopus_tropicalis